RNA–Protein interactions for RNA: YLR336C

SGD1, Transcript of Essential nuclear protein, yeastyeast

Gene SGD1, Length 2,700 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SGD1YLR336C YAL064W-BO13512 126 aa1.44□□□□□ -2.18
SGD1YLR336C CAT2P32796 670 aaKnown RBP1.44□□□□□ -2.18
SGD1YLR336C SKI2P35207 1287 aaKnown RBP RIP-Chip data1.44□□□□□ -2.18not detected
SGD1YLR336C MED8P38304 223 aa1.44□□□□□ -2.18
SGD1YLR336C PRM9P39551 298 aa1.44□□□□□ -2.18
SGD1YLR336C NPT1P39683 429 aaKnown RBP1.44□□□□□ -2.18
SGD1YLR336C SPO73P40031 143 aa1.44□□□□□ -2.18
SGD1YLR336C YER084WP40057 128 aa1.44□□□□□ -2.18
SGD1YLR336C NBP1P52919 319 aaPredicted RBP1.44□□□□□ -2.18
SGD1YLR336C KAP114P53067 1004 aa1.44□□□□□ -2.18
SGD1YLR336C MNT4P53745 580 aa1.44□□□□□ -2.18
SGD1YLR336C TRM44Q02648 567 aaKnown RBP1.44□□□□□ -2.18
SGD1YLR336C YPL039WQ03080 316 aa1.44□□□□□ -2.18
SGD1YLR336C SEC10Q06245 871 aa1.44□□□□□ -2.18
SGD1YLR336C PRR2Q12310 699 aa1.44□□□□□ -2.18
SGD1YLR336C YOL163WP0CF20 169 aa1.44□□□□□ -2.18
SGD1YLR336C OSM1P21375 501 aaKnown RBP1.44□□□□□ -2.18
SGD1YLR336C KRE6P32486 720 aa1.44□□□□□ -2.18
SGD1YLR336C TKL2P33315 681 aa1.44□□□□□ -2.18
SGD1YLR336C TAD2P47058 250 aa1.44□□□□□ -2.18
SGD1YLR336C MPP6P53725 186 aaPredicted RBP1.44□□□□□ -2.18
SGD1YLR336C OST6Q03723 332 aa1.44□□□□□ -2.18
SGD1YLR336C YMR166CQ03829 368 aa1.44□□□□□ -2.18
SGD1YLR336C RRT8Q08219 342 aa1.44□□□□□ -2.18
SGD1YLR336C PER33Q12144 273 aa1.44□□□□□ -2.18
SGD1YLR336C YBL112CQ3E7Y4 105 aa1.44□□□□□ -2.18
SGD1YLR336C YMR316C-AI2HB70 103 aa1.43□□□□□ -2.18
SGD1YLR336C IME2P32581 645 aa1.43□□□□□ -2.18
SGD1YLR336C ARN2P38724 620 aa1.43□□□□□ -2.18
SGD1YLR336C YAR1P46683 200 aa1.43□□□□□ -2.18
SGD1YLR336C YNL095CP53932 642 aa1.43□□□□□ -2.18
SGD1YLR336C LAP3Q01532 483 aaKnown RBP RIP-Chip data1.43□□□□□ -2.18not detected
SGD1YLR336C YOS9Q99220 542 aa1.43□□□□□ -2.18
SGD1YLR336C PAN1P32521 1480 aa1.43□□□□□ -2.18
SGD1YLR336C RPL24AP04449 155 aaKnown RBP1.43□□□□□ -2.18
SGD1YLR336C PEX3P28795 441 aa1.43□□□□□ -2.18
SGD1YLR336C HMT1P38074 348 aa1.43□□□□□ -2.18
SGD1YLR336C TRM7P38238 310 aaKnown RBP1.43□□□□□ -2.18
SGD1YLR336C PHO89P38361 574 aa1.43□□□□□ -2.18
SGD1YLR336C PET100P38958 111 aa1.43□□□□□ -2.18
SGD1YLR336C TVP15Q03860 143 aa1.43□□□□□ -2.18
SGD1YLR336C CTR3Q06686 241 aa1.43□□□□□ -2.18
SGD1YLR336C AI5_BETAQ9ZZX0 354 aa1.43□□□□□ -2.18
SGD1YLR336C COS2P0CX12 379 aa1.42□□□□□ -2.18
SGD1YLR336C COS3P0CX13 379 aa1.42□□□□□ -2.18
SGD1YLR336C RPL4AP10664 362 aaKnown RBP1.42□□□□□ -2.18
SGD1YLR336C VPS1P21576 704 aaKnown RBP1.42□□□□□ -2.18
SGD1YLR336C ERG2P32352 222 aa1.42□□□□□ -2.18
SGD1YLR336C CSG2P35206 410 aa1.42□□□□□ -2.18
SGD1YLR336C YHL049CP38722 271 aa1.42□□□□□ -2.18
SGD1YLR336C OST3P48439 350 aa1.42□□□□□ -2.18
SGD1YLR336C RPL4BP49626 362 aaKnown RBP1.42□□□□□ -2.18
SGD1YLR336C MIG2P53035 382 aa1.42□□□□□ -2.18
SGD1YLR336C MAL13P53338 473 aa1.42□□□□□ -2.18
SGD1YLR336C YOL019WQ08157 551 aa1.42□□□□□ -2.18
SGD1YLR336C TDH2P00358 332 aaKnown RBP1.42□□□□□ -2.18
SGD1YLR336C HIS1P00498 297 aaKnown RBP1.42□□□□□ -2.18
SGD1YLR336C MSF1P08425 469 aa1.42□□□□□ -2.18
SGD1YLR336C MET2P08465 486 aa1.42□□□□□ -2.18
SGD1YLR336C CAM1P29547 415 aaKnown RBP1.42□□□□□ -2.18
SGD1YLR336C SDH4P37298 181 aa1.42□□□□□ -2.18
SGD1YLR336C RPE1P46969 238 aa1.42□□□□□ -2.18
SGD1YLR336C YJL144WP47009 104 aa1.42□□□□□ -2.18
SGD1YLR336C ALG9P53868 555 aaKnown RBP1.42□□□□□ -2.18
SGD1YLR336C CTS2Q06350 511 aa1.42□□□□□ -2.18
SGD1YLR336C HRT1Q08273 121 aa1.42□□□□□ -2.18
SGD1YLR336C SME1Q12330 94 aaPredicted RBP1.42□□□□□ -2.18
SGD1YLR336C ALK2P32789 676 aaPredicted RBP1.41□□□□□ -2.18
SGD1YLR336C YUH1P35127 236 aa1.41□□□□□ -2.18
SGD1YLR336C HEK2P38199 381 aaKnown RBP RIP-Chip data1.41□□□□□ -2.18 RIP-Chip
SGD1YLR336C SPL2P38839 148 aa1.41□□□□□ -2.18
SGD1YLR336C SUR2P38992 349 aa1.41□□□□□ -2.18
SGD1YLR336C DDI1P40087 428 aa1.41□□□□□ -2.18
SGD1YLR336C HSH155P49955 971 aaKnown RBP1.41□□□□□ -2.18
SGD1YLR336C ATC1Q04005 294 aa1.41□□□□□ -2.18
SGD1YLR336C YOL107WQ12239 342 aa1.41□□□□□ -2.18
SGD1YLR336C MRX4Q12467 430 aa1.41□□□□□ -2.18
SGD1YLR336C KRE1P17260 313 aa1.41□□□□□ -2.18
SGD1YLR336C TOM40P23644 387 aaKnown RBP1.41□□□□□ -2.18
SGD1YLR336C PIR5P46999 287 aa1.41□□□□□ -2.18
SGD1YLR336C ALG11P53954 548 aaKnown RBP1.41□□□□□ -2.18
SGD1YLR336C TIM22Q12328 207 aa1.41□□□□□ -2.18
SGD1YLR336C STH1P32597 1359 aa1.41□□□□□ -2.18
SGD1YLR336C HIS3P06633 220 aa1.4□□□□□ -2.18
SGD1YLR336C ZWF1P11412 505 aaKnown RBP1.4□□□□□ -2.18
SGD1YLR336C RRT12P25381 491 aa1.4□□□□□ -2.18
SGD1YLR336C CWP1P28319 239 aa1.4□□□□□ -2.18
SGD1YLR336C EHD3P28817 500 aa1.4□□□□□ -2.18
SGD1YLR336C QRI5P32344 111 aa1.4□□□□□ -2.18
SGD1YLR336C YGL088WP53151 121 aa1.4□□□□□ -2.18
SGD1YLR336C TIM21P53220 239 aa1.4□□□□□ -2.18
SGD1YLR336C EBS1Q03466 884 aaKnown RBP1.4□□□□□ -2.18
SGD1YLR336C FCF1Q05498 189 aaPredicted RBP1.4□□□□□ -2.18
SGD1YLR336C PLB3Q08108 686 aa1.4□□□□□ -2.18
SGD1YLR336C RSR1P13856 272 aa1.4□□□□□ -2.19
SGD1YLR336C MIG1P27705 504 aa1.4□□□□□ -2.19
SGD1YLR336C BIG1P38813 335 aa1.4□□□□□ -2.19
SGD1YLR336C SHC1P39000 512 aa1.4□□□□□ -2.19
SGD1YLR336C YJR012CP47087 207 aa1.4□□□□□ -2.19
SGD1YLR336C RSM27P53305 110 aa1.4□□□□□ -2.19
Retrieved 100 of 5,963 RNA–protein pairs in 33.8 ms