RNA–Protein interactions for RNA: ENSMUST00000076265.12

Upf3b-201, Transcript of UPF3 regulator of nonsense transcripts homolog B (yeast), mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Upf3b, Length 2,344 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3b-201ENSMUST00000076265 Ddah1Q9CWS0 285 aa9.76□□□□□ -0.85
Upf3b-201ENSMUST00000076265 Khdc3Q9CWU5 440 aa9.76□□□□□ -0.85
Upf3b-201ENSMUST00000076265 RabggtaQ9JHK4 567 aa9.76□□□□□ -0.85
Upf3b-201ENSMUST00000076265 Nfat5Q9WV30 1534 aa9.76□□□□□ -0.85
Upf3b-201ENSMUST00000076265 Dcst2A0A140LIJ0 701 aa9.76□□□□□ -0.85
Upf3b-201ENSMUST00000076265 Ttll7A4Q9F0 912 aa9.76□□□□□ -0.85
Upf3b-201ENSMUST00000076265 SelenonD3Z2R5 557 aa9.76□□□□□ -0.85
Upf3b-201ENSMUST00000076265 Nr1i2O54915 431 aa9.76□□□□□ -0.85
Upf3b-201ENSMUST00000076265 PdgfaP20033 211 aa9.76□□□□□ -0.85
Upf3b-201ENSMUST00000076265 Gfpt1P47856 697 aa9.76□□□□□ -0.85
Upf3b-201ENSMUST00000076265 Hsd17b4P51660 735 aaKnown RBP9.76□□□□□ -0.85
Upf3b-201ENSMUST00000076265 Ccna2P51943 422 aaKnown RBP9.76□□□□□ -0.85
Upf3b-201ENSMUST00000076265 Dab1P97318 588 aa9.76□□□□□ -0.85
Upf3b-201ENSMUST00000076265 CkbQ04447 381 aa9.76□□□□□ -0.85
Upf3b-201ENSMUST00000076265 Ankmy2Q3TPE9 440 aa9.76□□□□□ -0.85
Upf3b-201ENSMUST00000076265 Ttbk2Q3UVR3 1243 aa9.76□□□□□ -0.85
Upf3b-201ENSMUST00000076265 MENTQ569E4 350 aa9.76□□□□□ -0.85
Upf3b-201ENSMUST00000076265 Gpr39Q5U431 456 aa9.76□□□□□ -0.85
Upf3b-201ENSMUST00000076265 Cplx4Q80WM3 160 aa9.76□□□□□ -0.85
Upf3b-201ENSMUST00000076265 Fsd2Q8BZ52 692 aa9.76□□□□□ -0.85
Upf3b-201ENSMUST00000076265 Q8K207 121 aa9.76□□□□□ -0.85
Upf3b-201ENSMUST00000076265 Plac9Q8K262 108 aa9.76□□□□□ -0.85
Upf3b-201ENSMUST00000076265 Emilin1Q99K41 1017 aa9.76□□□□□ -0.85
Upf3b-201ENSMUST00000076265 Hps4Q99KG7 671 aa9.76□□□□□ -0.85
Upf3b-201ENSMUST00000076265 Elf2Q9JHC9 593 aa9.76□□□□□ -0.85
Upf3b-201ENSMUST00000076265 Slc26a3Q9WVC8 757 aa9.76□□□□□ -0.85
Upf3b-201ENSMUST00000076265 Shank2Q80Z38 1476 aa9.75□□□□□ -0.85
Upf3b-201ENSMUST00000076265 A0A1L1SV24 88 aa9.75□□□□□ -0.85
Upf3b-201ENSMUST00000076265 Cavin4A2AMM0 362 aa9.75□□□□□ -0.85
Upf3b-201ENSMUST00000076265 Nfx1B1AY10 1114 aaKnown RBP9.75□□□□□ -0.85
Upf3b-201ENSMUST00000076265 Lgals7O54974 136 aa9.75□□□□□ -0.85
Upf3b-201ENSMUST00000076265 IkbkgO88522 412 aa9.75□□□□□ -0.85
Upf3b-201ENSMUST00000076265 NefhP19246 1090 aa9.75□□□□□ -0.85
Upf3b-201ENSMUST00000076265 Klra1P20937 262 aa9.75□□□□□ -0.85
Upf3b-201ENSMUST00000076265 Tap1P21958 724 aa9.75□□□□□ -0.85
Upf3b-201ENSMUST00000076265 Ces1cP23953 554 aa9.75□□□□□ -0.85
Upf3b-201ENSMUST00000076265 Stmn4P63042 189 aa9.75□□□□□ -0.85
Upf3b-201ENSMUST00000076265 Traf6P70196 530 aa9.75□□□□□ -0.85
Upf3b-201ENSMUST00000076265 CpeQ00493 476 aa9.75□□□□□ -0.85
Upf3b-201ENSMUST00000076265 Q3KNL4 93 aa9.75□□□□□ -0.85
Upf3b-201ENSMUST00000076265 Q3UPC7 1272 aa9.75□□□□□ -0.85
Upf3b-201ENSMUST00000076265 Ireb2Q811J3 963 aaKnown RBP9.75□□□□□ -0.85
Upf3b-201ENSMUST00000076265 Ano10Q8BH79 659 aa9.75□□□□□ -0.85
Upf3b-201ENSMUST00000076265 Fam102bQ8BQS4 339 aa9.75□□□□□ -0.85
Upf3b-201ENSMUST00000076265 Acat2Q8CAY6 397 aa9.75□□□□□ -0.85
Upf3b-201ENSMUST00000076265 MfrpQ8K480 584 aa9.75□□□□□ -0.85
Upf3b-201ENSMUST00000076265 Ubac1Q8VDI7 409 aa9.75□□□□□ -0.85
Upf3b-201ENSMUST00000076265 Taf12Q8VE65 161 aa9.75□□□□□ -0.85
Upf3b-201ENSMUST00000076265 Pcdhgb4Q91XX6 912 aa9.75□□□□□ -0.85
Upf3b-201ENSMUST00000076265 Ppp6r3Q922D4 844 aa9.75□□□□□ -0.85
Upf3b-201ENSMUST00000076265 Nek3Q9R0A5 511 aa9.75□□□□□ -0.85
Upf3b-201ENSMUST00000076265 Psma4Q9R1P0 261 aa9.75□□□□□ -0.85
Upf3b-201ENSMUST00000076265 Kif16bB1AVY7 1312 aa9.75□□□□□ -0.85
Upf3b-201ENSMUST00000076265 Ankfn1A0A140LIW7 1083 aa9.74□□□□□ -0.85
Upf3b-201ENSMUST00000076265 Mindy4b-psA0A1W2P7H6 457 aa9.74□□□□□ -0.85
Upf3b-201ENSMUST00000076265 Wdr63B2RY71 923 aa9.74□□□□□ -0.85
Upf3b-201ENSMUST00000076265 Gm4297D3YWB7 211 aa9.74□□□□□ -0.85
Upf3b-201ENSMUST00000076265 R3hdm1E9Q9Q2 1135 aaKnown RBP9.74□□□□□ -0.85
Upf3b-201ENSMUST00000076265 Tmco2P0C1V4 183 aa9.74□□□□□ -0.85
Upf3b-201ENSMUST00000076265 Mphosph8Q3TYA6 858 aaKnown RBP9.74□□□□□ -0.85
Upf3b-201ENSMUST00000076265 Limch1Q3UH68 1057 aa9.74□□□□□ -0.85
Upf3b-201ENSMUST00000076265 Lgr6Q3UVD5 967 aa9.74□□□□□ -0.85
Upf3b-201ENSMUST00000076265 Plk5Q4FZD7 595 aa9.74□□□□□ -0.85
Upf3b-201ENSMUST00000076265 EappQ5BU09 281 aa9.74□□□□□ -0.85
Upf3b-201ENSMUST00000076265 Scube1Q6NZL8 1018 aa9.74□□□□□ -0.85
Upf3b-201ENSMUST00000076265 NostrinQ6WKZ7 506 aa9.74□□□□□ -0.85
Upf3b-201ENSMUST00000076265 Als2cr12Q8BVM7 383 aa9.74□□□□□ -0.85
Upf3b-201ENSMUST00000076265 Casp9Q8C3Q9 454 aa9.74□□□□□ -0.85
Upf3b-201ENSMUST00000076265 Tbc1d23Q8K0F1 684 aa9.74□□□□□ -0.85
Upf3b-201ENSMUST00000076265 Vmn1r214Q8R279 367 aa9.74□□□□□ -0.85
Upf3b-201ENSMUST00000076265 Znf445Q8R2V3 986 aa9.74□□□□□ -0.85
Upf3b-201ENSMUST00000076265 Prpsap2Q8R574 369 aa9.74□□□□□ -0.85
Upf3b-201ENSMUST00000076265 Ifih1Q8R5F7 1025 aa9.74□□□□□ -0.85
Upf3b-201ENSMUST00000076265 Mospd1Q8VEL0 213 aa9.74□□□□□ -0.85
Upf3b-201ENSMUST00000076265 Sntg2Q925E0 539 aa9.74□□□□□ -0.85
Upf3b-201ENSMUST00000076265 MtpapQ9D0D3 585 aaKnown RBP9.74□□□□□ -0.85
Upf3b-201ENSMUST00000076265 Dhx34Q9DBV3 1145 aa9.74□□□□□ -0.85
Upf3b-201ENSMUST00000076265 Usp14Q9JMA1 493 aaKnown RBP9.74□□□□□ -0.85
Upf3b-201ENSMUST00000076265 FetubQ9QXC1 388 aa9.74□□□□□ -0.85
Upf3b-201ENSMUST00000076265 Slc39a1Q9QZ03 324 aa9.74□□□□□ -0.85
Upf3b-201ENSMUST00000076265 Nid2O88322 1403 aa9.74□□□□□ -0.85
Upf3b-201ENSMUST00000076265 Osbpl7A2A716 963 aa9.74□□□□□ -0.85
Upf3b-201ENSMUST00000076265 Gm3259D3YUK0 475 aa9.74□□□□□ -0.85
Upf3b-201ENSMUST00000076265 Gm6205E9PZS2 359 aa9.74□□□□□ -0.85
Upf3b-201ENSMUST00000076265 Il20rbE9Q9A6 308 aa9.74□□□□□ -0.85
Upf3b-201ENSMUST00000076265 Mknk1O08605 427 aa9.74□□□□□ -0.85
Upf3b-201ENSMUST00000076265 Aff1O88573 1216 aa9.74□□□□□ -0.85
Upf3b-201ENSMUST00000076265 Trim30aP15533 496 aa9.74□□□□□ -0.85
Upf3b-201ENSMUST00000076265 Il1rapl1P59823 695 aa9.74□□□□□ -0.85
Upf3b-201ENSMUST00000076265 Sox9Q04887 507 aa9.74□□□□□ -0.85
Upf3b-201ENSMUST00000076265 Arhgef2Q60875 985 aa9.74□□□□□ -0.85
Upf3b-201ENSMUST00000076265 Prr14Q7TPN9 612 aa9.74□□□□□ -0.85
Upf3b-201ENSMUST00000076265 Gpr139Q80UC8 345 aa9.74□□□□□ -0.85
Upf3b-201ENSMUST00000076265 Efr3aQ8BG67 819 aa9.74□□□□□ -0.85
Upf3b-201ENSMUST00000076265 Cdadc1Q8BMD5 523 aa9.74□□□□□ -0.85
Upf3b-201ENSMUST00000076265 Gm6367Q8C6L9 287 aa9.74□□□□□ -0.85
Upf3b-201ENSMUST00000076265 Eps8l1Q8R5F8 716 aa9.74□□□□□ -0.85
Upf3b-201ENSMUST00000076265 Dydc2Q9D3X8 139 aa9.74□□□□□ -0.85
Upf3b-201ENSMUST00000076265 Gcc1Q9D4H2 778 aa9.74□□□□□ -0.85
Upf3b-201ENSMUST00000076265 KelQ9EQF2 713 aa9.74□□□□□ -0.85
Retrieved 100 of 22,080 RNA–protein pairs in 15.8 ms