RNA–Protein interactions for RNA: YPL115C

BEM3, Transcript of Rho GTPase activating protein (RhoGAP), yeast

Gene BEM3, Length 3,387 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
BEM3	YPL115C	TAF6	P53040	516 aa		0.43	□□□□□ -2.34
BEM3	YPL115C	YGR015C	P53208	328 aa		0.43	□□□□□ -2.34
BEM3	YPL115C	EBS1	Q03466	884 aa	Known RBP	0.43	□□□□□ -2.34
BEM3	YPL115C	UBX2	Q04228	584 aa		0.43	□□□□□ -2.34
BEM3	YPL115C	RPN6	Q12377	434 aa		0.43	□□□□□ -2.34
BEM3	YPL115C	FUS3	P16892	353 aa	Known RBP	0.42	□□□□□ -2.34
BEM3	YPL115C	RDS1	P25611	832 aa		0.42	□□□□□ -2.34
BEM3	YPL115C	LDS1	P31379	325 aa		0.42	□□□□□ -2.34
BEM3	YPL115C	RPC25	P35718	212 aa		0.42	□□□□□ -2.34
BEM3	YPL115C	YKL063C	P35725	167 aa		0.42	□□□□□ -2.34
BEM3	YPL115C	IST2	P38250	946 aa		0.42	□□□□□ -2.34
BEM3	YPL115C	SMC2	P38989	1170 aa	Known RBP	0.42	□□□□□ -2.34
BEM3	YPL115C	BDH1	P39714	382 aa		0.42	□□□□□ -2.34
BEM3	YPL115C	UTP25	P40498	721 aa	Known RBP	0.42	□□□□□ -2.34
BEM3	YPL115C	COQ5	P49017	307 aa		0.42	□□□□□ -2.34
BEM3	YPL115C	SPP2	Q02521	185 aa		0.42	□□□□□ -2.34
BEM3	YPL115C	INP2	Q03824	705 aa		0.42	□□□□□ -2.34
BEM3	YPL115C	COX20	Q04935	205 aa		0.42	□□□□□ -2.34
BEM3	YPL115C	RRS1	Q08746	203 aa	Known RBP	0.42	□□□□□ -2.34
BEM3	YPL115C	YPL264C	Q08980	353 aa		0.42	□□□□□ -2.34
BEM3	YPL115C	LDB17	Q12342	491 aa		0.42	□□□□□ -2.34
BEM3	YPL115C	PRP46	Q12417	451 aa	Predicted RBP	0.42	□□□□□ -2.34
BEM3	YPL115C	YPL119C-A	Q3E751	87 aa		0.42	□□□□□ -2.34
BEM3	YPL115C	NBL1	Q3E7Y6	73 aa		0.42	□□□□□ -2.34
BEM3	YPL115C	FMP27	Q06179	2628 aa		0.42	□□□□□ -2.34
BEM3	YPL115C	MSS116	P15424	664 aa	Known RBP	0.42	□□□□□ -2.34
BEM3	YPL115C	SPS19	P32573	292 aa	Known RBP	0.42	□□□□□ -2.34
BEM3	YPL115C	ALK2	P32789	676 aa	Predicted RBP	0.42	□□□□□ -2.34
BEM3	YPL115C	TPO5	P36029	618 aa		0.42	□□□□□ -2.34
BEM3	YPL115C	MAL32	P38158	584 aa		0.42	□□□□□ -2.34
BEM3	YPL115C	GDT1	P38301	280 aa	Predicted RBP	0.42	□□□□□ -2.34
BEM3	YPL115C	KRE29	P40026	464 aa		0.42	□□□□□ -2.34
BEM3	YPL115C	NIF3	P53081	288 aa		0.42	□□□□□ -2.34
BEM3	YPL115C	MAL12	P53341	584 aa		0.42	□□□□□ -2.34
BEM3	YPL115C	ASI3	P53983	676 aa		0.42	□□□□□ -2.34
BEM3	YPL115C	VPS9	P54787	451 aa		0.42	□□□□□ -2.34
BEM3	YPL115C	YPL113C	Q02961	396 aa		0.42	□□□□□ -2.34
BEM3	YPL115C	MIM1	Q08176	113 aa		0.42	□□□□□ -2.34
BEM3	YPL115C	ALE1	Q08548	619 aa		0.42	□□□□□ -2.34
BEM3	YPL115C	TAF10	Q12030	206 aa		0.42	□□□□□ -2.34
BEM3	YPL115C	SFG1	Q12507	346 aa		0.42	□□□□□ -2.34
BEM3	YPL115C	HIS1	P00498	297 aa	Known RBP	0.42	□□□□□ -2.34
BEM3	YPL115C	GCD2	P12754	651 aa	Predicted RBP	0.42	□□□□□ -2.34
BEM3	YPL115C	VMA2	P16140	517 aa	Known RBP	0.42	□□□□□ -2.34
BEM3	YPL115C	HPR1	P17629	752 aa	Known RBP	0.42	□□□□□ -2.34
BEM3	YPL115C	MET16	P18408	261 aa	Predicted RBP	0.42	□□□□□ -2.34
BEM3	YPL115C	POF1	P25576	258 aa		0.42	□□□□□ -2.34
BEM3	YPL115C	EFB1	P32471	206 aa	Known RBP	0.42	□□□□□ -2.34
BEM3	YPL115C	SHE3	P38272	425 aa	Known RBP	0.42	□□□□□ -2.34
BEM3	YPL115C	BIG1	P38813	335 aa		0.42	□□□□□ -2.34
BEM3	YPL115C	SLM1	P40485	686 aa		0.42	□□□□□ -2.34
BEM3	YPL115C	DSK2	P48510	373 aa		0.42	□□□□□ -2.34
BEM3	YPL115C	SUR7	P54003	302 aa		0.42	□□□□□ -2.34
BEM3	YPL115C	LAP3	Q01532	483 aa	Known RBP RIP-Chip data	0.42	□□□□□ -2.34	not detected
BEM3	YPL115C	CTS2	Q06350	511 aa		0.42	□□□□□ -2.34
BEM3	YPL115C	ARV1	Q06541	321 aa		0.42	□□□□□ -2.34
BEM3	YPL115C	VAC14	Q06708	880 aa		0.42	□□□□□ -2.34
BEM3	YPL115C	PLB3	Q08108	686 aa		0.42	□□□□□ -2.34
BEM3	YPL115C	PST1	Q12355	444 aa		0.42	□□□□□ -2.34
BEM3	YPL115C	COX5A	P00424	153 aa		0.41	□□□□□ -2.34
BEM3	YPL115C	SAR1	P20606	190 aa	Known RBP	0.41	□□□□□ -2.34
BEM3	YPL115C	PRP24	P49960	444 aa	Known RBP	0.41	□□□□□ -2.34
BEM3	YPL115C	RET3	P53600	189 aa		0.41	□□□□□ -2.34
BEM3	YPL115C	YNL095C	P53932	642 aa		0.41	□□□□□ -2.34
BEM3	YPL115C	ACT1	P60010	375 aa	Known RBP	0.41	□□□□□ -2.34
BEM3	YPL115C	PEX30	Q06169	523 aa		0.41	□□□□□ -2.34
BEM3	YPL115C	APC9	Q12107	265 aa		0.41	□□□□□ -2.34
BEM3	YPL115C	YIL002W-A	Q3E7Z5	69 aa		0.41	□□□□□ -2.34
BEM3	YPL115C	SNQ2	P32568	1501 aa	Known RBP	0.41	□□□□□ -2.34
BEM3	YPL115C	CTM1	P38818	585 aa		0.41	□□□□□ -2.34
BEM3	YPL115C	ASP1	P38986	381 aa	Predicted RBP	0.41	□□□□□ -2.34
BEM3	YPL115C	GGC1	P38988	300 aa		0.41	□□□□□ -2.34
BEM3	YPL115C	COA1	P40452	197 aa		0.41	□□□□□ -2.34
BEM3	YPL115C	MIG2	P53035	382 aa		0.41	□□□□□ -2.34
BEM3	YPL115C	KAP114	P53067	1004 aa		0.41	□□□□□ -2.34
BEM3	YPL115C	SMD1	Q02260	146 aa	Predicted RBP	0.41	□□□□□ -2.34
BEM3	YPL115C	ATC1	Q04005	294 aa		0.41	□□□□□ -2.34
BEM3	YPL115C	NNT1	Q05874	261 aa		0.41	□□□□□ -2.34
BEM3	YPL115C	CDD1	Q06549	142 aa		0.41	□□□□□ -2.34
BEM3	YPL115C	VIK1	Q12045	647 aa		0.41	□□□□□ -2.34
BEM3	YPL115C	YRA1	Q12159	226 aa	Known RBP	0.41	□□□□□ -2.34
BEM3	YPL115C	SIA1	Q12212	622 aa		0.41	□□□□□ -2.34
BEM3	YPL115C	YDR262W	Q12331	272 aa		0.41	□□□□□ -2.34
BEM3	YPL115C	IES3	Q12345	250 aa		0.41	□□□□□ -2.34
BEM3	YPL115C	DCP1	Q12517	231 aa	Predicted RBP	0.41	□□□□□ -2.34
BEM3	YPL115C	OM45	P16547	393 aa		0.4	□□□□□ -2.34
BEM3	YPL115C	DAL80	P26343	269 aa		0.4	□□□□□ -2.34
BEM3	YPL115C	SRB4	P32569	687 aa		0.4	□□□□□ -2.34
BEM3	YPL115C	TIP20	P33891	701 aa		0.4	□□□□□ -2.34
BEM3	YPL115C	SKI2	P35207	1287 aa	Known RBP RIP-Chip data	0.4	□□□□□ -2.34	not detected
BEM3	YPL115C	GCD14	P46959	383 aa	Predicted RBP	0.4	□□□□□ -2.34
BEM3	YPL115C	TAD2	P47058	250 aa		0.4	□□□□□ -2.34
BEM3	YPL115C	YNL260C	P53846	198 aa		0.4	□□□□□ -2.34
BEM3	YPL115C	ALG9	P53868	555 aa	Known RBP	0.4	□□□□□ -2.34
BEM3	YPL115C	GPN3	Q06543	272 aa		0.4	□□□□□ -2.34
BEM3	YPL115C	RPL28	P02406	149 aa	Known RBP	0.4	□□□□□ -2.35
BEM3	YPL115C	FAR1	P21268	830 aa		0.4	□□□□□ -2.35
BEM3	YPL115C	YCR016W	P25617	290 aa	Known RBP	0.4	□□□□□ -2.35
BEM3	YPL115C	AST1	P35183	429 aa		0.4	□□□□□ -2.35
BEM3	YPL115C	AGP3	P43548	558 aa		0.4	□□□□□ -2.35

Retrieved 100 of 5,963 RNA–protein pairs in 84.4 ms