RNA–Protein interactions for RNA: YNL335W

DDI3, Transcript of Protein of unknown function, yeast

Gene DDI3, Length 678 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
DDI3	YNL335W	FRT2	P39734	528 aa		3.18	□□□□□ -1.9
DDI3	YNL335W	RRG9	P40156	214 aa		3.18	□□□□□ -1.9
DDI3	YNL335W	YIL054W	P40524	105 aa		3.18	□□□□□ -1.9
DDI3	YNL335W	SWC4	P53201	476 aa		3.18	□□□□□ -1.9
DDI3	YNL335W	YNR066C	P53752	436 aa		3.18	□□□□□ -1.9
DDI3	YNL335W	SPO19	Q03029	223 aa		3.18	□□□□□ -1.9
DDI3	YNL335W	VIK1	Q12045	647 aa		3.18	□□□□□ -1.9
DDI3	YNL335W	JIP3	O13555	125 aa		3.17	□□□□□ -1.9
DDI3	YNL335W	FUS3	P16892	353 aa	Known RBP	3.17	□□□□□ -1.9
DDI3	YNL335W	ZRT3	P34240	503 aa		3.17	□□□□□ -1.9
DDI3	YNL335W	KEL2	P50090	882 aa		3.17	□□□□□ -1.9
DDI3	YNL335W	PNC1	P53184	216 aa	Known RBP	3.17	□□□□□ -1.9
DDI3	YNL335W	BIO4	P53630	237 aa		3.17	□□□□□ -1.9
DDI3	YNL335W	RNY1	Q02933	434 aa	Known RBP	3.17	□□□□□ -1.9
DDI3	YNL335W	VTI1	Q04338	217 aa		3.17	□□□□□ -1.9
DDI3	YNL335W	MYO5	Q04439	1219 aa	Known RBP	3.17	□□□□□ -1.9
DDI3	YNL335W	YMR114C	Q04471	368 aa	Known RBP	3.17	□□□□□ -1.9
DDI3	YNL335W	SMD2	Q06217	110 aa	Known RBP	3.17	□□□□□ -1.9
DDI3	YNL335W	TFC7	Q12415	435 aa		3.17	□□□□□ -1.9
DDI3	YNL335W	LAG2	Q92325	660 aa		3.17	□□□□□ -1.9
DDI3	YNL335W	RIF1	P29539	1916 aa		3.17	□□□□□ -1.9
DDI3	YNL335W	TDH3	P00359	332 aa	Known RBP RIP-Chip data	3.16	□□□□□ -1.9	not detected
DDI3	YNL335W	DBP3	P20447	523 aa	Known RBP	3.16	□□□□□ -1.9
DDI3	YNL335W	IFM1	P25038	676 aa		3.16	□□□□□ -1.9
DDI3	YNL335W	SKG6	P32900	734 aa	Predicted RBP	3.16	□□□□□ -1.9
DDI3	YNL335W	BDH1	P39714	382 aa		3.16	□□□□□ -1.9
DDI3	YNL335W	RIO2	P40160	425 aa	Known RBP	3.16	□□□□□ -1.9
DDI3	YNL335W	SLM1	P40485	686 aa		3.16	□□□□□ -1.9
DDI3	YNL335W	EGD1	Q02642	157 aa	Known RBP	3.16	□□□□□ -1.9
DDI3	YNL335W	GMC1	Q04399	608 aa		3.16	□□□□□ -1.9
DDI3	YNL335W	YLR413W	Q06689	675 aa		3.16	□□□□□ -1.9
DDI3	YNL335W	DAS2	Q12084	232 aa		3.16	□□□□□ -1.9
DDI3	YNL335W	RIO1	Q12196	484 aa	Known RBP	3.16	□□□□□ -1.9
DDI3	YNL335W	RRP42	Q12277	265 aa	Predicted RBP	3.16	□□□□□ -1.9
DDI3	YNL335W	TRM10	Q12400	293 aa		3.16	□□□□□ -1.9
DDI3	YNL335W	DFM1	Q12743	341 aa	Known RBP	3.16	□□□□□ -1.9
DDI3	YNL335W	GAL7	P08431	366 aa		3.15	□□□□□ -1.91
DDI3	YNL335W	RPL31A	P0C2H8	113 aa	Known RBP	3.15	□□□□□ -1.91
DDI3	YNL335W	COX10	P21592	462 aa		3.15	□□□□□ -1.91
DDI3	YNL335W	GPI12	P23797	304 aa		3.15	□□□□□ -1.91
DDI3	YNL335W	CDC10	P25342	322 aa	Known RBP	3.15	□□□□□ -1.91
DDI3	YNL335W	GCG1	P32656	232 aa	Known RBP	3.15	□□□□□ -1.91
DDI3	YNL335W	UBC6	P33296	250 aa	Predicted RBP	3.15	□□□□□ -1.91
DDI3	YNL335W	FRM2	P37261	193 aa		3.15	□□□□□ -1.91
DDI3	YNL335W	YPC1	P38298	316 aa		3.15	□□□□□ -1.91
DDI3	YNL335W	TRR2	P38816	342 aa		3.15	□□□□□ -1.91
DDI3	YNL335W	SPL2	P38839	148 aa		3.15	□□□□□ -1.91
DDI3	YNL335W	RPC17	P47076	161 aa		3.15	□□□□□ -1.91
DDI3	YNL335W	UBC13	P52490	153 aa		3.15	□□□□□ -1.91
DDI3	YNL335W	YGL118C	P53132	145 aa		3.15	□□□□□ -1.91
DDI3	YNL335W	ECM18	Q04623	453 aa		3.15	□□□□□ -1.91
DDI3	YNL335W	ERV41	Q04651	352 aa		3.15	□□□□□ -1.91
DDI3	YNL335W	ECM19	Q06011	112 aa		3.15	□□□□□ -1.91
DDI3	YNL335W	YLR446W	Q06204	433 aa		3.15	□□□□□ -1.91
DDI3	YNL335W	DIB1	Q06819	143 aa	Predicted RBP	3.15	□□□□□ -1.91
DDI3	YNL335W	YDL211C	Q12121	372 aa		3.15	□□□□□ -1.91
DDI3	YNL335W	ERP3	Q12403	225 aa		3.15	□□□□□ -1.91
DDI3	YNL335W	TUS1	Q06412	1307 aa		3.15	□□□□□ -1.91
DDI3	YNL335W	CSM1	P25651	190 aa		3.14	□□□□□ -1.91
DDI3	YNL335W	TDA11	P38854	504 aa		3.14	□□□□□ -1.91
DDI3	YNL335W	YIR035C	P40579	254 aa		3.14	□□□□□ -1.91
DDI3	YNL335W	YFH7	P43591	353 aa		3.14	□□□□□ -1.91
DDI3	YNL335W	GCD14	P46959	383 aa	Predicted RBP	3.14	□□□□□ -1.91
DDI3	YNL335W	ILM1	P47155	203 aa		3.14	□□□□□ -1.91
DDI3	YNL335W	KAP114	P53067	1004 aa		3.14	□□□□□ -1.91
DDI3	YNL335W	HST4	P53688	370 aa		3.14	□□□□□ -1.91
DDI3	YNL335W	YNL260C	P53846	198 aa		3.14	□□□□□ -1.91
DDI3	YNL335W	ERV25	P54837	211 aa	Known RBP	3.14	□□□□□ -1.91
DDI3	YNL335W	YPL077C	Q02831	240 aa		3.14	□□□□□ -1.91
DDI3	YNL335W	SEC13	Q04491	297 aa	Known RBP	3.14	□□□□□ -1.91
DDI3	YNL335W	BCP1	Q06338	283 aa		3.14	□□□□□ -1.91
DDI3	YNL335W	YOR292C	Q08743	309 aa		3.14	□□□□□ -1.91
DDI3	YNL335W	MRPL23	Q12487	163 aa	Predicted RBP	3.14	□□□□□ -1.91
DDI3	YNL335W	TPS2	P31688	896 aa	Known RBP	3.13	□□□□□ -1.91
DDI3	YNL335W	MRPL6	P32904	214 aa		3.13	□□□□□ -1.91
DDI3	YNL335W	YKL063C	P35725	167 aa		3.13	□□□□□ -1.91
DDI3	YNL335W	VPS45	P38932	577 aa		3.13	□□□□□ -1.91
DDI3	YNL335W	CAX4	P53223	239 aa		3.13	□□□□□ -1.91
DDI3	YNL335W	YPR064W	Q12492	139 aa		3.13	□□□□□ -1.91
DDI3	YNL335W	MOT1	P32333	1867 aa		3.12	□□□□□ -1.91
DDI3	YNL335W	RAD3	P06839	778 aa		3.12	□□□□□ -1.91
DDI3	YNL335W	HPR1	P17629	752 aa	Known RBP	3.12	□□□□□ -1.91
DDI3	YNL335W	CPT1	P17898	393 aa		3.12	□□□□□ -1.91
DDI3	YNL335W	FMT1	P32785	401 aa		3.12	□□□□□ -1.91
DDI3	YNL335W	IMP3	P32899	183 aa	Predicted RBP	3.12	□□□□□ -1.91
DDI3	YNL335W	TPO5	P36029	618 aa		3.12	□□□□□ -1.91
DDI3	YNL335W	HIS2	P38635	335 aa		3.12	□□□□□ -1.91
DDI3	YNL335W	GAA1	P39012	614 aa		3.12	□□□□□ -1.91
DDI3	YNL335W	YIA6	P40556	373 aa		3.12	□□□□□ -1.91
DDI3	YNL335W	GDS1	P41913	522 aa		3.12	□□□□□ -1.91
DDI3	YNL335W	AGP3	P43548	558 aa		3.12	□□□□□ -1.91
DDI3	YNL335W	TMA22	P47089	198 aa	Predicted RBP	3.12	□□□□□ -1.91
DDI3	YNL335W	GTO1	P48239	356 aa		3.12	□□□□□ -1.91
DDI3	YNL335W	SMD1	Q02260	146 aa	Predicted RBP	3.12	□□□□□ -1.91
DDI3	YNL335W	GPN3	Q06543	272 aa		3.12	□□□□□ -1.91
DDI3	YNL335W	BER1	Q06688	274 aa	Known RBP	3.12	□□□□□ -1.91
DDI3	YNL335W	ASR1	Q06834	288 aa		3.12	□□□□□ -1.91
DDI3	YNL335W	SEY1	Q99287	776 aa		3.12	□□□□□ -1.91
DDI3	YNL335W	ATP6	P00854	259 aa		3.11	□□□□□ -1.91
DDI3	YNL335W	ILV1	P00927	576 aa	Known RBP	3.11	□□□□□ -1.91

Retrieved 100 of 5,963 RNA–protein pairs in 32.9 ms