RNA–Protein interactions for RNA: YNL081C

SWS2, Transcript of Putative mitochondrial ribosomal protein of the small subunit, yeastyeast

Gene SWS2, Length 432 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SWS2YNL081C CTS2Q06350 511 aa1.56□□□□□ -2.16
SWS2YNL081C YOR114WQ12219 294 aa1.56□□□□□ -2.16
SWS2YNL081C ATP6P00854 259 aa1.55□□□□□ -2.16
SWS2YNL081C ILV1P00927 576 aaKnown RBP1.55□□□□□ -2.16
SWS2YNL081C GCD2P12754 651 aaPredicted RBP1.55□□□□□ -2.16
SWS2YNL081C CAM1P29547 415 aaKnown RBP1.55□□□□□ -2.16
SWS2YNL081C RPC25P35718 212 aa1.55□□□□□ -2.16
SWS2YNL081C MRPL49P40858 161 aaPredicted RBP1.55□□□□□ -2.16
SWS2YNL081C DAN1P47178 298 aa1.55□□□□□ -2.16
SWS2YNL081C MND1P53102 219 aa1.55□□□□□ -2.16
SWS2YNL081C EMC6Q12431 108 aa1.55□□□□□ -2.16
SWS2YNL081C TOM40P23644 387 aaKnown RBP1.54□□□□□ -2.16
SWS2YNL081C YJL016WP47072 561 aa1.54□□□□□ -2.16
SWS2YNL081C VPS60Q03390 229 aa1.54□□□□□ -2.16
SWS2YNL081C BER1Q06688 274 aaKnown RBP1.54□□□□□ -2.16
SWS2YNL081C YOL019WQ08157 551 aa1.54□□□□□ -2.16
SWS2YNL081C YOR268CQ08734 132 aa1.54□□□□□ -2.16
SWS2YNL081C RAD10P06838 210 aa1.53□□□□□ -2.16
SWS2YNL081C PET494P07390 489 aaPredicted RBP1.53□□□□□ -2.16
SWS2YNL081C CSG2P35206 410 aa1.53□□□□□ -2.16
SWS2YNL081C YHL026CP38740 315 aa1.53□□□□□ -2.16
SWS2YNL081C YDR089WP38966 869 aa1.53□□□□□ -2.16
SWS2YNL081C MNN9P39107 395 aaKnown RBP1.53□□□□□ -2.16
SWS2YNL081C AGP3P43548 558 aa1.53□□□□□ -2.16
SWS2YNL081C YPL039WQ03080 316 aa1.53□□□□□ -2.16
SWS2YNL081C RRG8Q06109 277 aa1.53□□□□□ -2.16
SWS2YNL081C VAC14Q06708 880 aa1.53□□□□□ -2.16
SWS2YNL081C POM33Q12164 279 aa1.53□□□□□ -2.16
SWS2YNL081C SMT3Q12306 101 aaKnown RBP1.53□□□□□ -2.16
SWS2YNL081C YBL112CQ3E7Y4 105 aa1.53□□□□□ -2.16
SWS2YNL081C ATG15P25641 520 aa1.52□□□□□ -2.17
SWS2YNL081C ICL1P28240 557 aaPredicted RBP1.52□□□□□ -2.17
SWS2YNL081C HIS2P38635 335 aa1.52□□□□□ -2.17
SWS2YNL081C GRE3P38715 327 aaKnown RBP RIP-Chip data1.52□□□□□ -2.17not detected
SWS2YNL081C ECM18Q04623 453 aa1.52□□□□□ -2.17
SWS2YNL081C DCR2Q05924 578 aa1.52□□□□□ -2.17
SWS2YNL081C NOT5Q12514 560 aaPredicted RBP1.52□□□□□ -2.17
SWS2YNL081C YAL064W-BO13512 126 aa1.51□□□□□ -2.17
SWS2YNL081C STF1P01098 86 aa1.51□□□□□ -2.17
SWS2YNL081C TPM1P17536 199 aaKnown RBP1.51□□□□□ -2.17
SWS2YNL081C SFC1P33303 322 aa1.51□□□□□ -2.17
SWS2YNL081C DRE2P36152 348 aa1.51□□□□□ -2.17
SWS2YNL081C HMT1P38074 348 aa1.51□□□□□ -2.17
SWS2YNL081C TIF34P40217 347 aaKnown RBP1.51□□□□□ -2.17
SWS2YNL081C TAD2P47058 250 aa1.51□□□□□ -2.17
SWS2YNL081C PRO2P54885 456 aaKnown RBP1.51□□□□□ -2.17
SWS2YNL081C YMR114CQ04471 368 aaKnown RBP1.51□□□□□ -2.17
SWS2YNL081C BCP1Q06338 283 aa1.51□□□□□ -2.17
SWS2YNL081C CUR1Q06469 252 aa1.51□□□□□ -2.17
SWS2YNL081C YHR086W-AQ3E746 53 aa1.51□□□□□ -2.17
SWS2YNL081C RAD3P06839 778 aa1.5□□□□□ -2.17
SWS2YNL081C DPB2P24482 689 aaPredicted RBP1.5□□□□□ -2.17
SWS2YNL081C CSM1P25651 190 aa1.5□□□□□ -2.17
SWS2YNL081C ARN2P38724 620 aa1.5□□□□□ -2.17
SWS2YNL081C VPS45P38932 577 aa1.5□□□□□ -2.17
SWS2YNL081C TEM1P38987 245 aa1.5□□□□□ -2.17
SWS2YNL081C GON7P46984 123 aa1.5□□□□□ -2.17
SWS2YNL081C IBA57P47158 497 aa1.5□□□□□ -2.17
SWS2YNL081C NIF3P53081 288 aa1.5□□□□□ -2.17
SWS2YNL081C FMP41P53889 259 aaKnown RBP1.5□□□□□ -2.17
SWS2YNL081C ABZ2Q03266 374 aa1.5□□□□□ -2.17
SWS2YNL081C SDC1Q03323 175 aa1.5□□□□□ -2.17
SWS2YNL081C GPI12P23797 304 aa1.49□□□□□ -2.17
SWS2YNL081C LOC1P43586 204 aaPredicted RBP1.49□□□□□ -2.17
SWS2YNL081C YFR054CP43622 192 aa1.49□□□□□ -2.17
SWS2YNL081C CPD1P53314 239 aa1.49□□□□□ -2.17
SWS2YNL081C SEC10Q06245 871 aa1.49□□□□□ -2.17
SWS2YNL081C PST1Q12355 444 aa1.49□□□□□ -2.17
SWS2YNL081C KRR1P25586 316 aaPredicted RBP1.48□□□□□ -2.17
SWS2YNL081C PEX3P28795 441 aa1.48□□□□□ -2.17
SWS2YNL081C RNP1P32385 249 aa1.48□□□□□ -2.17
SWS2YNL081C SCM4P32564 187 aa1.48□□□□□ -2.17
SWS2YNL081C YOR062CP36025 268 aa1.48□□□□□ -2.17
SWS2YNL081C NPT1P39683 429 aaKnown RBP1.48□□□□□ -2.17
SWS2YNL081C FCY21P40039 528 aa1.48□□□□□ -2.17
SWS2YNL081C OSW5P40219 148 aa1.48□□□□□ -2.17
SWS2YNL081C PEX31P53203 462 aa1.48□□□□□ -2.17
SWS2YNL081C TRM44Q02648 567 aaKnown RBP1.48□□□□□ -2.17
SWS2YNL081C EBS1Q03466 884 aaKnown RBP1.48□□□□□ -2.17
SWS2YNL081C REX3Q12090 404 aa1.48□□□□□ -2.17
SWS2YNL081C PER33Q12144 273 aa1.48□□□□□ -2.17
SWS2YNL081C BOL1Q3E793 110 aa1.48□□□□□ -2.17
SWS2YNL081C RPS3P05750 240 aaKnown RBP1.47□□□□□ -2.17
SWS2YNL081C RPL4AP10664 362 aaKnown RBP1.47□□□□□ -2.17
SWS2YNL081C GDH2P33327 1092 aaKnown RBP1.47□□□□□ -2.17
SWS2YNL081C AGX1P43567 385 aa1.47□□□□□ -2.17
SWS2YNL081C YJL118WP47022 219 aa1.47□□□□□ -2.17
SWS2YNL081C YJL027CP47063 138 aaPredicted RBP1.47□□□□□ -2.17
SWS2YNL081C RPL4BP49626 362 aaKnown RBP1.47□□□□□ -2.17
SWS2YNL081C SLX9P53251 210 aaPredicted RBP1.47□□□□□ -2.17
SWS2YNL081C SFH1Q06168 426 aa1.47□□□□□ -2.17
SWS2YNL081C YPL247CQ12523 523 aa1.47□□□□□ -2.17
SWS2YNL081C YOS9Q99220 542 aa1.47□□□□□ -2.17
SWS2YNL081C UGA1P17649 471 aa1.46□□□□□ -2.18
SWS2YNL081C TIM21P53220 239 aa1.46□□□□□ -2.18
SWS2YNL081C CAB4P53332 305 aa1.46□□□□□ -2.18
SWS2YNL081C YNL260CP53846 198 aa1.46□□□□□ -2.18
SWS2YNL081C ASI3P53983 676 aa1.46□□□□□ -2.18
SWS2YNL081C PEX12Q04370 399 aa1.46□□□□□ -2.18
SWS2YNL081C LOA1Q06508 300 aa1.46□□□□□ -2.18
Retrieved 100 of 5,963 RNA–protein pairs in 13.8 ms