RNA–Protein interactions for RNA: YPL047W

SGF11, Transcript of Integral subunit of SAGA histone acetyltransferase complex, yeast

Gene SGF11, Length 300 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SGF11	YPL047W	SEN34	P39707	275 aa		0.49	□□□□□ -2.33
SGF11	YPL047W	AGX1	P43567	385 aa		0.49	□□□□□ -2.33
SGF11	YPL047W	GON7	P46984	123 aa		0.49	□□□□□ -2.33
SGF11	YPL047W	COX16	P47081	118 aa		0.49	□□□□□ -2.33
SGF11	YPL047W	CUE3	P53137	624 aa	Known RBP	0.49	□□□□□ -2.33
SGF11	YPL047W	YNL050C	P53952	270 aa		0.49	□□□□□ -2.33
SGF11	YPL047W	SDC1	Q03323	175 aa		0.49	□□□□□ -2.33
SGF11	YPL047W	CAB5	Q03941	241 aa		0.49	□□□□□ -2.33
SGF11	YPL047W	DPP1	Q05521	289 aa		0.49	□□□□□ -2.33
SGF11	YPL047W	TAZ1	Q06510	381 aa		0.49	□□□□□ -2.33
SGF11	YPL047W	YOR114W	Q12219	294 aa		0.49	□□□□□ -2.33
SGF11	YPL047W	RRP42	Q12277	265 aa	Predicted RBP	0.49	□□□□□ -2.33
SGF11	YPL047W	ATP6	P00854	259 aa		0.48	□□□□□ -2.33
SGF11	YPL047W	PET494	P07390	489 aa	Predicted RBP	0.48	□□□□□ -2.33
SGF11	YPL047W	YOL162W	P0CF19	215 aa		0.48	□□□□□ -2.33
SGF11	YPL047W	RPC37	P36121	282 aa		0.48	□□□□□ -2.33
SGF11	YPL047W	ARN2	P38724	620 aa		0.48	□□□□□ -2.33
SGF11	YPL047W	RCY1	P39531	840 aa		0.48	□□□□□ -2.33
SGF11	YPL047W	YHB1	P39676	399 aa	Known RBP	0.48	□□□□□ -2.33
SGF11	YPL047W	RPL10	P41805	221 aa	Known RBP	0.48	□□□□□ -2.33
SGF11	YPL047W	SNX4	P47057	423 aa		0.48	□□□□□ -2.33
SGF11	YPL047W	TAD2	P47058	250 aa		0.48	□□□□□ -2.33
SGF11	YPL047W	IBA57	P47158	497 aa		0.48	□□□□□ -2.33
SGF11	YPL047W	GTO1	P48239	356 aa		0.48	□□□□□ -2.33
SGF11	YPL047W	NIF3	P53081	288 aa		0.48	□□□□□ -2.33
SGF11	YPL047W	VPS60	Q03390	229 aa		0.48	□□□□□ -2.33
SGF11	YPL047W	RCF1	Q03713	159 aa		0.48	□□□□□ -2.33
SGF11	YPL047W	TAF9	Q05027	157 aa		0.48	□□□□□ -2.33
SGF11	YPL047W	LOA1	Q06508	300 aa		0.48	□□□□□ -2.33
SGF11	YPL047W	YOL019W	Q08157	551 aa		0.48	□□□□□ -2.33
SGF11	YPL047W	SAM4	Q08985	325 aa	Known RBP	0.48	□□□□□ -2.33
SGF11	YPL047W	ERP4	Q12450	207 aa		0.48	□□□□□ -2.33
SGF11	YPL047W	SCL1	P21243	252 aa	Known RBP	0.47	□□□□□ -2.33
SGF11	YPL047W	YGL010W	P25338	174 aa		0.47	□□□□□ -2.33
SGF11	YPL047W	RPL5	P26321	297 aa	Known RBP	0.47	□□□□□ -2.33
SGF11	YPL047W	RPS0A	P32905	252 aa	Known RBP	0.47	□□□□□ -2.33
SGF11	YPL047W	YKL063C	P35725	167 aa		0.47	□□□□□ -2.33
SGF11	YPL047W	UIP5	P36137	443 aa		0.47	□□□□□ -2.33
SGF11	YPL047W	SWC5	P38326	303 aa		0.47	□□□□□ -2.33
SGF11	YPL047W	DSE2	P38844	325 aa		0.47	□□□□□ -2.33
SGF11	YPL047W	CIS3	P47001	227 aa		0.47	□□□□□ -2.33
SGF11	YPL047W	LOH1	P47055	219 aa		0.47	□□□□□ -2.33
SGF11	YPL047W	FMP41	P53889	259 aa	Known RBP	0.47	□□□□□ -2.33
SGF11	YPL047W	AAH1	P53909	347 aa		0.47	□□□□□ -2.33
SGF11	YPL047W	PRM15	Q03262	622 aa		0.47	□□□□□ -2.33
SGF11	YPL047W	PEX10	Q05568	337 aa		0.47	□□□□□ -2.33
SGF11	YPL047W	PBP4	Q07362	185 aa	Known RBP	0.47	□□□□□ -2.33
SGF11	YPL047W	SIA1	Q12212	622 aa		0.47	□□□□□ -2.33
SGF11	YPL047W	PSY3	Q12318	242 aa		0.47	□□□□□ -2.33
SGF11	YPL047W	PAA1	Q12447	191 aa	Known RBP	0.47	□□□□□ -2.33
SGF11	YPL047W	YPR1	Q12458	312 aa		0.47	□□□□□ -2.33
SGF11	YPL047W	SAS5	Q99314	248 aa		0.47	□□□□□ -2.33
SGF11	YPL047W	YAL064W-B	O13512	126 aa		0.46	□□□□□ -2.34
SGF11	YPL047W	RAS2	P01120	322 aa	Known RBP	0.46	□□□□□ -2.34
SGF11	YPL047W	CDC37	P06101	506 aa	Known RBP	0.46	□□□□□ -2.34
SGF11	YPL047W	FBA1	P14540	359 aa	Known RBP	0.46	□□□□□ -2.34
SGF11	YPL047W	PET18	P25362	215 aa		0.46	□□□□□ -2.34
SGF11	YPL047W	CAM1	P29547	415 aa	Known RBP	0.46	□□□□□ -2.34
SGF11	YPL047W	RNP1	P32385	249 aa		0.46	□□□□□ -2.34
SGF11	YPL047W	SPT4	P32914	102 aa	Predicted RBP	0.46	□□□□□ -2.34
SGF11	YPL047W	ECM13	P38195	257 aa		0.46	□□□□□ -2.34
SGF11	YPL047W	YBR220C	P38318	560 aa		0.46	□□□□□ -2.34
SGF11	YPL047W	NAS2	P40555	220 aa		0.46	□□□□□ -2.34
SGF11	YPL047W	OST2	P46964	130 aa		0.46	□□□□□ -2.34
SGF11	YPL047W	MDM34	P53083	459 aa		0.46	□□□□□ -2.34
SGF11	YPL047W	NUP49	Q02199	472 aa		0.46	□□□□□ -2.34
SGF11	YPL047W	TRM44	Q02648	567 aa	Known RBP	0.46	□□□□□ -2.34
SGF11	YPL047W	RSM10	Q03201	203 aa		0.46	□□□□□ -2.34
SGF11	YPL047W	YMR209C	Q03648	457 aa		0.46	□□□□□ -2.34
SGF11	YPL047W	PML1	Q07930	204 aa	Predicted RBP	0.46	□□□□□ -2.34
SGF11	YPL047W	GEP5	Q12393	293 aa		0.46	□□□□□ -2.34
SGF11	YPL047W	DCN1	Q12395	269 aa		0.46	□□□□□ -2.34
SGF11	YPL047W	YMR316C-A	I2HB70	103 aa		0.45	□□□□□ -2.34
SGF11	YPL047W	MDH2	P22133	377 aa		0.45	□□□□□ -2.34
SGF11	YPL047W	PEX3	P28795	441 aa		0.45	□□□□□ -2.34
SGF11	YPL047W	PEX4	P29340	183 aa		0.45	□□□□□ -2.34
SGF11	YPL047W	SWD2	P36104	329 aa	Predicted RBP	0.45	□□□□□ -2.34
SGF11	YPL047W	FET3	P38993	636 aa		0.45	□□□□□ -2.34
SGF11	YPL047W	NPT1	P39683	429 aa	Known RBP	0.45	□□□□□ -2.34
SGF11	YPL047W	VPS20	Q04272	221 aa		0.45	□□□□□ -2.34
SGF11	YPL047W	MGR3	Q04472	501 aa		0.45	□□□□□ -2.34
SGF11	YPL047W	MEU1	Q07938	337 aa	Known RBP RIP-Chip data	0.45	□□□□□ -2.34	not detected
SGF11	YPL047W	NFI1	Q12216	726 aa		0.45	□□□□□ -2.34
SGF11	YPL047W	RPS3	P05750	240 aa	Known RBP	0.44	□□□□□ -2.34
SGF11	YPL047W	DSF1	P0CX08	502 aa		0.44	□□□□□ -2.34
SGF11	YPL047W	YNR073C	P0CX09	502 aa		0.44	□□□□□ -2.34
SGF11	YPL047W	VMA2	P16140	517 aa	Known RBP	0.44	□□□□□ -2.34
SGF11	YPL047W	YKR045C	P36138	183 aa		0.44	□□□□□ -2.34
SGF11	YPL047W	VPS45	P38932	577 aa		0.44	□□□□□ -2.34
SGF11	YPL047W	AVT2	P39981	480 aa		0.44	□□□□□ -2.34
SGF11	YPL047W	GLE2	P40066	365 aa		0.44	□□□□□ -2.34
SGF11	YPL047W	AIM20	P40451	204 aa		0.44	□□□□□ -2.34
SGF11	YPL047W	SMD3	P43321	101 aa	Known RBP	0.44	□□□□□ -2.34
SGF11	YPL047W	LOC1	P43586	204 aa	Predicted RBP	0.44	□□□□□ -2.34
SGF11	YPL047W	YJL028W	P47062	111 aa		0.44	□□□□□ -2.34
SGF11	YPL047W	NUP57	P48837	541 aa		0.44	□□□□□ -2.34
SGF11	YPL047W	DBP6	P53734	629 aa	Known RBP	0.44	□□□□□ -2.34
SGF11	YPL047W	ATC1	Q04005	294 aa		0.44	□□□□□ -2.34
SGF11	YPL047W	SEC10	Q06245	871 aa		0.44	□□□□□ -2.34
SGF11	YPL047W	GPN3	Q06543	272 aa		0.44	□□□□□ -2.34

Retrieved 100 of 5,963 RNA–protein pairs in 19.4 ms