RNA–Protein interactions for RNA: YKL197C

PEX1, Transcript of AAA-peroxin, yeast

Gene PEX1, Length 3,132 nt, Biotype protein coding, Subcellular localisation Peroxisome .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PEX1	YKL197C	YPL108W	Q02872	168 aa	Predicted RBP	3.15	□□□□□ -1.91
PEX1	YKL197C	SEC13	Q04491	297 aa	Known RBP	3.15	□□□□□ -1.91
PEX1	YKL197C	YMR253C	Q04835	414 aa		3.15	□□□□□ -1.91
PEX1	YKL197C	AIM6	Q07716	390 aa		3.15	□□□□□ -1.91
PEX1	YKL197C	DCI1	Q08558	271 aa		3.15	□□□□□ -1.91
PEX1	YKL197C	VTS1	Q08831	523 aa	Known RBP RIP-Chip data	3.15	□□□□□ -1.91	not detected
PEX1	YKL197C	NBP2	Q12163	236 aa		3.15	□□□□□ -1.91
PEX1	YKL197C	DCP1	Q12517	231 aa	Predicted RBP	3.15	□□□□□ -1.91
PEX1	YKL197C	YIR021W-A	Q3E739	70 aa		3.15	□□□□□ -1.91
PEX1	YKL197C	RPS21B	Q3E754	87 aa	Known RBP	3.15	□□□□□ -1.91
PEX1	YKL197C	CYC7	P00045	113 aa		3.14	□□□□□ -1.91
PEX1	YKL197C	COR1	P07256	457 aa		3.14	□□□□□ -1.91
PEX1	YKL197C	YBR121C-A	P0C5L4	52 aa		3.14	□□□□□ -1.91
PEX1	YKL197C	ATR1	P13090	542 aa		3.14	□□□□□ -1.91
PEX1	YKL197C	FUN14	P18411	198 aa		3.14	□□□□□ -1.91
PEX1	YKL197C	SUA7	P29055	345 aa	Predicted RBP	3.14	□□□□□ -1.91
PEX1	YKL197C	REC104	P33323	182 aa		3.14	□□□□□ -1.91
PEX1	YKL197C	SHE2	P36068	246 aa	Known RBP RIP-Chip data	3.14	□□□□□ -1.91	not detected
PEX1	YKL197C	ERV15	P38312	142 aa		3.14	□□□□□ -1.91
PEX1	YKL197C	ARN1	P38731	627 aa		3.14	□□□□□ -1.91
PEX1	YKL197C	YHR127W	P38833	243 aa	Known RBP	3.14	□□□□□ -1.91
PEX1	YKL197C	EXO1	P39875	702 aa		3.14	□□□□□ -1.91
PEX1	YKL197C	SNU13	P39990	126 aa	Known RBP	3.14	□□□□□ -1.91
PEX1	YKL197C	RRG9	P40156	214 aa		3.14	□□□□□ -1.91
PEX1	YKL197C	PSF2	P40359	213 aa		3.14	□□□□□ -1.91
PEX1	YKL197C	PAN6	P40459	309 aa		3.14	□□□□□ -1.91
PEX1	YKL197C	MOB1	P40484	314 aa		3.14	□□□□□ -1.91
PEX1	YKL197C	COS10	P52924	374 aa		3.14	□□□□□ -1.91
PEX1	YKL197C	ROG1	P53118	685 aa		3.14	□□□□□ -1.91
PEX1	YKL197C	RCR2	Q03446	210 aa	Known RBP	3.14	□□□□□ -1.91
PEX1	YKL197C	GAL83	Q04739	417 aa		3.14	□□□□□ -1.91
PEX1	YKL197C	ADH6	Q04894	360 aa	Known RBP	3.14	□□□□□ -1.91
PEX1	YKL197C	BSP1	Q06604	576 aa		3.14	□□□□□ -1.91
PEX1	YKL197C	GPB1	Q08886	897 aa		3.14	□□□□□ -1.91
PEX1	YKL197C	YPR027C	Q12079	277 aa		3.14	□□□□□ -1.91
PEX1	YKL197C	ERP3	Q12403	225 aa		3.14	□□□□□ -1.91
PEX1	YKL197C	VAR1	P02381	398 aa		3.14	□□□□□ -1.91
PEX1	YKL197C	ILV5	P06168	395 aa	Known RBP	3.14	□□□□□ -1.91
PEX1	YKL197C	SEC53	P07283	254 aa	Known RBP	3.14	□□□□□ -1.91
PEX1	YKL197C	SPS2	P08459	502 aa		3.14	□□□□□ -1.91
PEX1	YKL197C	RPB5	P20434	215 aa		3.14	□□□□□ -1.91
PEX1	YKL197C	SAT4	P25333	603 aa	Known RBP	3.14	□□□□□ -1.91
PEX1	YKL197C	TRR1	P29509	319 aa	Known RBP	3.14	□□□□□ -1.91
PEX1	YKL197C	YKL075C	P36083	450 aa		3.14	□□□□□ -1.91
PEX1	YKL197C	ELO1	P39540	310 aa		3.14	□□□□□ -1.91
PEX1	YKL197C	ERJ5	P43613	295 aa	Predicted RBP	3.14	□□□□□ -1.91
PEX1	YKL197C	TAX4	P47030	604 aa		3.14	□□□□□ -1.91
PEX1	YKL197C	IKS1	P47042	667 aa		3.14	□□□□□ -1.91
PEX1	YKL197C	MRPS35	P53292	345 aa		3.14	□□□□□ -1.91
PEX1	YKL197C	SLM2	P53955	656 aa		3.14	□□□□□ -1.91
PEX1	YKL197C	ASI3	P53983	676 aa		3.14	□□□□□ -1.91
PEX1	YKL197C	MRX8	Q05473	314 aa		3.14	□□□□□ -1.91
PEX1	YKL197C	IPK1	Q06667	281 aa		3.14	□□□□□ -1.91
PEX1	YKL197C	ENT4	Q07872	247 aa		3.14	□□□□□ -1.91
PEX1	YKL197C	BTS1	Q12051	335 aa		3.14	□□□□□ -1.91
PEX1	YKL197C	UPC2	Q12151	913 aa		3.14	□□□□□ -1.91
PEX1	YKL197C	FOL3	Q12676	427 aa	Predicted RBP	3.14	□□□□□ -1.91
PEX1	YKL197C	TPK2	P06245	380 aa		3.13	□□□□□ -1.91
PEX1	YKL197C	BAR1	P12630	587 aa		3.13	□□□□□ -1.91
PEX1	YKL197C	GCY1	P14065	312 aa	Known RBP RIP-Chip data	3.13	□□□□□ -1.91	not detected
PEX1	YKL197C	OCH1	P31755	480 aa		3.13	□□□□□ -1.91
PEX1	YKL197C	MRP20	P32387	263 aa		3.13	□□□□□ -1.91
PEX1	YKL197C	FRE1	P32791	686 aa		3.13	□□□□□ -1.91
PEX1	YKL197C	TOD6	P34219	525 aa		3.13	□□□□□ -1.91
PEX1	YKL197C	NNK1	P36003	928 aa		3.13	□□□□□ -1.91
PEX1	YKL197C	ECM21	P38167	1117 aa	Known RBP	3.13	□□□□□ -1.91
PEX1	YKL197C	CHL4	P38907	458 aa		3.13	□□□□□ -1.91
PEX1	YKL197C	FMP52	P40008	231 aa		3.13	□□□□□ -1.91
PEX1	YKL197C	PFK26	P40433	827 aa	Known RBP	3.13	□□□□□ -1.91
PEX1	YKL197C	ARO8	P53090	500 aa	Known RBP	3.13	□□□□□ -1.91
PEX1	YKL197C	MKC7	P53379	596 aa		3.13	□□□□□ -1.91
PEX1	YKL197C	IZH1	Q03419	316 aa		3.13	□□□□□ -1.91
PEX1	YKL197C	GOT1	Q03554	138 aa		3.13	□□□□□ -1.91
PEX1	YKL197C	IRC13	Q08630	104 aa		3.13	□□□□□ -1.91
PEX1	YKL197C	SPE4	Q12455	300 aa		3.13	□□□□□ -1.91
PEX1	YKL197C	RPS28B	P0C0X0	67 aa	Known RBP	3.13	□□□□□ -1.91
PEX1	YKL197C	CTA1	P15202	515 aa		3.13	□□□□□ -1.91
PEX1	YKL197C	PDA1	P16387	420 aa	Known RBP	3.13	□□□□□ -1.91
PEX1	YKL197C	SNF5	P18480	905 aa		3.13	□□□□□ -1.91
PEX1	YKL197C	EXO70	P19658	623 aa		3.13	□□□□□ -1.91
PEX1	YKL197C	YMR31	P19955	123 aa		3.13	□□□□□ -1.91
PEX1	YKL197C	SEC22	P22214	214 aa		3.13	□□□□□ -1.91
PEX1	YKL197C	EMP70	P32802	667 aa		3.13	□□□□□ -1.91
PEX1	YKL197C	PDX3	P38075	228 aa	Known RBP	3.13	□□□□□ -1.91
PEX1	YKL197C	EHT1	P38295	451 aa		3.13	□□□□□ -1.91
PEX1	YKL197C	UME6	P39001	836 aa		3.13	□□□□□ -1.91
PEX1	YKL197C	HPA3	P39979	161 aa		3.13	□□□□□ -1.91
PEX1	YKL197C	TAH11	P47112	604 aa		3.13	□□□□□ -1.91
PEX1	YKL197C	UBC7	Q02159	165 aa		3.13	□□□□□ -1.91
PEX1	YKL197C	DIG2	Q03373	323 aa	Known RBP	3.13	□□□□□ -1.91
PEX1	YKL197C	TMA23	Q03525	211 aa		3.13	□□□□□ -1.91
PEX1	YKL197C	UPS3	Q04006	179 aa		3.13	□□□□□ -1.91
PEX1	YKL197C	SIZ1	Q04195	904 aa		3.13	□□□□□ -1.91
PEX1	YKL197C	YMR315W	Q04869	349 aa	Known RBP	3.13	□□□□□ -1.91
PEX1	YKL197C	YMR320W	Q04897	101 aa		3.13	□□□□□ -1.91
PEX1	YKL197C	BNA5	Q05979	453 aa		3.13	□□□□□ -1.91
PEX1	YKL197C	YFH1	Q07540	174 aa		3.13	□□□□□ -1.91
PEX1	YKL197C	RDI1	Q12434	202 aa		3.13	□□□□□ -1.91
PEX1	YKL197C	YLR099W-A	Q3E798	87 aa		3.13	□□□□□ -1.91
PEX1	YKL197C	RPS28A	Q3E7X9	67 aa	Predicted RBP	3.13	□□□□□ -1.91

Retrieved 100 of 5,963 RNA–protein pairs in 73.3 ms