RNA–Protein interactions for RNA: YLR378C

SEC61, Transcript of Conserved ER protein translocation channel, yeastyeast

Gene SEC61, Length 1,443 nt, Biotype protein coding, Subcellular localisation Mitochondria, Peroxisome .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SEC61YLR378C ASI3P53983 676 aa8.16□□□□□ -1.1
SEC61YLR378C PET191Q02772 108 aa8.16□□□□□ -1.1
SEC61YLR378C YDR209CQ03480 137 aa8.16□□□□□ -1.1
SEC61YLR378C RVB1Q03940 463 aaKnown RBP8.16□□□□□ -1.1
SEC61YLR378C YPR196WQ06595 470 aa8.16□□□□□ -1.1
SEC61YLR378C GRE1Q08969 168 aa8.16□□□□□ -1.1
SEC61YLR378C LYS21Q12122 440 aaKnown RBP8.16□□□□□ -1.1
SEC61YLR378C TY1A-BLQ12266 440 aa8.16□□□□□ -1.1
SEC61YLR378C SCEIP03882 235 aa8.15□□□□□ -1.1
SEC61YLR378C RPL6BP05739 176 aaKnown RBP8.15□□□□□ -1.1
SEC61YLR378C SPS2P08459 502 aa8.15□□□□□ -1.1
SEC61YLR378C GCD1P09032 578 aaPredicted RBP8.15□□□□□ -1.1
SEC61YLR378C MATALPHA1P0CY06 175 aa8.15□□□□□ -1.1
SEC61YLR378C HMLALPHA1P0CY07 175 aa8.15□□□□□ -1.1
SEC61YLR378C SEC62P21825 274 aa8.15□□□□□ -1.1
SEC61YLR378C DIE2P50076 525 aa8.15□□□□□ -1.1
SEC61YLR378C SAM50P53969 484 aa8.15□□□□□ -1.1
SEC61YLR378C MRPL13Q02204 264 aa8.15□□□□□ -1.1
SEC61YLR378C ASR1Q06834 288 aa8.15□□□□□ -1.1
SEC61YLR378C YHR214C-EQ8TGK0 99 aa8.15□□□□□ -1.1
SEC61YLR378C CTA1P15202 515 aa8.14□□□□□ -1.11
SEC61YLR378C PUP1P25043 261 aa8.14□□□□□ -1.11
SEC61YLR378C RNP1P32385 249 aa8.14□□□□□ -1.11
SEC61YLR378C AIM25P47140 327 aa8.14□□□□□ -1.11
SEC61YLR378C MCH4Q08268 501 aa8.14□□□□□ -1.11
SEC61YLR378C INP53Q12271 1107 aa8.14□□□□□ -1.11
SEC61YLR378C NAM2P11325 894 aa8.13□□□□□ -1.11
SEC61YLR378C CDC34P14682 295 aa8.13□□□□□ -1.11
SEC61YLR378C SAR1P20606 190 aaKnown RBP8.13□□□□□ -1.11
SEC61YLR378C MDH2P22133 377 aa8.13□□□□□ -1.11
SEC61YLR378C RPB10P22139 70 aa8.13□□□□□ -1.11
SEC61YLR378C NFS1P25374 497 aa8.13□□□□□ -1.11
SEC61YLR378C MRPL3P36516 390 aa8.13□□□□□ -1.11
SEC61YLR378C YER158CP40095 573 aa8.13□□□□□ -1.11
SEC61YLR378C VHT1P53241 593 aa8.13□□□□□ -1.11
SEC61YLR378C CTF19Q02732 369 aa8.13□□□□□ -1.11
SEC61YLR378C DIG2Q03373 323 aaKnown RBP8.13□□□□□ -1.11
SEC61YLR378C ORT1Q12375 292 aa8.13□□□□□ -1.11
SEC61YLR378C ERG4P25340 473 aa8.12□□□□□ -1.11
SEC61YLR378C ACH1P32316 526 aa8.12□□□□□ -1.11
SEC61YLR378C SNC2P33328 115 aa8.12□□□□□ -1.11
SEC61YLR378C FRM2P37261 193 aa8.12□□□□□ -1.11
SEC61YLR378C SSH1P38353 490 aaKnown RBP8.12□□□□□ -1.11
SEC61YLR378C SEC24P40482 926 aaKnown RBP8.12□□□□□ -1.11
SEC61YLR378C SYS1P41544 203 aa8.12□□□□□ -1.11
SEC61YLR378C CAT5P41735 233 aa8.12□□□□□ -1.11
SEC61YLR378C MNN5P46982 586 aa8.12□□□□□ -1.11
SEC61YLR378C POP6P53218 158 aa8.12□□□□□ -1.11
SEC61YLR378C PBP1P53297 722 aaKnown RBP8.12□□□□□ -1.11
SEC61YLR378C SCW4P53334 386 aaKnown RBP8.12□□□□□ -1.11
SEC61YLR378C GIM3P53900 129 aa8.12□□□□□ -1.11
SEC61YLR378C NRK1P53915 240 aa8.12□□□□□ -1.11
SEC61YLR378C YDR102CQ03864 110 aa8.12□□□□□ -1.11
SEC61YLR378C KEI1Q06346 221 aa8.12□□□□□ -1.11
SEC61YLR378C YRM1Q12340 786 aa8.12□□□□□ -1.11
SEC61YLR378C CSF1Q12150 2958 aa8.12□□□□□ -1.11
SEC61YLR378C ATG22P25568 528 aa8.12□□□□□ -1.11
SEC61YLR378C NAB2P32505 525 aaKnown RBP RIP-Chip data8.12□□□□□ -1.11not detected
SEC61YLR378C SOF1P33750 489 aaKnown RBP8.12□□□□□ -1.11
SEC61YLR378C YHR122WP38829 231 aa8.12□□□□□ -1.11
SEC61YLR378C MSY1P48527 492 aa8.12□□□□□ -1.11
SEC61YLR378C HSV2P50079 448 aaPredicted RBP8.12□□□□□ -1.11
SEC61YLR378C KAP120Q02932 1032 aa8.12□□□□□ -1.11
SEC61YLR378C YOL024WQ08172 172 aa8.12□□□□□ -1.11
SEC61YLR378C TGS1Q12052 315 aa8.12□□□□□ -1.11
SEC61YLR378C TOR2P32600 2474 aaKnown RBP8.11□□□□□ -1.11
SEC61YLR378C CDC23P16522 626 aa8.11□□□□□ -1.11
SEC61YLR378C MKS1P34072 584 aa8.11□□□□□ -1.11
SEC61YLR378C KAE1P36132 386 aa8.11□□□□□ -1.11
SEC61YLR378C PUG1P40100 303 aa8.11□□□□□ -1.11
SEC61YLR378C UBX6P47049 396 aa8.11□□□□□ -1.11
SEC61YLR378C LOH1P47055 219 aa8.11□□□□□ -1.11
SEC61YLR378C AAH1P53909 347 aa8.11□□□□□ -1.11
SEC61YLR378C MRPS16Q02608 121 aa8.11□□□□□ -1.11
SEC61YLR378C UTP15Q04305 513 aaKnown RBP8.11□□□□□ -1.11
SEC61YLR378C ENV7Q12003 364 aa8.11□□□□□ -1.11
SEC61YLR378C FSH3Q99369 266 aa8.11□□□□□ -1.11
SEC61YLR378C Q0144Q9ZZW2 109 aa8.11□□□□□ -1.11
SEC61YLR378C RAD52P06778 471 aaKnown RBP8.1□□□□□ -1.11
SEC61YLR378C PRB1P09232 635 aa8.1□□□□□ -1.11
SEC61YLR378C HXT2P23585 541 aa8.1□□□□□ -1.11
SEC61YLR378C RNA14P25298 677 aaKnown RBP8.1□□□□□ -1.11
SEC61YLR378C DBF20P32328 564 aa8.1□□□□□ -1.11
SEC61YLR378C PPQ1P32945 549 aa8.1□□□□□ -1.11
SEC61YLR378C ERJ5P43613 295 aaPredicted RBP8.1□□□□□ -1.11
SEC61YLR378C GPI14P47088 403 aaKnown RBP8.1□□□□□ -1.11
SEC61YLR378C GPG1P53130 126 aa8.1□□□□□ -1.11
SEC61YLR378C ATG4P53867 494 aa8.1□□□□□ -1.11
SEC61YLR378C FRE3Q08905 711 aa8.1□□□□□ -1.11
SEC61YLR378C SRL2Q12020 392 aa8.1□□□□□ -1.11
SEC61YLR378C FUR4P05316 633 aaKnown RBP8.09□□□□□ -1.11
SEC61YLR378C CBP6P07253 162 aaPredicted RBP8.09□□□□□ -1.11
SEC61YLR378C DIT1P21623 536 aa8.09□□□□□ -1.11
SEC61YLR378C PPG1P32838 368 aa8.09□□□□□ -1.11
SEC61YLR378C CLG1P35190 452 aa8.09□□□□□ -1.11
SEC61YLR378C TAT1P38085 619 aa8.09□□□□□ -1.11
SEC61YLR378C YBR096WP38256 230 aa8.09□□□□□ -1.11
SEC61YLR378C BOL3P39724 118 aa8.09□□□□□ -1.11
SEC61YLR378C AVT7P40501 490 aa8.09□□□□□ -1.11
SEC61YLR378C PRY1P47032 299 aa8.09□□□□□ -1.11
Retrieved 100 of 5,963 RNA–protein pairs in 78.3 ms