RNA–Protein interactions for RNA: ENSMUST00000033378.12

Ebf3-201, Transcript of Transcription factor COE3, mousemouse

APPRIS P3 TSL 1 (best) BASIC

Gene Ebf3, Length 4,838 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf3-201ENSMUST00000033378 Q3KNL4 93 aa19.53■□□□□ 0.72
Ebf3-201ENSMUST00000033378 Cyfip1Q7TMB8 1253 aa19.53■□□□□ 0.72
Ebf3-201ENSMUST00000033378 Ush1gQ80T11 461 aa19.53■□□□□ 0.72
Ebf3-201ENSMUST00000033378 4932411N23RikQ8C0S0 470 aa19.53■□□□□ 0.72
Ebf3-201ENSMUST00000033378 Washc1Q8VDD8 475 aa19.53■□□□□ 0.72
Ebf3-201ENSMUST00000033378 Med21Q9CQ39 144 aa19.53■□□□□ 0.72
Ebf3-201ENSMUST00000033378 Syf2Q9D198 242 aaKnown RBP19.53■□□□□ 0.72
Ebf3-201ENSMUST00000033378 Cul3Q9JLV5 768 aa19.53■□□□□ 0.72
Ebf3-201ENSMUST00000033378 Fam129cD3YZB0 591 aa19.53■□□□□ 0.72
Ebf3-201ENSMUST00000033378 StrnO55106 780 aa19.53■□□□□ 0.72
Ebf3-201ENSMUST00000033378 Got1P05201 413 aa19.53■□□□□ 0.72
Ebf3-201ENSMUST00000033378 Ago2Q8CJG0 860 aaKnown RBP19.53■□□□□ 0.72
Ebf3-201ENSMUST00000033378 Apobec3Q99J72 440 aaKnown RBP19.53■□□□□ 0.72
Ebf3-201ENSMUST00000033378 Rbp7Q9EPC5 134 aa19.53■□□□□ 0.72
Ebf3-201ENSMUST00000033378 Apobec2Q9WV35 224 aa19.53■□□□□ 0.72
Ebf3-201ENSMUST00000033378 Shcbp1Q9Z179 668 aa19.53■□□□□ 0.72
Ebf3-201ENSMUST00000033378 Pnpla7A2AJ88 1352 aa19.53■□□□□ 0.72
Ebf3-201ENSMUST00000033378 Fkbp1aP26883 108 aaKnown RBP19.53■□□□□ 0.72
Ebf3-201ENSMUST00000033378 Rasa2P58069 847 aa19.53■□□□□ 0.72
Ebf3-201ENSMUST00000033378 Efl1Q8C0D5 1127 aa19.53■□□□□ 0.72
Ebf3-201ENSMUST00000033378 AdigQ8R400 80 aa19.53■□□□□ 0.72
Ebf3-201ENSMUST00000033378 Dkc1Q9ESX5 509 aaKnown RBP19.53■□□□□ 0.72
Ebf3-201ENSMUST00000033378 Rnf103Q9R1W3 683 aa19.53■□□□□ 0.72
Ebf3-201ENSMUST00000033378 Psmd10Q9Z2X2 231 aa19.53■□□□□ 0.72
Ebf3-201ENSMUST00000033378 Trpm1Q2TV84 1622 aa19.52■□□□□ 0.72
Ebf3-201ENSMUST00000033378 Pola2P33611 600 aa19.52■□□□□ 0.72
Ebf3-201ENSMUST00000033378 Sec23aQ01405 765 aa19.52■□□□□ 0.72
Ebf3-201ENSMUST00000033378 Phf8Q80TJ7 1023 aa19.52■□□□□ 0.72
Ebf3-201ENSMUST00000033378 Dnajc6Q80TZ3 938 aa19.52■□□□□ 0.72
Ebf3-201ENSMUST00000033378 Fam20aQ8CID3 541 aa19.52■□□□□ 0.72
Ebf3-201ENSMUST00000033378 MyripQ8K3I4 856 aa19.52■□□□□ 0.72
Ebf3-201ENSMUST00000033378 OafQ8QZR4 282 aa19.52■□□□□ 0.72
Ebf3-201ENSMUST00000033378 Dppa3Q8QZY3 150 aa19.52■□□□□ 0.72
Ebf3-201ENSMUST00000033378 Styxl1Q9DAR2 321 aa19.52■□□□□ 0.72
Ebf3-201ENSMUST00000033378 Tnni1Q9WUZ5 187 aa19.52■□□□□ 0.72
Ebf3-201ENSMUST00000033378 Aox3G3X982 1335 aa19.52■□□□□ 0.72
Ebf3-201ENSMUST00000033378 Ext2P70428 718 aa19.52■□□□□ 0.72
Ebf3-201ENSMUST00000033378 RnaselQ05921 735 aa19.52■□□□□ 0.72
Ebf3-201ENSMUST00000033378 Rufy4Q3TYX8 563 aa19.52■□□□□ 0.72
Ebf3-201ENSMUST00000033378 Kcns3Q8BQZ8 491 aa19.52■□□□□ 0.72
Ebf3-201ENSMUST00000033378 Gpc5Q8CAL5 572 aa19.52■□□□□ 0.72
Ebf3-201ENSMUST00000033378 Pop1Q8K205 1045 aa19.52■□□□□ 0.72
Ebf3-201ENSMUST00000033378 Znrd1-asQ8R0E5 213 aa19.52■□□□□ 0.72
Ebf3-201ENSMUST00000033378 Ska2Q9CR46 120 aa19.52■□□□□ 0.72
Ebf3-201ENSMUST00000033378 Anxa9Q9JHQ0 345 aa19.52■□□□□ 0.72
Ebf3-201ENSMUST00000033378 Gm11983V9GXS8 105 aa19.52■□□□□ 0.72
Ebf3-201ENSMUST00000033378 Tecpr2Q3UH45 1423 aa19.52■□□□□ 0.72
Ebf3-201ENSMUST00000033378 Naaladl2A0A0N4SUJ3 795 aa19.52■□□□□ 0.71
Ebf3-201ENSMUST00000033378 Plekha5E9Q6H8 1269 aa19.52■□□□□ 0.71
Ebf3-201ENSMUST00000033378 Pja1O55176 578 aa19.52■□□□□ 0.71
Ebf3-201ENSMUST00000033378 Fam102aQ78T81 392 aa19.52■□□□□ 0.71
Ebf3-201ENSMUST00000033378 Epc2Q8C0I4 808 aa19.52■□□□□ 0.71
Ebf3-201ENSMUST00000033378 Tmem132cQ8CEF9 1099 aa19.52■□□□□ 0.71
Ebf3-201ENSMUST00000033378 Sox30Q8CGW4 782 aa19.52■□□□□ 0.71
Ebf3-201ENSMUST00000033378 Tgif2lx2Q8K5B9 231 aa19.52■□□□□ 0.71
Ebf3-201ENSMUST00000033378 Pcdha10Q91Y20 946 aa19.52■□□□□ 0.71
Ebf3-201ENSMUST00000033378 SmtnQ921U8 923 aa19.52■□□□□ 0.71
Ebf3-201ENSMUST00000033378 Rabl3Q9D4V7 236 aa19.52■□□□□ 0.71
Ebf3-201ENSMUST00000033378 Slc22a3Q9WTW5 551 aa19.52■□□□□ 0.71
Ebf3-201ENSMUST00000033378 Krt32Q62168 407 aa19.51■□□□□ 0.71
Ebf3-201ENSMUST00000033378 CntrobQ8CB62 887 aa19.51■□□□□ 0.71
Ebf3-201ENSMUST00000033378 Cdk9Q99J95 372 aa19.51■□□□□ 0.71
Ebf3-201ENSMUST00000033378 Kdm8Q9CXT6 414 aa19.51■□□□□ 0.71
Ebf3-201ENSMUST00000033378 Cyp2s1Q9DBX6 501 aa19.51■□□□□ 0.71
Ebf3-201ENSMUST00000033378 Zfp266E9Q2S7 604 aa19.51■□□□□ 0.71
Ebf3-201ENSMUST00000033378 9130409I23RikQ3TS87 320 aa19.51■□□□□ 0.71
Ebf3-201ENSMUST00000033378 Tdpoz2Q717B2 364 aa19.51■□□□□ 0.71
Ebf3-201ENSMUST00000033378 Drd5Q8BLD9 478 aa19.51■□□□□ 0.71
Ebf3-201ENSMUST00000033378 Rims2Q9EQZ7 1530 aa19.51■□□□□ 0.71
Ebf3-201ENSMUST00000033378 Kiaa0556Q8C753 1610 aa19.51■□□□□ 0.71
Ebf3-201ENSMUST00000033378 Patl2A2ARM1 529 aa19.51■□□□□ 0.71
Ebf3-201ENSMUST00000033378 CflarO35732 481 aa19.51■□□□□ 0.71
Ebf3-201ENSMUST00000033378 Lsg1Q3UM18 644 aaKnown RBP19.51■□□□□ 0.71
Ebf3-201ENSMUST00000033378 Ipo5Q8BKC5 1097 aaKnown RBP19.51■□□□□ 0.71
Ebf3-201ENSMUST00000033378 Hdac11Q91WA3 347 aa19.51■□□□□ 0.71
Ebf3-201ENSMUST00000033378 Sf3b3Q921M3 1217 aaKnown RBP19.51■□□□□ 0.71
Ebf3-201ENSMUST00000033378 Def8Q99J78 448 aa19.51■□□□□ 0.71
Ebf3-201ENSMUST00000033378 Scyl3Q9DBQ7 735 aa19.51■□□□□ 0.71
Ebf3-201ENSMUST00000033378 SfnO70456 248 aaKnown RBP19.51■□□□□ 0.71
Ebf3-201ENSMUST00000033378 Wdr36Q3TAQ9 899 aaKnown RBP19.51■□□□□ 0.71
Ebf3-201ENSMUST00000033378 Ssxb5Q6XAS2 159 aa19.51■□□□□ 0.71
Ebf3-201ENSMUST00000033378 Zfp454Q80Y34 536 aa19.51■□□□□ 0.71
Ebf3-201ENSMUST00000033378 HlfQ8BW74 295 aa19.51■□□□□ 0.71
Ebf3-201ENSMUST00000033378 Dcun1d2Q8BZJ7 259 aa19.51■□□□□ 0.71
Ebf3-201ENSMUST00000033378 Ttc22Q8C159 568 aa19.51■□□□□ 0.71
Ebf3-201ENSMUST00000033378 Eif2b5Q8CHW4 717 aa19.51■□□□□ 0.71
Ebf3-201ENSMUST00000033378 Snrnp27Q8K194 155 aa19.51■□□□□ 0.71
Ebf3-201ENSMUST00000033378 Polr3fQ921X6 316 aa19.51■□□□□ 0.71
Ebf3-201ENSMUST00000033378 Slc5a5Q99PN0 618 aa19.51■□□□□ 0.71
Ebf3-201ENSMUST00000033378 Slc26a4Q9R155 780 aa19.51■□□□□ 0.71
Ebf3-201ENSMUST00000033378 Ccdc194A0A140LIT1 234 aa19.5■□□□□ 0.71
Ebf3-201ENSMUST00000033378 Tubgcp3P58854 905 aa19.5■□□□□ 0.71
Ebf3-201ENSMUST00000033378 Rpusd2Q149F1 553 aa19.5■□□□□ 0.71
Ebf3-201ENSMUST00000033378 Edem3Q2HXL6 931 aa19.5■□□□□ 0.71
Ebf3-201ENSMUST00000033378 PRAG1Q571I4 1179 aa19.5■□□□□ 0.71
Ebf3-201ENSMUST00000033378 Stambpl1Q76N33 436 aa19.5■□□□□ 0.71
Ebf3-201ENSMUST00000033378 Ip6k2Q80V72 448 aa19.5■□□□□ 0.71
Ebf3-201ENSMUST00000033378 Dusp19Q8K4T5 220 aa19.5■□□□□ 0.71
Ebf3-201ENSMUST00000033378 Them5Q9CQJ0 248 aa19.5■□□□□ 0.71
Ebf3-201ENSMUST00000033378 Cyp4f17G3UW78 524 aa19.5■□□□□ 0.71
Retrieved 100 of 22,080 RNA–protein pairs in 19.3 ms