RNA–Protein interactions for RNA: ENSMUST00000098548.7

Scn1b-201, Transcript of Sodium channel subunit beta-1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Scn1b, Length 1,573 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1b-201ENSMUST00000098548 Adcy7P51829 1099 aa24.5■■□□□ 1.51
Scn1b-201ENSMUST00000098548 Cyp11b1Q3TG86 501 aa24.5■■□□□ 1.51
Scn1b-201ENSMUST00000098548 Mpzl3Q3V3F6 237 aa24.5■■□□□ 1.51
Scn1b-201ENSMUST00000098548 Cep112Q5PR68 954 aa24.5■■□□□ 1.51
Scn1b-201ENSMUST00000098548 Klra7Q60654 280 aa24.5■■□□□ 1.51
Scn1b-201ENSMUST00000098548 Hspa4Q61316 841 aa24.5■■□□□ 1.51
Scn1b-201ENSMUST00000098548 Krt15Q61414 452 aa24.5■■□□□ 1.51
Scn1b-201ENSMUST00000098548 Hspbp1Q99P31 357 aaKnown RBP24.5■■□□□ 1.51
Scn1b-201ENSMUST00000098548 VasnQ9CZT5 673 aa24.5■■□□□ 1.51
Scn1b-201ENSMUST00000098548 Prl2b1Q9DAZ2 228 aa24.5■■□□□ 1.51
Scn1b-201ENSMUST00000098548 B4galt5Q9JMK0 388 aa24.5■■□□□ 1.51
Scn1b-201ENSMUST00000098548 Slc12a7Q9WVL3 1083 aa24.5■■□□□ 1.51
Scn1b-201ENSMUST00000098548 Clca3bE9PUL3 1044 aa24.49■■□□□ 1.51
Scn1b-201ENSMUST00000098548 Men1O88559 611 aaKnown RBP24.49■■□□□ 1.51
Scn1b-201ENSMUST00000098548 EpoP07321 192 aa24.49■■□□□ 1.51
Scn1b-201ENSMUST00000098548 Ppm1aP49443 382 aa24.49■■□□□ 1.51
Scn1b-201ENSMUST00000098548 Pafah1b1P63005 410 aaKnown RBP24.49■■□□□ 1.51
Scn1b-201ENSMUST00000098548 CtcfQ61164 736 aaKnown RBP24.49■■□□□ 1.51
Scn1b-201ENSMUST00000098548 Lrig3Q6P1C6 1117 aa24.49■■□□□ 1.51
Scn1b-201ENSMUST00000098548 Suz12Q80U70 741 aaKnown RBP24.49■■□□□ 1.51
Scn1b-201ENSMUST00000098548 Tmco3Q8BH01 678 aa24.49■■□□□ 1.51
Scn1b-201ENSMUST00000098548 Snip1Q8BIZ6 383 aaKnown RBP24.49■■□□□ 1.51
Scn1b-201ENSMUST00000098548 ClmnQ8C5W0 1052 aa24.49■■□□□ 1.51
Scn1b-201ENSMUST00000098548 Ppfibp1Q8C8U0 969 aaKnown RBP24.49■■□□□ 1.51
Scn1b-201ENSMUST00000098548 PdxkQ8K183 312 aa24.49■■□□□ 1.51
Scn1b-201ENSMUST00000098548 Lysmd1Q9D0E3 226 aa24.49■■□□□ 1.51
Scn1b-201ENSMUST00000098548 Capn10Q9ESK3 666 aa24.49■■□□□ 1.51
Scn1b-201ENSMUST00000098548 Klra17Q9JMA4 273 aa24.49■■□□□ 1.51
Scn1b-201ENSMUST00000098548 Tle2Q9WVB2 767 aa24.49■■□□□ 1.51
Scn1b-201ENSMUST00000098548 Gm45861A0A1B0GRY3 1923 aa24.49■■□□□ 1.51
Scn1b-201ENSMUST00000098548 Gm3383J3QQ59 259 aa24.48■■□□□ 1.51
Scn1b-201ENSMUST00000098548 Tulp2P46686 562 aa24.48■■□□□ 1.51
Scn1b-201ENSMUST00000098548 LxnP70202 222 aa24.48■■□□□ 1.51
Scn1b-201ENSMUST00000098548 Cd37Q61470 281 aa24.48■■□□□ 1.51
Scn1b-201ENSMUST00000098548 Trim25Q61510 634 aaKnown RBP24.48■■□□□ 1.51
Scn1b-201ENSMUST00000098548 Cd180Q62192 661 aa24.48■■□□□ 1.51
Scn1b-201ENSMUST00000098548 Cep70Q6IQY5 616 aa24.48■■□□□ 1.51
Scn1b-201ENSMUST00000098548 Tmem161bQ8C2L6 487 aa24.48■■□□□ 1.51
Scn1b-201ENSMUST00000098548 Matr3Q8K310 846 aaKnown RBP24.48■■□□□ 1.51
Scn1b-201ENSMUST00000098548 Rnf6Q9DBU5 667 aa24.48■■□□□ 1.51
Scn1b-201ENSMUST00000098548 Rpf2Q9JJ80 306 aaKnown RBP24.48■■□□□ 1.51
Scn1b-201ENSMUST00000098548 Cnga3Q9JJZ8 631 aa24.48■■□□□ 1.51
Scn1b-201ENSMUST00000098548 ChmQ9QXG2 665 aa24.48■■□□□ 1.51
Scn1b-201ENSMUST00000098548 Ralgapa2A3KGS3 1872 aa24.48■■□□□ 1.51
Scn1b-201ENSMUST00000098548 Taf1Q80UV9 1891 aa24.47■■□□□ 1.51
Scn1b-201ENSMUST00000098548 Cdr2lA2A6T1 465 aa24.47■■□□□ 1.51
Scn1b-201ENSMUST00000098548 Gm1758F6VZZ1 202 aa24.47■■□□□ 1.51
Scn1b-201ENSMUST00000098548 Serpinb3aG3X9V8 387 aa24.47■■□□□ 1.51
Scn1b-201ENSMUST00000098548 Kng1O08677 661 aa24.47■■□□□ 1.51
Scn1b-201ENSMUST00000098548 Wnt7bP28047 349 aa24.47■■□□□ 1.51
Scn1b-201ENSMUST00000098548 PrkcbP68404 671 aa24.47■■□□□ 1.51
Scn1b-201ENSMUST00000098548 Cct6aP80317 531 aaKnown RBP24.47■■□□□ 1.51
Scn1b-201ENSMUST00000098548 Uri1Q3TLD5 531 aa24.47■■□□□ 1.51
Scn1b-201ENSMUST00000098548 Parp3Q3ULW8 533 aa24.47■■□□□ 1.51
Scn1b-201ENSMUST00000098548 NntQ61941 1086 aaKnown RBP24.47■■□□□ 1.51
Scn1b-201ENSMUST00000098548 Cndp2Q9D1A2 475 aaKnown RBP24.47■■□□□ 1.51
Scn1b-201ENSMUST00000098548 Baz2bA2AUY4 2123 aa24.47■■□□□ 1.51
Scn1b-201ENSMUST00000098548 Vmn2r87E9PZX4 848 aa24.46■■□□□ 1.51
Scn1b-201ENSMUST00000098548 DgkkE9Q7N4 1118 aa24.46■■□□□ 1.51
Scn1b-201ENSMUST00000098548 Gnrh1P13562 90 aa24.46■■□□□ 1.51
Scn1b-201ENSMUST00000098548 GcP21614 476 aa24.46■■□□□ 1.51
Scn1b-201ENSMUST00000098548 Scp2P32020 547 aaKnown RBP24.46■■□□□ 1.51
Scn1b-201ENSMUST00000098548 Psmb7P70195 277 aa24.46■■□□□ 1.51
Scn1b-201ENSMUST00000098548 Ano7Q14AT5 859 aa24.46■■□□□ 1.51
Scn1b-201ENSMUST00000098548 Dzip3Q7TPV2 1204 aa24.46■■□□□ 1.51
Scn1b-201ENSMUST00000098548 Tcaf1Q8BNE1 924 aa24.46■■□□□ 1.51
Scn1b-201ENSMUST00000098548 Iqcb1Q8BP00 598 aa24.46■■□□□ 1.51
Scn1b-201ENSMUST00000098548 Vps18Q8R307 973 aa24.46■■□□□ 1.51
Scn1b-201ENSMUST00000098548 Trpv6Q91WD2 767 aa24.46■■□□□ 1.51
Scn1b-201ENSMUST00000098548 Zfp623Q9CY99 499 aa24.46■■□□□ 1.51
Scn1b-201ENSMUST00000098548 Vps33aQ9D2N9 598 aa24.46■■□□□ 1.51
Scn1b-201ENSMUST00000098548 Dnajb7Q9QYI8 312 aa24.46■■□□□ 1.51
Scn1b-201ENSMUST00000098548 Msl3Q9WVG9 525 aa24.46■■□□□ 1.51
Scn1b-201ENSMUST00000098548 Wdr46Q9Z0H1 622 aaKnown RBP24.46■■□□□ 1.51
Scn1b-201ENSMUST00000098548 Mettl1Q9Z120 268 aa24.46■■□□□ 1.51
Scn1b-201ENSMUST00000098548 Vmn2r55G3UWZ4 781 aa24.46■■□□□ 1.51
Scn1b-201ENSMUST00000098548 Vmn2r53L7N473 806 aa24.46■■□□□ 1.51
Scn1b-201ENSMUST00000098548 Mmp3P28862 477 aa24.46■■□□□ 1.51
Scn1b-201ENSMUST00000098548 Oas1fQ14AZ4 364 aa24.46■■□□□ 1.51
Scn1b-201ENSMUST00000098548 Echdc2Q3TLP5 296 aa24.46■■□□□ 1.51
Scn1b-201ENSMUST00000098548 Nat8lQ3UGX3 299 aa24.46■■□□□ 1.51
Scn1b-201ENSMUST00000098548 Atp13a4Q5XF90 1193 aa24.46■■□□□ 1.51
Scn1b-201ENSMUST00000098548 Mapk15Q80Y86 549 aa24.46■■□□□ 1.51
Scn1b-201ENSMUST00000098548 Cdc23Q8BGZ4 597 aa24.46■■□□□ 1.51
Scn1b-201ENSMUST00000098548 Olfml3Q8BK62 406 aa24.46■■□□□ 1.51
Scn1b-201ENSMUST00000098548 Rab11fip4Q8BQP8 635 aa24.46■■□□□ 1.51
Scn1b-201ENSMUST00000098548 Lrch3Q8BVU0 778 aa24.46■■□□□ 1.51
Scn1b-201ENSMUST00000098548 Olig1Q9JKN5 260 aa24.46■■□□□ 1.51
Scn1b-201ENSMUST00000098548 Fam109bQ14B98 259 aa24.45■■□□□ 1.5
Scn1b-201ENSMUST00000098548 Fam198aQ3UY90 562 aa24.45■■□□□ 1.5
Scn1b-201ENSMUST00000098548 Lin9Q8C735 542 aa24.45■■□□□ 1.5
Scn1b-201ENSMUST00000098548 Ago3Q8CJF9 860 aa24.45■■□□□ 1.5
Scn1b-201ENSMUST00000098548 Olfr805Q8VFI4 319 aa24.45■■□□□ 1.5
Scn1b-201ENSMUST00000098548 Ppp1r3aQ99MR9 1089 aa24.45■■□□□ 1.5
Scn1b-201ENSMUST00000098548 Sdr42e1Q9D665 394 aa24.45■■□□□ 1.5
Scn1b-201ENSMUST00000098548 Mzb1Q9D8I1 188 aa24.45■■□□□ 1.5
Scn1b-201ENSMUST00000098548 Atp13a1Q9EPE9 1200 aaKnown RBP24.45■■□□□ 1.5
Scn1b-201ENSMUST00000098548 Prpf40aQ9R1C7 953 aaKnown RBP24.45■■□□□ 1.5
Scn1b-201ENSMUST00000098548 Otud7bB2RUR8 840 aa24.44■■□□□ 1.5
Scn1b-201ENSMUST00000098548 Efna5O08543 228 aa24.44■■□□□ 1.5
Retrieved 100 of 22,080 RNA–protein pairs in 20.6 ms