RNA–Protein interactions for RNA: YOR069W

VPS5, Transcript of Nexin-1 homolog, yeastyeast

Gene VPS5, Length 2,028 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS5YOR069W SPC19Q03954 165 aa5.43□□□□□ -1.54
VPS5YOR069W RTN1Q04947 295 aaKnown RBP5.43□□□□□ -1.54
VPS5YOR069W RRT7Q07829 113 aa5.43□□□□□ -1.54
VPS5YOR069W YDL177CQ12257 170 aa5.43□□□□□ -1.54
VPS5YOR069W AHC1Q12433 566 aa5.43□□□□□ -1.54
VPS5YOR069W ERG27Q12452 347 aaKnown RBP5.43□□□□□ -1.54
VPS5YOR069W PNO1Q99216 274 aaKnown RBP5.43□□□□□ -1.54
VPS5YOR069W PBN1P25580 416 aa5.43□□□□□ -1.54
VPS5YOR069W CDC50P25656 391 aa5.43□□□□□ -1.54
VPS5YOR069W YPC1P38298 316 aa5.43□□□□□ -1.54
VPS5YOR069W YPT35P38815 214 aaKnown RBP5.43□□□□□ -1.54
VPS5YOR069W TRR2P38816 342 aa5.43□□□□□ -1.54
VPS5YOR069W GGC1P38988 300 aa5.43□□□□□ -1.54
VPS5YOR069W FAA3P39002 694 aa5.43□□□□□ -1.54
VPS5YOR069W YIL108WP40483 696 aaKnown RBP5.43□□□□□ -1.54
VPS5YOR069W HXT14P42833 540 aa5.43□□□□□ -1.54
VPS5YOR069W ADO1P47143 340 aaKnown RBP5.43□□□□□ -1.54
VPS5YOR069W SAM37P50110 327 aa5.43□□□□□ -1.54
VPS5YOR069W AVT4P50944 713 aa5.43□□□□□ -1.54
VPS5YOR069W RNH70P53331 553 aa5.43□□□□□ -1.54
VPS5YOR069W CCE1Q03702 353 aa5.43□□□□□ -1.54
VPS5YOR069W CUE4Q04201 117 aaPredicted RBP5.43□□□□□ -1.54
VPS5YOR069W YMR310CQ04867 317 aaPredicted RBP5.43□□□□□ -1.54
VPS5YOR069W TMA10Q06177 86 aa5.43□□□□□ -1.54
VPS5YOR069W PAA1Q12447 191 aaKnown RBP5.43□□□□□ -1.54
VPS5YOR069W STE7P06784 515 aa5.42□□□□□ -1.54
VPS5YOR069W FUN14P18411 198 aa5.42□□□□□ -1.54
VPS5YOR069W PPH21P23594 369 aa5.42□□□□□ -1.54
VPS5YOR069W RIB5P38145 238 aa5.42□□□□□ -1.54
VPS5YOR069W MAL32P38158 584 aa5.42□□□□□ -1.54
VPS5YOR069W SHG1P38337 142 aa5.42□□□□□ -1.54
VPS5YOR069W GPI16P38875 610 aa5.42□□□□□ -1.54
VPS5YOR069W SMB1P40018 196 aaKnown RBP5.42□□□□□ -1.54
VPS5YOR069W CIN2P46670 268 aa5.42□□□□□ -1.54
VPS5YOR069W SFH5P47008 294 aa5.42□□□□□ -1.54
VPS5YOR069W ART5P53244 586 aaKnown RBP5.42□□□□□ -1.54
VPS5YOR069W MAL12P53341 584 aa5.42□□□□□ -1.54
VPS5YOR069W YIF1P53845 314 aaKnown RBP5.42□□□□□ -1.54
VPS5YOR069W PAL1Q05518 499 aaKnown RBP5.42□□□□□ -1.54
VPS5YOR069W TAZ1Q06510 381 aa5.42□□□□□ -1.54
VPS5YOR069W HDA2Q06629 674 aa5.42□□□□□ -1.54
VPS5YOR069W MRX9Q07349 420 aaKnown RBP5.42□□□□□ -1.54
VPS5YOR069W REX4Q08237 289 aa5.42□□□□□ -1.54
VPS5YOR069W YPR064WQ12492 139 aa5.42□□□□□ -1.54
VPS5YOR069W YLR146W-AQ2V2P1 62 aa5.42□□□□□ -1.54
VPS5YOR069W ODC2Q99297 307 aa5.42□□□□□ -1.54
VPS5YOR069W POT1P27796 417 aaKnown RBP RIP-Chip data5.41□□□□□ -1.54not detected
VPS5YOR069W PPZ2P33329 710 aa5.41□□□□□ -1.54
VPS5YOR069W KKQ8P36004 724 aa5.41□□□□□ -1.54
VPS5YOR069W MRPL27P36526 146 aaPredicted RBP5.41□□□□□ -1.54
VPS5YOR069W IML3P38265 245 aa5.41□□□□□ -1.54
VPS5YOR069W YPT31P38555 223 aaKnown RBP5.41□□□□□ -1.54
VPS5YOR069W PRP39P39682 629 aaKnown RBP5.41□□□□□ -1.54
VPS5YOR069W FLX1P40464 311 aa5.41□□□□□ -1.54
VPS5YOR069W PAU15P40585 124 aa5.41□□□□□ -1.54
VPS5YOR069W RAD17P48581 401 aa5.41□□□□□ -1.54
VPS5YOR069W UBP8P50102 471 aa5.41□□□□□ -1.54
VPS5YOR069W EMC4P53073 190 aa5.41□□□□□ -1.54
VPS5YOR069W YGL204CP53089 101 aa5.41□□□□□ -1.54
VPS5YOR069W CDH1P53197 566 aa5.41□□□□□ -1.54
VPS5YOR069W NAT4Q04751 285 aa5.41□□□□□ -1.54
VPS5YOR069W SET6Q12529 373 aa5.41□□□□□ -1.54
VPS5YOR069W YLR422WQ06409 1932 aa5.41□□□□□ -1.54
VPS5YOR069W CDC28P00546 298 aaKnown RBP5.41□□□□□ -1.54
VPS5YOR069W TY1A-HP0C2I4 478 aaKnown RBP5.41□□□□□ -1.54
VPS5YOR069W MCK1P21965 375 aaKnown RBP5.41□□□□□ -1.54
VPS5YOR069W PTP1P25044 335 aa5.41□□□□□ -1.54
VPS5YOR069W ECM15P35195 104 aa5.41□□□□□ -1.54
VPS5YOR069W EHT1P38295 451 aa5.41□□□□□ -1.54
VPS5YOR069W ECM34P38728 170 aa5.41□□□□□ -1.54
VPS5YOR069W SYS1P41544 203 aa5.41□□□□□ -1.54
VPS5YOR069W NIT3P49954 291 aa5.41□□□□□ -1.54
VPS5YOR069W PRM1P53835 661 aa5.41□□□□□ -1.54
VPS5YOR069W APM1Q00776 475 aaPredicted RBP5.41□□□□□ -1.54
VPS5YOR069W YDR415CQ04033 374 aaPredicted RBP5.41□□□□□ -1.54
VPS5YOR069W AIM6Q07716 390 aa5.41□□□□□ -1.54
VPS5YOR069W COX19Q3E731 98 aa5.41□□□□□ -1.54
VPS5YOR069W RPS21BQ3E754 87 aaKnown RBP5.41□□□□□ -1.54
VPS5YOR069W HVG1P0CE11 249 aa5.4□□□□□ -1.54
VPS5YOR069W SCL1P21243 252 aaKnown RBP5.4□□□□□ -1.54
VPS5YOR069W NFS1P25374 497 aa5.4□□□□□ -1.54
VPS5YOR069W ADH7P25377 361 aa5.4□□□□□ -1.54
VPS5YOR069W YCR101CP25607 182 aa5.4□□□□□ -1.54
VPS5YOR069W MGM101P32787 269 aaKnown RBP5.4□□□□□ -1.54
VPS5YOR069W GMH1P36125 273 aa5.4□□□□□ -1.54
VPS5YOR069W SDS24P38314 527 aa5.4□□□□□ -1.54
VPS5YOR069W SAF1P38352 637 aa5.4□□□□□ -1.54
VPS5YOR069W YER158CP40095 573 aa5.4□□□□□ -1.54
VPS5YOR069W YNL195CP40168 261 aa5.4□□□□□ -1.54
VPS5YOR069W BTT1P40314 149 aaPredicted RBP5.4□□□□□ -1.54
VPS5YOR069W YFR020WP43600 232 aa5.4□□□□□ -1.54
VPS5YOR069W NIF3P53081 288 aa5.4□□□□□ -1.54
VPS5YOR069W MPA43P53583 542 aaPredicted RBP5.4□□□□□ -1.54
VPS5YOR069W YNR021WP53723 404 aaKnown RBP5.4□□□□□ -1.54
VPS5YOR069W CTF19Q02732 369 aa5.4□□□□□ -1.54
VPS5YOR069W RSM10Q03201 203 aa5.4□□□□□ -1.54
VPS5YOR069W YML083CQ04526 418 aa5.4□□□□□ -1.54
VPS5YOR069W RTK1Q12100 620 aaPredicted RBP5.4□□□□□ -1.54
VPS5YOR069W GAL4P04386 881 aa5.4□□□□□ -1.55
VPS5YOR069W FUR4P05316 633 aaKnown RBP5.4□□□□□ -1.55
Retrieved 100 of 5,963 RNA–protein pairs in 27.4 ms