RNA–Protein interactions for RNA: YOR275C

RIM20, Transcript of Protein involved in proteolytic activation of Rim101p, yeast

Gene RIM20, Length 1,986 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RIM20	YOR275C	MBA1	P38300	278 aa		0.86	□□□□□ -2.27
RIM20	YOR275C	YHR045W	P38775	560 aa		0.86	□□□□□ -2.27
RIM20	YOR275C	BIG1	P38813	335 aa		0.86	□□□□□ -2.27
RIM20	YOR275C	NPT1	P39683	429 aa	Known RBP	0.86	□□□□□ -2.27
RIM20	YOR275C	SMB1	P40018	196 aa	Known RBP	0.86	□□□□□ -2.27
RIM20	YOR275C	IBA57	P47158	497 aa		0.86	□□□□□ -2.27
RIM20	YOR275C	MIG2	P53035	382 aa		0.86	□□□□□ -2.27
RIM20	YOR275C	YGL034C	P53186	121 aa		0.86	□□□□□ -2.27
RIM20	YOR275C	SRL4	Q03085	281 aa		0.86	□□□□□ -2.27
RIM20	YOR275C	RVB1	Q03940	463 aa	Known RBP	0.86	□□□□□ -2.27
RIM20	YOR275C	SEC13	Q04491	297 aa	Known RBP	0.86	□□□□□ -2.27
RIM20	YOR275C	YPL278C	Q08990	100 aa		0.86	□□□□□ -2.27
RIM20	YOR275C	YPL245W	Q12179	454 aa	Known RBP	0.86	□□□□□ -2.27
RIM20	YOR275C	YOL107W	Q12239	342 aa		0.86	□□□□□ -2.27
RIM20	YOR275C	TIM22	Q12328	207 aa		0.86	□□□□□ -2.27
RIM20	YOR275C	CFT1	Q06632	1357 aa	Known RBP	0.86	□□□□□ -2.27
RIM20	YOR275C	PET494	P07390	489 aa	Predicted RBP	0.85	□□□□□ -2.27
RIM20	YOR275C	YOL163W	P0CF20	169 aa		0.85	□□□□□ -2.27
RIM20	YOR275C	RSR1	P13856	272 aa		0.85	□□□□□ -2.27
RIM20	YOR275C	APA2	P22108	325 aa		0.85	□□□□□ -2.27
RIM20	YOR275C	RRT12	P25381	491 aa		0.85	□□□□□ -2.27
RIM20	YOR275C	CSE1	P33307	960 aa		0.85	□□□□□ -2.27
RIM20	YOR275C	HIS2	P38635	335 aa		0.85	□□□□□ -2.27
RIM20	YOR275C	PEX18	P38855	283 aa		0.85	□□□□□ -2.27
RIM20	YOR275C	YIL012W	P40551	113 aa		0.85	□□□□□ -2.27
RIM20	YOR275C	LOH1	P47055	219 aa		0.85	□□□□□ -2.27
RIM20	YOR275C	YMR209C	Q03648	457 aa		0.85	□□□□□ -2.27
RIM20	YOR275C	YLR173W	Q06247	608 aa		0.85	□□□□□ -2.27
RIM20	YOR275C	SDO1	Q07953	250 aa	Known RBP	0.85	□□□□□ -2.27
RIM20	YOR275C	GIS3	Q12418	502 aa		0.85	□□□□□ -2.27
RIM20	YOR275C	CHD1	P32657	1468 aa		0.85	□□□□□ -2.27
RIM20	YOR275C	CSM1	P25651	190 aa		0.85	□□□□□ -2.27
RIM20	YOR275C	PRS4	P38063	326 aa	Predicted RBP	0.85	□□□□□ -2.27
RIM20	YOR275C	URA8	P38627	578 aa	Predicted RBP	0.85	□□□□□ -2.27
RIM20	YOR275C	MRX5	P47007	382 aa		0.85	□□□□□ -2.27
RIM20	YOR275C	HOC1	P47124	396 aa		0.85	□□□□□ -2.27
RIM20	YOR275C	DSK2	P48510	373 aa		0.85	□□□□□ -2.27
RIM20	YOR275C	TRM44	Q02648	567 aa	Known RBP	0.85	□□□□□ -2.27
RIM20	YOR275C	SDC1	Q03323	175 aa		0.85	□□□□□ -2.27
RIM20	YOR275C	OST6	Q03723	332 aa		0.85	□□□□□ -2.27
RIM20	YOR275C	SNX41	Q04053	625 aa		0.85	□□□□□ -2.27
RIM20	YOR275C	MYO5	Q04439	1219 aa	Known RBP	0.85	□□□□□ -2.27
RIM20	YOR275C	PLB3	Q08108	686 aa		0.85	□□□□□ -2.27
RIM20	YOR275C	MSH5	Q12175	901 aa		0.85	□□□□□ -2.27
RIM20	YOR275C	SIA1	Q12212	622 aa		0.85	□□□□□ -2.27
RIM20	YOR275C	YPR1	Q12458	312 aa		0.85	□□□□□ -2.27
RIM20	YOR275C	YCL012C	Q8J0M4	134 aa		0.85	□□□□□ -2.27
RIM20	YOR275C	RGS2	Q99188	309 aa		0.85	□□□□□ -2.27
RIM20	YOR275C	DNF1	P32660	1571 aa		0.84	□□□□□ -2.27
RIM20	YOR275C	RAD7	P06779	565 aa		0.84	□□□□□ -2.28
RIM20	YOR275C	RHO1	P06780	209 aa	Known RBP	0.84	□□□□□ -2.28
RIM20	YOR275C	TFS1	P14306	219 aa		0.84	□□□□□ -2.28
RIM20	YOR275C	SAR1	P20606	190 aa	Known RBP	0.84	□□□□□ -2.28
RIM20	YOR275C	VMA5	P31412	392 aa	Known RBP	0.84	□□□□□ -2.28
RIM20	YOR275C	SPT4	P32914	102 aa	Predicted RBP	0.84	□□□□□ -2.28
RIM20	YOR275C	YHR035W	P38769	630 aa		0.84	□□□□□ -2.28
RIM20	YOR275C	YER085C	P40058	173 aa		0.84	□□□□□ -2.28
RIM20	YOR275C	RTR1	P40084	226 aa	Predicted RBP	0.84	□□□□□ -2.28
RIM20	YOR275C	MSS2	P40990	351 aa		0.84	□□□□□ -2.28
RIM20	YOR275C	SYS1	P41544	203 aa		0.84	□□□□□ -2.28
RIM20	YOR275C	DAN1	P47178	298 aa		0.84	□□□□□ -2.28
RIM20	YOR275C	TOS8	P53147	276 aa		0.84	□□□□□ -2.28
RIM20	YOR275C	MPP6	P53725	186 aa	Predicted RBP	0.84	□□□□□ -2.28
RIM20	YOR275C	NOP13	P53883	403 aa	Known RBP RIP-Chip data	0.84	□□□□□ -2.28	not detected
RIM20	YOR275C	FMP41	P53889	259 aa	Known RBP	0.84	□□□□□ -2.28
RIM20	YOR275C	IRC4	Q03036	179 aa		0.84	□□□□□ -2.28
RIM20	YOR275C	YLR446W	Q06204	433 aa		0.84	□□□□□ -2.28
RIM20	YOR275C	BCP1	Q06338	283 aa		0.84	□□□□□ -2.28
RIM20	YOR275C	ASR1	Q06834	288 aa		0.84	□□□□□ -2.28
RIM20	YOR275C	DTD1	Q07648	150 aa	Known RBP	0.84	□□□□□ -2.28
RIM20	YOR275C	PRR2	Q12310	699 aa		0.84	□□□□□ -2.28
RIM20	YOR275C	RPS3	P05750	240 aa	Known RBP	0.83	□□□□□ -2.28
RIM20	YOR275C	HIS3	P06633	220 aa		0.83	□□□□□ -2.28
RIM20	YOR275C	ACB1	P31787	87 aa		0.83	□□□□□ -2.28
RIM20	YOR275C	DOA4	P32571	926 aa		0.83	□□□□□ -2.28
RIM20	YOR275C	ZRT1	P32804	376 aa		0.83	□□□□□ -2.28
RIM20	YOR275C	TAF14	P35189	244 aa		0.83	□□□□□ -2.28
RIM20	YOR275C	EBP2	P36049	427 aa	Known RBP	0.83	□□□□□ -2.28
RIM20	YOR275C	CAB3	P36076	571 aa		0.83	□□□□□ -2.28
RIM20	YOR275C	YKL075C	P36083	450 aa		0.83	□□□□□ -2.28
RIM20	YOR275C	AIM29	P36154	155 aa		0.83	□□□□□ -2.28
RIM20	YOR275C	MRX3	P38172	270 aa		0.83	□□□□□ -2.28
RIM20	YOR275C	LDB7	P38210	180 aa		0.83	□□□□□ -2.28
RIM20	YOR275C	PET100	P38958	111 aa		0.83	□□□□□ -2.28
RIM20	YOR275C	OTU1	P43558	301 aa		0.83	□□□□□ -2.28
RIM20	YOR275C	YJR146W	P47174	117 aa		0.83	□□□□□ -2.28
RIM20	YOR275C	BAT2	P47176	376 aa	Known RBP	0.83	□□□□□ -2.28
RIM20	YOR275C	MAL13	P53338	473 aa		0.83	□□□□□ -2.28
RIM20	YOR275C	ALG9	P53868	555 aa	Known RBP	0.83	□□□□□ -2.28
RIM20	YOR275C	ARC18	Q05933	178 aa	Known RBP	0.83	□□□□□ -2.28
RIM20	YOR275C	SAM4	Q08985	325 aa	Known RBP	0.83	□□□□□ -2.28
RIM20	YOR275C	ADF1	Q2V2Q1	113 aa		0.83	□□□□□ -2.28
RIM20	YOR275C	VPS1	P21576	704 aa	Known RBP	0.83	□□□□□ -2.28
RIM20	YOR275C	YSR3	P23501	404 aa		0.83	□□□□□ -2.28
RIM20	YOR275C	RBK1	P25332	333 aa		0.83	□□□□□ -2.28
RIM20	YOR275C	YCR102C	P25608	368 aa		0.83	□□□□□ -2.28
RIM20	YOR275C	QRI5	P32344	111 aa		0.83	□□□□□ -2.28
RIM20	YOR275C	AEP1	P32493	518 aa		0.83	□□□□□ -2.28
RIM20	YOR275C	YKT6	P36015	200 aa	Known RBP	0.83	□□□□□ -2.28
RIM20	YOR275C	SWD2	P36104	329 aa	Predicted RBP	0.83	□□□□□ -2.28

Retrieved 100 of 5,963 RNA–protein pairs in 24.7 ms