RNA–Protein interactions for RNA: YNL138W-A

YSF3, Transcript of Component of the SF3b subcomplex of the U2 snRNP, yeastyeast

Gene YSF3, Length 258 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YSF3YNL138W-A CDC36P06100 191 aaPredicted RBP2.75□□□□□ -1.97
YSF3YNL138W-A YFR010W-AP0C5N0 62 aa2.75□□□□□ -1.97
YSF3YNL138W-A ARF1P11076 181 aaKnown RBP2.75□□□□□ -1.97
YSF3YNL138W-A ZIP1P31111 875 aa2.75□□□□□ -1.97
YSF3YNL138W-A TPS2P31688 896 aaKnown RBP2.75□□□□□ -1.97
YSF3YNL138W-A RAD5P32849 1169 aaPredicted RBP2.75□□□□□ -1.97
YSF3YNL138W-A SUI1P32911 108 aaKnown RBP2.75□□□□□ -1.97
YSF3YNL138W-A TIR2P33890 251 aa2.75□□□□□ -1.97
YSF3YNL138W-A YPT52P36018 234 aaKnown RBP2.75□□□□□ -1.97
YSF3YNL138W-A MRP21P38175 177 aa2.75□□□□□ -1.97
YSF3YNL138W-A YBR062CP38239 180 aa2.75□□□□□ -1.97
YSF3YNL138W-A SPP381P38282 291 aaPredicted RBP2.75□□□□□ -1.97
YSF3YNL138W-A YHL037CP38733 133 aa2.75□□□□□ -1.97
YSF3YNL138W-A RRF1P38771 230 aa2.75□□□□□ -1.97
YSF3YNL138W-A YHR177WP38867 453 aa2.75□□□□□ -1.97
YSF3YNL138W-A PRP39P39682 629 aaKnown RBP2.75□□□□□ -1.97
YSF3YNL138W-A YNL208WP40159 199 aaKnown RBP2.75□□□□□ -1.97
YSF3YNL138W-A PRE6P40303 254 aaKnown RBP2.75□□□□□ -1.97
YSF3YNL138W-A YFL051CP43552 160 aa2.75□□□□□ -1.97
YSF3YNL138W-A MNN5P46982 586 aa2.75□□□□□ -1.97
YSF3YNL138W-A EMC2P47133 292 aaKnown RBP2.75□□□□□ -1.97
YSF3YNL138W-A YGR067CP53243 804 aa2.75□□□□□ -1.97
YSF3YNL138W-A CLD1P53264 445 aa2.75□□□□□ -1.97
YSF3YNL138W-A MIX14Q04341 121 aa2.75□□□□□ -1.97
YSF3YNL138W-A YPR174CQ06616 221 aaPredicted RBP2.75□□□□□ -1.97
YSF3YNL138W-A PML1Q07930 204 aaPredicted RBP2.75□□□□□ -1.97
YSF3YNL138W-A REX3Q12090 404 aa2.75□□□□□ -1.97
YSF3YNL138W-A FCY22Q12119 530 aa2.75□□□□□ -1.97
YSF3YNL138W-A SKS1Q12505 502 aa2.75□□□□□ -1.97
YSF3YNL138W-A FOL3Q12676 427 aaPredicted RBP2.75□□□□□ -1.97
YSF3YNL138W-A CDC37P06101 506 aaKnown RBP2.74□□□□□ -1.97
YSF3YNL138W-A DAP2P18962 818 aa2.74□□□□□ -1.97
YSF3YNL138W-A YCR099CP25657 155 aa2.74□□□□□ -1.97
YSF3YNL138W-A IES6P32617 166 aa2.74□□□□□ -1.97
YSF3YNL138W-A MRPS5P33759 307 aa2.74□□□□□ -1.97
YSF3YNL138W-A YSW1P38280 609 aa2.74□□□□□ -1.97
YSF3YNL138W-A GGC1P38988 300 aa2.74□□□□□ -1.97
YSF3YNL138W-A YER188WP40103 239 aa2.74□□□□□ -1.97
YSF3YNL138W-A MPS2P53159 387 aa2.74□□□□□ -1.97
YSF3YNL138W-A MGR3Q04472 501 aa2.74□□□□□ -1.97
YSF3YNL138W-A LDS2Q08218 356 aa2.74□□□□□ -1.97
YSF3YNL138W-A LDB17Q12342 491 aa2.74□□□□□ -1.97
YSF3YNL138W-A YDL199CQ12407 687 aa2.74□□□□□ -1.97
YSF3YNL138W-A HTZ1Q12692 134 aaKnown RBP2.74□□□□□ -1.97
YSF3YNL138W-A SPO24Q3E752 67 aa2.74□□□□□ -1.97
YSF3YNL138W-A CDC50P25656 391 aa2.73□□□□□ -1.97
YSF3YNL138W-A YET1P35723 206 aa2.73□□□□□ -1.97
YSF3YNL138W-A YKT6P36015 200 aaKnown RBP2.73□□□□□ -1.97
YSF3YNL138W-A MAK5P38112 773 aaPredicted RBP2.73□□□□□ -1.97
YSF3YNL138W-A PRS3P38689 320 aaKnown RBP2.73□□□□□ -1.97
YSF3YNL138W-A SEO1P39709 593 aa2.73□□□□□ -1.97
YSF3YNL138W-A MEP1P40260 492 aa2.73□□□□□ -1.97
YSF3YNL138W-A YGR015CP53208 328 aa2.73□□□□□ -1.97
YSF3YNL138W-A PET117Q02771 107 aa2.73□□□□□ -1.97
YSF3YNL138W-A GAS3Q03655 524 aa2.73□□□□□ -1.97
YSF3YNL138W-A ERV41Q04651 352 aa2.73□□□□□ -1.97
YSF3YNL138W-A YDR278CQ05612 105 aa2.73□□□□□ -1.97
YSF3YNL138W-A BOP2Q06150 570 aa2.73□□□□□ -1.97
YSF3YNL138W-A IPK1Q06667 281 aa2.73□□□□□ -1.97
YSF3YNL138W-A HEM4P06174 275 aa2.72□□□□□ -1.97
YSF3YNL138W-A RAD10P06838 210 aa2.72□□□□□ -1.97
YSF3YNL138W-A YSF3P0C074 85 aaPredicted RBP2.72□□□□□ -1.97
YSF3YNL138W-A RNA1P11745 407 aaKnown RBP2.72□□□□□ -1.97
YSF3YNL138W-A NSP1P14907 823 aaKnown RBP2.72□□□□□ -1.97
YSF3YNL138W-A FUN26P31381 517 aa2.72□□□□□ -1.97
YSF3YNL138W-A GDS1P41913 522 aa2.72□□□□□ -1.97
YSF3YNL138W-A YJR141WP47172 347 aaPredicted RBP2.72□□□□□ -1.97
YSF3YNL138W-A YJR149WP47177 404 aa2.72□□□□□ -1.97
YSF3YNL138W-A PGU1P47180 361 aa2.72□□□□□ -1.97
YSF3YNL138W-A KAP114P53067 1004 aa2.72□□□□□ -1.97
YSF3YNL138W-A MRPS16Q02608 121 aa2.72□□□□□ -1.97
YSF3YNL138W-A YDL114WQ07530 308 aa2.72□□□□□ -1.97
YSF3YNL138W-A RRP40Q08285 240 aaKnown RBP2.72□□□□□ -1.97
YSF3YNL138W-A SLD7Q08457 257 aa2.72□□□□□ -1.97
YSF3YNL138W-A PCL9Q12477 304 aa2.72□□□□□ -1.97
YSF3YNL138W-A TFB5Q3E7C1 72 aaPredicted RBP2.72□□□□□ -1.97
YSF3YNL138W-A MET2P08465 486 aa2.71□□□□□ -1.98
YSF3YNL138W-A SPO23P33757 523 aa2.71□□□□□ -1.98
YSF3YNL138W-A FRT2P39734 528 aa2.71□□□□□ -1.98
YSF3YNL138W-A AVT7P40501 490 aa2.71□□□□□ -1.98
YSF3YNL138W-A MNT4P53745 580 aa2.71□□□□□ -1.98
YSF3YNL138W-A VTI1Q04338 217 aa2.71□□□□□ -1.98
YSF3YNL138W-A YHC1Q05900 231 aaKnown RBP2.71□□□□□ -1.98
YSF3YNL138W-A GAL3P13045 520 aa2.7□□□□□ -1.98
YSF3YNL138W-A APQ12P40532 138 aa2.7□□□□□ -1.98
YSF3YNL138W-A YNR068CP53754 272 aa2.7□□□□□ -1.98
YSF3YNL138W-A YMR111CQ04461 462 aaPredicted RBP2.7□□□□□ -1.98
YSF3YNL138W-A SEI1Q06058 285 aa2.7□□□□□ -1.98
YSF3YNL138W-A YFH1Q07540 174 aa2.7□□□□□ -1.98
YSF3YNL138W-A GAT3Q07928 141 aa2.7□□□□□ -1.98
YSF3YNL138W-A YDL012CQ12489 107 aa2.7□□□□□ -1.98
YSF3YNL138W-A SFG1Q12507 346 aa2.7□□□□□ -1.98
YSF3YNL138W-A CBP6P07253 162 aaPredicted RBP2.69□□□□□ -1.98
YSF3YNL138W-A ZRC1P20107 442 aa2.69□□□□□ -1.98
YSF3YNL138W-A GPI12P23797 304 aa2.69□□□□□ -1.98
YSF3YNL138W-A PCL7P40186 285 aa2.69□□□□□ -1.98
YSF3YNL138W-A KEG1P43614 200 aa2.69□□□□□ -1.98
YSF3YNL138W-A MPA43P53583 542 aaPredicted RBP2.69□□□□□ -1.98
YSF3YNL138W-A REX2P54964 269 aaKnown RBP2.69□□□□□ -1.98
YSF3YNL138W-A APC4Q04601 652 aa2.69□□□□□ -1.98
Retrieved 100 of 5,963 RNA–protein pairs in 42.4 ms