RNA–Protein interactions for RNA: YNL016W

PUB1, Transcript of Poly (A)+ RNA-binding protein, yeastyeast

Gene PUB1, Length 1,362 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PUB1YNL016W IZH4Q99393 312 aa3.49□□□□□ -1.85
PUB1YNL016W AMD1P15274 810 aaKnown RBP3.48□□□□□ -1.85
PUB1YNL016W COQ3P27680 312 aa3.48□□□□□ -1.85
PUB1YNL016W NAM9P27929 486 aa3.48□□□□□ -1.85
PUB1YNL016W ATO2P32907 282 aa3.48□□□□□ -1.85
PUB1YNL016W YKL063CP35725 167 aa3.48□□□□□ -1.85
PUB1YNL016W GPX2P38143 162 aa3.48□□□□□ -1.85
PUB1YNL016W RIB5P38145 238 aa3.48□□□□□ -1.85
PUB1YNL016W ECM8P38246 354 aa3.48□□□□□ -1.85
PUB1YNL016W FZO1P38297 855 aa3.48□□□□□ -1.85
PUB1YNL016W FRT2P39734 528 aa3.48□□□□□ -1.85
PUB1YNL016W PAC2P39937 518 aa3.48□□□□□ -1.85
PUB1YNL016W YER121WP40076 114 aa3.48□□□□□ -1.85
PUB1YNL016W GDS1P41913 522 aa3.48□□□□□ -1.85
PUB1YNL016W QRI1P43123 477 aaKnown RBP3.48□□□□□ -1.85
PUB1YNL016W LSM1P47017 172 aaKnown RBP3.48□□□□□ -1.85
PUB1YNL016W YJL043WP47053 257 aa3.48□□□□□ -1.85
PUB1YNL016W MST27P53176 234 aa3.48□□□□□ -1.85
PUB1YNL016W COS1P53822 381 aa3.48□□□□□ -1.85
PUB1YNL016W CTF19Q02732 369 aa3.48□□□□□ -1.85
PUB1YNL016W CTL1Q03220 320 aaKnown RBP3.48□□□□□ -1.85
PUB1YNL016W ARO80Q04052 950 aa3.48□□□□□ -1.85
PUB1YNL016W PEX10Q05568 337 aa3.48□□□□□ -1.85
PUB1YNL016W GLO2Q05584 274 aa3.48□□□□□ -1.85
PUB1YNL016W SEC10Q06245 871 aa3.48□□□□□ -1.85
PUB1YNL016W YLR012CQ07927 99 aa3.48□□□□□ -1.85
PUB1YNL016W YOL073CQ08232 322 aa3.48□□□□□ -1.85
PUB1YNL016W POM33Q12164 279 aa3.48□□□□□ -1.85
PUB1YNL016W DCN1Q12395 269 aa3.48□□□□□ -1.85
PUB1YNL016W EXO70P19658 623 aa3.47□□□□□ -1.85
PUB1YNL016W SLY1P22213 666 aa3.47□□□□□ -1.85
PUB1YNL016W POF1P25576 258 aa3.47□□□□□ -1.85
PUB1YNL016W TIP1P27654 210 aaPredicted RBP3.47□□□□□ -1.85
PUB1YNL016W CDC13P32797 924 aaKnown RBP3.47□□□□□ -1.85
PUB1YNL016W TIR2P33890 251 aa3.47□□□□□ -1.85
PUB1YNL016W PHD1P36093 366 aa3.47□□□□□ -1.85
PUB1YNL016W SPC34P36131 295 aa3.47□□□□□ -1.85
PUB1YNL016W FIG1P38224 298 aa3.47□□□□□ -1.85
PUB1YNL016W POP7P38291 140 aa3.47□□□□□ -1.85
PUB1YNL016W AME1P38313 324 aa3.47□□□□□ -1.85
PUB1YNL016W SOP4P39543 234 aaPredicted RBP3.47□□□□□ -1.85
PUB1YNL016W PTI1P39927 425 aaPredicted RBP3.47□□□□□ -1.85
PUB1YNL016W RPH1P39956 796 aa3.47□□□□□ -1.85
PUB1YNL016W SMB1P40018 196 aaKnown RBP3.47□□□□□ -1.85
PUB1YNL016W PRE6P40303 254 aaKnown RBP3.47□□□□□ -1.85
PUB1YNL016W ALG8P40351 577 aa3.47□□□□□ -1.85
PUB1YNL016W PMT4P46971 762 aa3.47□□□□□ -1.85
PUB1YNL016W PHO23P50947 330 aa3.47□□□□□ -1.85
PUB1YNL016W YNL140CP53910 189 aa3.47□□□□□ -1.85
PUB1YNL016W ERG13P54839 491 aaKnown RBP3.47□□□□□ -1.85
PUB1YNL016W ODC1Q03028 310 aa3.47□□□□□ -1.85
PUB1YNL016W PIR1Q03178 341 aa3.47□□□□□ -1.85
PUB1YNL016W YDR209CQ03480 137 aa3.47□□□□□ -1.85
PUB1YNL016W YMR114CQ04471 368 aaKnown RBP3.47□□□□□ -1.85
PUB1YNL016W TAF9Q05027 157 aa3.47□□□□□ -1.85
PUB1YNL016W MHR1Q06630 226 aa3.47□□□□□ -1.85
PUB1YNL016W MFG1Q07684 458 aa3.47□□□□□ -1.85
PUB1YNL016W YLR046CQ12253 270 aa3.47□□□□□ -1.85
PUB1YNL016W TPI1P00942 248 aaKnown RBP3.46□□□□□ -1.86
PUB1YNL016W YAR066WP0CX18 203 aa3.46□□□□□ -1.86
PUB1YNL016W YHR214WP0CX19 203 aa3.46□□□□□ -1.86
PUB1YNL016W YCR100CP25606 316 aa3.46□□□□□ -1.86
PUB1YNL016W HOM6P31116 359 aaKnown RBP3.46□□□□□ -1.86
PUB1YNL016W TOD6P34219 525 aa3.46□□□□□ -1.86
PUB1YNL016W RFT1P38206 574 aaPredicted RBP3.46□□□□□ -1.86
PUB1YNL016W YHK8P38776 514 aa3.46□□□□□ -1.86
PUB1YNL016W GEP4P38812 185 aa3.46□□□□□ -1.86
PUB1YNL016W DHH1P39517 506 aaKnown RBP3.46□□□□□ -1.86
PUB1YNL016W YEL075CP39972 122 aa3.46□□□□□ -1.86
PUB1YNL016W YIA6P40556 373 aa3.46□□□□□ -1.86
PUB1YNL016W ADO1P47143 340 aaKnown RBP3.46□□□□□ -1.86
PUB1YNL016W EMC4P53073 190 aa3.46□□□□□ -1.86
PUB1YNL016W COG7P53195 279 aa3.46□□□□□ -1.86
PUB1YNL016W VAC7P53950 1165 aa3.46□□□□□ -1.86
PUB1YNL016W MRS2Q01926 470 aa3.46□□□□□ -1.86
PUB1YNL016W YMR027WQ04371 470 aa3.46□□□□□ -1.86
PUB1YNL016W YET3Q07451 203 aa3.46□□□□□ -1.86
PUB1YNL016W YAP7Q08182 245 aa3.46□□□□□ -1.86
PUB1YNL016W SME1Q12330 94 aaPredicted RBP3.46□□□□□ -1.86
PUB1YNL016W YLR111WQ12528 110 aa3.46□□□□□ -1.86
PUB1YNL016W SAL1D6W196 494 aa3.45□□□□□ -1.86
PUB1YNL016W TEF1P02994 458 aaKnown RBP3.45□□□□□ -1.86
PUB1YNL016W QCR2P07257 368 aa3.45□□□□□ -1.86
PUB1YNL016W RPL43AP0CX25 92 aaKnown RBP3.45□□□□□ -1.86
PUB1YNL016W RPL43BP0CX26 92 aa3.45□□□□□ -1.86
PUB1YNL016W SPT15P13393 240 aaKnown RBP3.45□□□□□ -1.86
PUB1YNL016W CAP2P13517 287 aa3.45□□□□□ -1.86
PUB1YNL016W EXG1P23776 448 aaKnown RBP3.45□□□□□ -1.86
PUB1YNL016W KAR9P32526 644 aa3.45□□□□□ -1.86
PUB1YNL016W CSG2P35206 410 aa3.45□□□□□ -1.86
PUB1YNL016W YNK1P36010 153 aaKnown RBP3.45□□□□□ -1.86
PUB1YNL016W MCH2P36032 473 aa3.45□□□□□ -1.86
PUB1YNL016W FRE2P36033 711 aa3.45□□□□□ -1.86
PUB1YNL016W RRP3P38712 501 aaKnown RBP3.45□□□□□ -1.86
PUB1YNL016W YKE4P40544 346 aa3.45□□□□□ -1.86
PUB1YNL016W GAB1P41733 394 aa3.45□□□□□ -1.86
PUB1YNL016W SFH5P47008 294 aa3.45□□□□□ -1.86
PUB1YNL016W YJR012CP47087 207 aa3.45□□□□□ -1.86
PUB1YNL016W YJR149WP47177 404 aa3.45□□□□□ -1.86
PUB1YNL016W UBC13P52490 153 aa3.45□□□□□ -1.86
Retrieved 100 of 5,963 RNA–protein pairs in 27.1 ms