RNA–Protein interactions for RNA: YIR017C

MET28, Transcript of bZIP transcriptional activator in the Cbf1p-Met4p-Met28p complex, yeastyeast

Gene MET28, Length 564 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MET28YIR017C FOL3Q12676 427 aaPredicted RBP8.55□□□□□ -1.04
MET28YIR017C QCR7P00128 127 aa8.54□□□□□ -1.04
MET28YIR017C RPL35AP0CX84 120 aaKnown RBP8.54□□□□□ -1.04
MET28YIR017C RPL35BP0CX85 120 aaKnown RBP8.54□□□□□ -1.04
MET28YIR017C NAM2P11325 894 aa8.54□□□□□ -1.04
MET28YIR017C PAU2P32612 120 aa8.54□□□□□ -1.04
MET28YIR017C PPG1P32838 368 aa8.54□□□□□ -1.04
MET28YIR017C TIF11P38912 153 aaKnown RBP8.54□□□□□ -1.04
MET28YIR017C SLS1P42900 643 aa8.54□□□□□ -1.04
MET28YIR017C YGL204CP53089 101 aa8.54□□□□□ -1.04
MET28YIR017C MKC7P53379 596 aa8.54□□□□□ -1.04
MET28YIR017C RPL6AQ02326 176 aaKnown RBP8.54□□□□□ -1.04
MET28YIR017C TDA1Q03533 586 aa8.54□□□□□ -1.04
MET28YIR017C MCT1Q12283 360 aa8.54□□□□□ -1.04
MET28YIR017C DCP1Q12517 231 aaPredicted RBP8.54□□□□□ -1.04
MET28YIR017C BLM10P43583 2143 aa8.53□□□□□ -1.04
MET28YIR017C GCN4P03069 281 aa8.53□□□□□ -1.04
MET28YIR017C FRM2P37261 193 aa8.53□□□□□ -1.04
MET28YIR017C SEN34P39707 275 aa8.53□□□□□ -1.04
MET28YIR017C DLS1P40366 167 aa8.53□□□□□ -1.04
MET28YIR017C PAM16P42949 149 aa8.53□□□□□ -1.04
MET28YIR017C YJL055WP47044 245 aa8.53□□□□□ -1.04
MET28YIR017C SLI1P53304 468 aa8.53□□□□□ -1.04
MET28YIR017C CPR8P53728 308 aa8.53□□□□□ -1.04
MET28YIR017C YLR152CP54072 576 aa8.53□□□□□ -1.04
MET28YIR017C RSM23Q01163 450 aa8.53□□□□□ -1.04
MET28YIR017C HLR1Q04429 423 aa8.53□□□□□ -1.04
MET28YIR017C IZH2Q12442 317 aa8.53□□□□□ -1.04
MET28YIR017C NUM1Q00402 2748 aa8.53□□□□□ -1.04
MET28YIR017C SFK1P35735 353 aa8.52□□□□□ -1.05
MET28YIR017C CCZ1P38273 704 aa8.52□□□□□ -1.05
MET28YIR017C PUG1P40100 303 aa8.52□□□□□ -1.05
MET28YIR017C MOB2P43563 287 aa8.52□□□□□ -1.05
MET28YIR017C NIT3P49954 291 aa8.52□□□□□ -1.05
MET28YIR017C IMO32P53219 342 aa8.52□□□□□ -1.05
MET28YIR017C NRK1P53915 240 aa8.52□□□□□ -1.05
MET28YIR017C CIK1Q01649 594 aa8.52□□□□□ -1.05
MET28YIR017C BRE4Q07660 1125 aa8.52□□□□□ -1.05
MET28YIR017C THI72Q08579 599 aa8.52□□□□□ -1.05
MET28YIR017C RCN2Q12044 265 aa8.52□□□□□ -1.05
MET28YIR017C WTM2Q12206 467 aa8.52□□□□□ -1.05
MET28YIR017C SUS1Q6WNK7 96 aa8.52□□□□□ -1.05
MET28YIR017C TRA1P38811 3744 aa8.52□□□□□ -1.05
MET28YIR017C SOD2P00447 233 aa8.51□□□□□ -1.05
MET28YIR017C SBA1P28707 216 aaKnown RBP8.51□□□□□ -1.05
MET28YIR017C KRE6P32486 720 aa8.51□□□□□ -1.05
MET28YIR017C CLG1P35190 452 aa8.51□□□□□ -1.05
MET28YIR017C RCN1P36054 211 aa8.51□□□□□ -1.05
MET28YIR017C SDS24P38314 527 aa8.51□□□□□ -1.05
MET28YIR017C ATG18P43601 500 aa8.51□□□□□ -1.05
MET28YIR017C YJL016WP47072 561 aa8.51□□□□□ -1.05
MET28YIR017C YGR054WP53235 642 aaKnown RBP8.51□□□□□ -1.05
MET28YIR017C TNA1P53322 534 aa8.51□□□□□ -1.05
MET28YIR017C YNL092WP53934 400 aa8.51□□□□□ -1.05
MET28YIR017C PEX30Q06169 523 aa8.51□□□□□ -1.05
MET28YIR017C SOG2Q08817 791 aa8.51□□□□□ -1.05
MET28YIR017C TGS1Q12052 315 aa8.51□□□□□ -1.05
MET28YIR017C COX5BP00425 151 aa8.5□□□□□ -1.05
MET28YIR017C TMA19P35691 167 aaKnown RBP8.5□□□□□ -1.05
MET28YIR017C YBR137WP38276 179 aa8.5□□□□□ -1.05
MET28YIR017C YER084WP40057 128 aa8.5□□□□□ -1.05
MET28YIR017C YJR120WP47157 116 aa8.5□□□□□ -1.05
MET28YIR017C DOC1P53068 250 aa8.5□□□□□ -1.05
MET28YIR017C PXR1P53335 271 aaPredicted RBP8.5□□□□□ -1.05
MET28YIR017C AAH1P53909 347 aa8.5□□□□□ -1.05
MET28YIR017C ACS1Q01574 713 aa8.5□□□□□ -1.05
MET28YIR017C RSM28Q03430 361 aa8.5□□□□□ -1.05
MET28YIR017C HAS1Q03532 505 aaKnown RBP8.5□□□□□ -1.05
MET28YIR017C SSK1Q07084 712 aa8.5□□□□□ -1.05
MET28YIR017C TIR4Q12218 487 aaPredicted RBP8.5□□□□□ -1.05
MET28YIR017C MEC1P38111 2368 aa8.49□□□□□ -1.05
MET28YIR017C ADK1P07170 222 aaKnown RBP8.49□□□□□ -1.05
MET28YIR017C RPL43AP0CX25 92 aaKnown RBP8.49□□□□□ -1.05
MET28YIR017C RPL43BP0CX26 92 aa8.49□□□□□ -1.05
MET28YIR017C PCL1P24867 279 aa8.49□□□□□ -1.05
MET28YIR017C MRT4P33201 236 aaKnown RBP8.49□□□□□ -1.05
MET28YIR017C MRPS5P33759 307 aa8.49□□□□□ -1.05
MET28YIR017C APL3P38065 1025 aa8.49□□□□□ -1.05
MET28YIR017C SSH1P38353 490 aaKnown RBP8.49□□□□□ -1.05
MET28YIR017C TOK1P40310 691 aa8.49□□□□□ -1.05
MET28YIR017C LYS20P48570 428 aaKnown RBP8.49□□□□□ -1.05
MET28YIR017C SIP18P50263 79 aa8.49□□□□□ -1.05
MET28YIR017C NMA1Q06178 401 aaKnown RBP8.49□□□□□ -1.05
MET28YIR017C FRE3Q08905 711 aa8.49□□□□□ -1.05
MET28YIR017C LYS21Q12122 440 aaKnown RBP8.49□□□□□ -1.05
MET28YIR017C MSH5Q12175 901 aa8.49□□□□□ -1.05
MET28YIR017C YBL113CQ7M4S9 792 aa8.49□□□□□ -1.05
MET28YIR017C RPN13O13563 156 aa8.48□□□□□ -1.05
MET28YIR017C TDH3P00359 332 aaKnown RBP RIP-Chip data8.48□□□□□ -1.05not detected
MET28YIR017C HIS3P06633 220 aa8.48□□□□□ -1.05
MET28YIR017C DSF1P0CX08 502 aa8.48□□□□□ -1.05
MET28YIR017C YNR073CP0CX09 502 aa8.48□□□□□ -1.05
MET28YIR017C RPS18AP0CX55 146 aaKnown RBP8.48□□□□□ -1.05
MET28YIR017C RPS18BP0CX56 146 aaPredicted RBP8.48□□□□□ -1.05
MET28YIR017C MATALPHA1P0CY06 175 aa8.48□□□□□ -1.05
MET28YIR017C HMLALPHA1P0CY07 175 aa8.48□□□□□ -1.05
MET28YIR017C ERG4P25340 473 aa8.48□□□□□ -1.05
MET28YIR017C ATG15P25641 520 aa8.48□□□□□ -1.05
MET28YIR017C HOM6P31116 359 aaKnown RBP8.48□□□□□ -1.05
MET28YIR017C MSS11Q03825 758 aa8.48□□□□□ -1.05
Retrieved 100 of 5,963 RNA–protein pairs in 20.1 ms