RNA–Protein interactions for RNA: snR55

snR55, Transcript of C/D box small nucleolar RNA (snoRNA), yeastyeast

Gene snR55, Length 98 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR55snR55 RPL6BP05739 176 aaKnown RBP-0.19□□□□□ -2.44
snR55snR55 DDI2P0CH63 225 aa-0.19□□□□□ -2.44
snR55snR55 DDI3P0CH64 225 aa-0.19□□□□□ -2.44
snR55snR55 VTC1P40046 129 aaRIP-Chip data-0.19□□□□□ -2.44not detected
snR55snR55 PRM10P42946 383 aa-0.19□□□□□ -2.44
snR55snR55 SMD3P43321 101 aaKnown RBP-0.19□□□□□ -2.44
snR55snR55 YGR016WP53209 190 aa-0.19□□□□□ -2.44
snR55snR55 RPL6AQ02326 176 aaKnown RBP-0.19□□□□□ -2.44
snR55snR55 RSM10Q03201 203 aa-0.19□□□□□ -2.44
snR55snR55 PRM15Q03262 622 aa-0.19□□□□□ -2.44
snR55snR55 MRPS8Q03799 155 aa-0.19□□□□□ -2.44
snR55snR55 TAZ1Q06510 381 aa-0.19□□□□□ -2.44
snR55snR55 SMT3Q12306 101 aaKnown RBP-0.19□□□□□ -2.44
snR55snR55 GDS1P41913 522 aa-0.2□□□□□ -2.44
snR55snR55 RPA34P47006 233 aaPredicted RBP-0.2□□□□□ -2.44
snR55snR55 YML6P51998 286 aa-0.2□□□□□ -2.44
snR55snR55 FMP41P53889 259 aaKnown RBP-0.2□□□□□ -2.44
snR55snR55 SUB1P54000 292 aaKnown RBP-0.2□□□□□ -2.44
snR55snR55 PEX10Q05568 337 aa-0.2□□□□□ -2.44
snR55snR55 STE3P06783 470 aa-0.21□□□□□ -2.44
snR55snR55 COS2P0CX12 379 aa-0.21□□□□□ -2.44
snR55snR55 COS3P0CX13 379 aa-0.21□□□□□ -2.44
snR55snR55 ZRT1P32804 376 aa-0.21□□□□□ -2.44
snR55snR55 YHR022CP38763 256 aa-0.21□□□□□ -2.44
snR55snR55 YHI9P38765 294 aa-0.21□□□□□ -2.44
snR55snR55 OKP1P53298 406 aa-0.21□□□□□ -2.44
snR55snR55 SLH1P53327 1967 aaKnown RBP-0.22□□□□□ -2.44
snR55snR55 MNE1P24720 663 aa-0.22□□□□□ -2.44
snR55snR55 HMT1P38074 348 aa-0.22□□□□□ -2.44
snR55snR55 GDT1P38301 280 aaPredicted RBP-0.22□□□□□ -2.44
snR55snR55 INA22P40576 216 aa-0.22□□□□□ -2.44
snR55snR55 SWC4P53201 476 aa-0.22□□□□□ -2.44
snR55snR55 YML018CQ03730 393 aa-0.22□□□□□ -2.44
snR55snR55 LOA1Q06508 300 aa-0.22□□□□□ -2.44
snR55snR55 MEU1Q07938 337 aaKnown RBP RIP-Chip data-0.22□□□□□ -2.44not detected
snR55snR55 YOR114WQ12219 294 aa-0.22□□□□□ -2.44
snR55snR55 YDR262WQ12331 272 aa-0.22□□□□□ -2.44
snR55snR55 RNP1P32385 249 aa-0.23□□□□□ -2.45
snR55snR55 YKL162CP36052 402 aa-0.23□□□□□ -2.45
snR55snR55 ADH5P38113 351 aaKnown RBP-0.23□□□□□ -2.45
snR55snR55 PHO88P38264 188 aaPredicted RBP-0.23□□□□□ -2.45
snR55snR55 YGR168CP53293 376 aa-0.23□□□□□ -2.45
snR55snR55 VPS9P54787 451 aa-0.23□□□□□ -2.45
snR55snR55 RPS3P05750 240 aaKnown RBP-0.24□□□□□ -2.45
snR55snR55 RAD3P06839 778 aa-0.24□□□□□ -2.45
snR55snR55 NSP1P14907 823 aaKnown RBP-0.24□□□□□ -2.45
snR55snR55 TEM1P38987 245 aa-0.24□□□□□ -2.45
snR55snR55 YJL028WP47062 111 aa-0.24□□□□□ -2.45
snR55snR55 ERG25P53045 309 aa-0.24□□□□□ -2.45
snR55snR55 NIF3P53081 288 aa-0.24□□□□□ -2.45
snR55snR55 MPA43P53583 542 aaPredicted RBP-0.24□□□□□ -2.45
snR55snR55 YNL146WP53906 100 aa-0.24□□□□□ -2.45
snR55snR55 BUD25P85052 153 aa-0.24□□□□□ -2.45
snR55snR55 DPP1Q05521 289 aa-0.24□□□□□ -2.45
snR55snR55 RPL31AP0C2H8 113 aaKnown RBP-0.25□□□□□ -2.45
snR55snR55 VMA8P32610 256 aaKnown RBP-0.25□□□□□ -2.45
snR55snR55 GDI1P39958 451 aaKnown RBP-0.25□□□□□ -2.45
snR55snR55 AGX1P43567 385 aa-0.25□□□□□ -2.45
snR55snR55 SDC1Q03323 175 aa-0.25□□□□□ -2.45
snR55snR55 MDH3P32419 343 aaKnown RBP RIP-Chip data-0.26□□□□□ -2.45not detected
snR55snR55 MPP10P47083 593 aaKnown RBP-0.26□□□□□ -2.45
snR55snR55 ATO3Q12359 275 aa-0.26□□□□□ -2.45
snR55snR55 YPR064WQ12492 139 aa-0.26□□□□□ -2.45
snR55snR55 YPL119C-AQ3E751 87 aa-0.26□□□□□ -2.45
snR55snR55 FLO9P39712 1322 aa-0.27□□□□□ -2.45
snR55snR55 PET494P07390 489 aaPredicted RBP-0.27□□□□□ -2.45
snR55snR55 YHR032W-AP0C5N6 59 aa-0.27□□□□□ -2.45
snR55snR55 GPA2P10823 449 aa-0.27□□□□□ -2.45
snR55snR55 SUA5P32579 426 aa-0.27□□□□□ -2.45
snR55snR55 MAL32P38158 584 aa-0.27□□□□□ -2.45
snR55snR55 ECM13P38195 257 aa-0.27□□□□□ -2.45
snR55snR55 RCY1P39531 840 aa-0.27□□□□□ -2.45
snR55snR55 OST2P46964 130 aa-0.27□□□□□ -2.45
snR55snR55 MAL12P53341 584 aa-0.27□□□□□ -2.45
snR55snR55 YPR1Q12458 312 aa-0.27□□□□□ -2.45
snR55snR55 PRP8P33334 2413 aaKnown RBP-0.27□□□□□ -2.45
snR55snR55 AQY2P0CD90 149 aa-0.28□□□□□ -2.45
snR55snR55 SWI3P32591 825 aa-0.28□□□□□ -2.45
snR55snR55 LRP1P38801 184 aaKnown RBP-0.28□□□□□ -2.45
snR55snR55 CTR2P38865 189 aa-0.28□□□□□ -2.45
snR55snR55 SEC28P40509 296 aaKnown RBP-0.28□□□□□ -2.45
snR55snR55 YNR062CP53748 327 aa-0.28□□□□□ -2.45
snR55snR55 UBC7Q02159 165 aa-0.28□□□□□ -2.45
snR55snR55 VPS60Q03390 229 aa-0.28□□□□□ -2.45
snR55snR55 EMI1Q04406 187 aa-0.28□□□□□ -2.45
snR55snR55 BOP2Q06150 570 aa-0.28□□□□□ -2.45
snR55snR55 APC9Q12107 265 aa-0.28□□□□□ -2.45
snR55snR55 RRP42Q12277 265 aaPredicted RBP-0.28□□□□□ -2.45
snR55snR55 IZH4Q99393 312 aa-0.28□□□□□ -2.45
snR55snR55 RPL18AP0CX49 186 aaKnown RBP-0.29□□□□□ -2.46
snR55snR55 RPL18BP0CX50 186 aaKnown RBP-0.29□□□□□ -2.46
snR55snR55 RPS0AP32905 252 aaKnown RBP-0.29□□□□□ -2.46
snR55snR55 RXT2P38255 430 aa-0.29□□□□□ -2.46
snR55snR55 YEL067CP39978 195 aa-0.29□□□□□ -2.46
snR55snR55 ICE2P40499 491 aa-0.29□□□□□ -2.46
snR55snR55 YJR079WP47126 109 aa-0.29□□□□□ -2.46
snR55snR55 SML1Q04964 104 aa-0.29□□□□□ -2.46
snR55snR55 PBP4Q07362 185 aaKnown RBP-0.29□□□□□ -2.46
snR55snR55 PST1Q12355 444 aa-0.29□□□□□ -2.46
snR55snR55 UGA1P17649 471 aa-0.3□□□□□ -2.46
Retrieved 100 of 5,963 RNA–protein pairs in 57.9 ms