RNA–Protein interactions for RNA: YNL245C

CWC25, Transcript of Splicing factor required for the first step of pre-mRNA splicing, yeast

Gene CWC25, Length 540 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CWC25	YNL245C	ERV41	Q04651	352 aa		4.27	□□□□□ -1.73
CWC25	YNL245C	NUM1	Q00402	2748 aa		4.27	□□□□□ -1.73
CWC25	YNL245C	IRA2	P19158	3079 aa		4.26	□□□□□ -1.73
CWC25	YNL245C	ILV1	P00927	576 aa	Known RBP	4.26	□□□□□ -1.73
CWC25	YNL245C	YKL187C	P34231	750 aa		4.26	□□□□□ -1.73
CWC25	YNL245C	INP2	Q03824	705 aa		4.26	□□□□□ -1.73
CWC25	YNL245C	YMR244W	Q04018	355 aa		4.26	□□□□□ -1.73
CWC25	YNL245C	FUS2	Q05670	677 aa		4.26	□□□□□ -1.73
CWC25	YNL245C	IZH4	Q99393	312 aa		4.26	□□□□□ -1.73
CWC25	YNL245C	BI3	Q9ZZW7	517 aa		4.26	□□□□□ -1.73
CWC25	YNL245C	CSM1	P25651	190 aa		4.25	□□□□□ -1.73
CWC25	YNL245C	RPL16B	P26785	198 aa	Known RBP	4.25	□□□□□ -1.73
CWC25	YNL245C	TOR1	P35169	2470 aa		4.25	□□□□□ -1.73
CWC25	YNL245C	MCH2	P36032	473 aa		4.25	□□□□□ -1.73
CWC25	YNL245C	RFT1	P38206	574 aa	Predicted RBP	4.25	□□□□□ -1.73
CWC25	YNL245C	YPC1	P38298	316 aa		4.25	□□□□□ -1.73
CWC25	YNL245C	MEP1	P40260	492 aa		4.25	□□□□□ -1.73
CWC25	YNL245C	FLC3	P53121	802 aa		4.25	□□□□□ -1.73
CWC25	YNL245C	FMP48	P53233	369 aa		4.25	□□□□□ -1.73
CWC25	YNL245C	YNL134C	P53912	376 aa	Known RBP	4.25	□□□□□ -1.73
CWC25	YNL245C	UTP15	Q04305	513 aa	Known RBP	4.25	□□□□□ -1.73
CWC25	YNL245C	SMD2	Q06217	110 aa	Known RBP	4.25	□□□□□ -1.73
CWC25	YNL245C	YPL245W	Q12179	454 aa	Known RBP	4.25	□□□□□ -1.73
CWC25	YNL245C	YBL111C	Q3E7Y5	667 aa		4.25	□□□□□ -1.73
CWC25	YNL245C	RPL31A	P0C2H8	113 aa	Known RBP	4.24	□□□□□ -1.73
CWC25	YNL245C	TCP1	P12612	559 aa	Known RBP	4.24	□□□□□ -1.73
CWC25	YNL245C	VPS1	P21576	704 aa	Known RBP	4.24	□□□□□ -1.73
CWC25	YNL245C	MEK1	P24719	497 aa	Predicted RBP	4.24	□□□□□ -1.73
CWC25	YNL245C	PPQ1	P32945	549 aa		4.24	□□□□□ -1.73
CWC25	YNL245C	SLM1	P40485	686 aa		4.24	□□□□□ -1.73
CWC25	YNL245C	COQ5	P49017	307 aa		4.24	□□□□□ -1.73
CWC25	YNL245C	SWC4	P53201	476 aa		4.24	□□□□□ -1.73
CWC25	YNL245C	YNR066C	P53752	436 aa		4.24	□□□□□ -1.73
CWC25	YNL245C	YNL260C	P53846	198 aa		4.24	□□□□□ -1.73
CWC25	YNL245C	YLR422W	Q06409	1932 aa		4.24	□□□□□ -1.73
CWC25	YNL245C	YGR067C	P53243	804 aa		4.23	□□□□□ -1.73
CWC25	YNL245C	CCH1	P50077	2039 aa		4.22	□□□□□ -1.73
CWC25	YNL245C	TDH3	P00359	332 aa	Known RBP RIP-Chip data	4.22	□□□□□ -1.73	not detected
CWC25	YNL245C	YKL070W	P36087	169 aa		4.22	□□□□□ -1.73
CWC25	YNL245C	MRX3	P38172	270 aa		4.22	□□□□□ -1.73
CWC25	YNL245C	RTT105	P40063	208 aa		4.22	□□□□□ -1.73
CWC25	YNL245C	RRG9	P40156	214 aa		4.22	□□□□□ -1.73
CWC25	YNL245C	GDS1	P41913	522 aa		4.22	□□□□□ -1.73
CWC25	YNL245C	GTO1	P48239	356 aa		4.22	□□□□□ -1.73
CWC25	YNL245C	KEL2	P50090	882 aa		4.22	□□□□□ -1.73
CWC25	YNL245C	UBC13	P52490	153 aa		4.22	□□□□□ -1.73
CWC25	YNL245C	YLR446W	Q06204	433 aa		4.22	□□□□□ -1.73
CWC25	YNL245C	IES4	Q08561	116 aa		4.22	□□□□□ -1.73
CWC25	YNL245C	LAG2	Q92325	660 aa		4.22	□□□□□ -1.73
CWC25	YNL245C	COT1	P32798	439 aa		4.21	□□□□□ -1.74
CWC25	YNL245C	ZRT3	P34240	503 aa		4.21	□□□□□ -1.74
CWC25	YNL245C	HIS2	P38635	335 aa		4.21	□□□□□ -1.74
CWC25	YNL245C	UFE1	P41834	346 aa		4.21	□□□□□ -1.74
CWC25	YNL245C	AGP3	P43548	558 aa		4.21	□□□□□ -1.74
CWC25	YNL245C	MND1	P53102	219 aa		4.21	□□□□□ -1.74
CWC25	YNL245C	PGA2	P53903	129 aa		4.21	□□□□□ -1.74
CWC25	YNL245C	GMC1	Q04399	608 aa		4.21	□□□□□ -1.74
CWC25	YNL245C	BCP1	Q06338	283 aa		4.21	□□□□□ -1.74
CWC25	YNL245C	ASR1	Q06834	288 aa		4.21	□□□□□ -1.74
CWC25	YNL245C	FAB1	P34756	2278 aa		4.21	□□□□□ -1.74
CWC25	YNL245C	IRA1	P18963	3092 aa		4.2	□□□□□ -1.74
CWC25	YNL245C	OM45	P16547	393 aa		4.2	□□□□□ -1.74
CWC25	YNL245C	CKA2	P19454	339 aa		4.2	□□□□□ -1.74
CWC25	YNL245C	RSA4	P25382	515 aa	Known RBP	4.2	□□□□□ -1.74
CWC25	YNL245C	ZIP1	P31111	875 aa		4.2	□□□□□ -1.74
CWC25	YNL245C	HMT1	P38074	348 aa		4.2	□□□□□ -1.74
CWC25	YNL245C	SIP3	P38717	1229 aa		4.2	□□□□□ -1.74
CWC25	YNL245C	PEX18	P38855	283 aa		4.2	□□□□□ -1.74
CWC25	YNL245C	MOB1	P40484	314 aa		4.2	□□□□□ -1.74
CWC25	YNL245C	YPL077C	Q02831	240 aa		4.2	□□□□□ -1.74
CWC25	YNL245C	VTI1	Q04338	217 aa		4.2	□□□□□ -1.74
CWC25	YNL245C	BER1	Q06688	274 aa	Known RBP	4.2	□□□□□ -1.74
CWC25	YNL245C	YOR292C	Q08743	309 aa		4.2	□□□□□ -1.74
CWC25	YNL245C	RRP42	Q12277	265 aa	Predicted RBP	4.2	□□□□□ -1.74
CWC25	YNL245C	TFC7	Q12415	435 aa		4.2	□□□□□ -1.74
CWC25	YNL245C	YDL012C	Q12489	107 aa		4.2	□□□□□ -1.74
CWC25	YNL245C	FMP16	Q12497	93 aa		4.2	□□□□□ -1.74
CWC25	YNL245C	ATP6	P00854	259 aa		4.19	□□□□□ -1.74
CWC25	YNL245C	COX10	P21592	462 aa		4.19	□□□□□ -1.74
CWC25	YNL245C	SKG6	P32900	734 aa	Predicted RBP	4.19	□□□□□ -1.74
CWC25	YNL245C	YKL063C	P35725	167 aa		4.19	□□□□□ -1.74
CWC25	YNL245C	YBR062C	P38239	180 aa		4.19	□□□□□ -1.74
CWC25	YNL245C	RNY1	Q02933	434 aa	Known RBP	4.19	□□□□□ -1.74
CWC25	YNL245C	ECM19	Q06011	112 aa		4.19	□□□□□ -1.74
CWC25	YNL245C	VIK1	Q12045	647 aa		4.19	□□□□□ -1.74
CWC25	YNL245C	YPL150W	Q12152	901 aa		4.19	□□□□□ -1.74
CWC25	YNL245C	YPR064W	Q12492	139 aa		4.19	□□□□□ -1.74
CWC25	YNL245C	DFM1	Q12743	341 aa	Known RBP	4.19	□□□□□ -1.74
CWC25	YNL245C	FMP27	Q06179	2628 aa		4.18	□□□□□ -1.74
CWC25	YNL245C	HAP2	P06774	265 aa		4.18	□□□□□ -1.74
CWC25	YNL245C	IMP3	P32899	183 aa	Predicted RBP	4.18	□□□□□ -1.74
CWC25	YNL245C	GPX1	P36014	167 aa		4.18	□□□□□ -1.74
CWC25	YNL245C	RPC37	P36121	282 aa		4.18	□□□□□ -1.74
CWC25	YNL245C	SEC13	Q04491	297 aa	Known RBP	4.18	□□□□□ -1.74
CWC25	YNL245C	MRX8	Q05473	314 aa		4.18	□□□□□ -1.74
CWC25	YNL245C	POM33	Q12164	279 aa		4.18	□□□□□ -1.74
CWC25	YNL245C	PRP46	Q12417	451 aa	Predicted RBP	4.18	□□□□□ -1.74
CWC25	YNL245C	FUS3	P16892	353 aa	Known RBP	4.17	□□□□□ -1.74
CWC25	YNL245C	IFM1	P25038	676 aa		4.17	□□□□□ -1.74
CWC25	YNL245C	RIB7	P33312	244 aa		4.17	□□□□□ -1.74

Retrieved 100 of 5,963 RNA–protein pairs in 11.7 ms