RNA–Protein interactions for RNA: YHR039C-A

VMA10, Transcript of Subunit G of the V1 peripheral membrane domain of V-ATPase, yeastyeast

Gene VMA10, Length 345 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VMA10YHR039C-A NBP35P52920 328 aa2.36□□□□□ -2.03
VMA10YHR039C-A FLC3P53121 802 aa2.36□□□□□ -2.03
VMA10YHR039C-A COG7P53195 279 aa2.36□□□□□ -2.03
VMA10YHR039C-A CAX4P53223 239 aa2.36□□□□□ -2.03
VMA10YHR039C-A MAL13P53338 473 aa2.36□□□□□ -2.03
VMA10YHR039C-A MRS2Q01926 470 aa2.36□□□□□ -2.03
VMA10YHR039C-A ECM11Q04110 302 aa2.36□□□□□ -2.03
VMA10YHR039C-A ARC18Q05933 178 aaKnown RBP2.36□□□□□ -2.03
VMA10YHR039C-A YDL144CQ07589 356 aa2.36□□□□□ -2.03
VMA10YHR039C-A YDL211CQ12121 372 aa2.36□□□□□ -2.03
VMA10YHR039C-A YOR029WQ12243 111 aa2.36□□□□□ -2.03
VMA10YHR039C-A MRX3P38172 270 aa2.35□□□□□ -2.03
VMA10YHR039C-A YER184CP39961 794 aa2.35□□□□□ -2.03
VMA10YHR039C-A RPL10P41805 221 aaKnown RBP2.35□□□□□ -2.03
VMA10YHR039C-A LIA1P47120 325 aaKnown RBP2.35□□□□□ -2.03
VMA10YHR039C-A NBP1P52919 319 aaPredicted RBP2.35□□□□□ -2.03
VMA10YHR039C-A TIM21P53220 239 aa2.35□□□□□ -2.03
VMA10YHR039C-A FMP41P53889 259 aaKnown RBP2.35□□□□□ -2.03
VMA10YHR039C-A SMD1Q02260 146 aaPredicted RBP2.35□□□□□ -2.03
VMA10YHR039C-A RNH1Q04740 348 aa2.35□□□□□ -2.03
VMA10YHR039C-A MRX8Q05473 314 aa2.35□□□□□ -2.03
VMA10YHR039C-A CPT1P17898 393 aa2.34□□□□□ -2.03
VMA10YHR039C-A PHO80P20052 293 aa2.34□□□□□ -2.03
VMA10YHR039C-A TPS2P31688 896 aaKnown RBP2.34□□□□□ -2.03
VMA10YHR039C-A IME2P32581 645 aa2.34□□□□□ -2.03
VMA10YHR039C-A POP8P38208 133 aa2.34□□□□□ -2.03
VMA10YHR039C-A AVT6P40074 448 aa2.34□□□□□ -2.03
VMA10YHR039C-A FMC1P40491 155 aa2.34□□□□□ -2.03
VMA10YHR039C-A DSN1P40568 576 aa2.34□□□□□ -2.03
VMA10YHR039C-A YJR012CP47087 207 aa2.34□□□□□ -2.03
VMA10YHR039C-A UFD1P53044 361 aa2.34□□□□□ -2.03
VMA10YHR039C-A HST4P53688 370 aa2.34□□□□□ -2.03
VMA10YHR039C-A PET117Q02771 107 aa2.34□□□□□ -2.03
VMA10YHR039C-A PAM18Q07914 168 aa2.34□□□□□ -2.03
VMA10YHR039C-A SGT2Q12118 346 aaKnown RBP2.34□□□□□ -2.03
VMA10YHR039C-A MSH5Q12175 901 aa2.34□□□□□ -2.03
VMA10YHR039C-A AI5_BETAQ9ZZX0 354 aa2.34□□□□□ -2.03
VMA10YHR039C-A SAC3P46674 1301 aa2.34□□□□□ -2.04
VMA10YHR039C-A STH1P32597 1359 aa2.34□□□□□ -2.04
VMA10YHR039C-A YMR316C-AI2HB70 103 aa2.33□□□□□ -2.04
VMA10YHR039C-A RPL4AP10664 362 aaKnown RBP2.33□□□□□ -2.04
VMA10YHR039C-A CUP2P15315 225 aa2.33□□□□□ -2.04
VMA10YHR039C-A CDC42P19073 191 aa2.33□□□□□ -2.04
VMA10YHR039C-A OSM1P21375 501 aaKnown RBP2.33□□□□□ -2.04
VMA10YHR039C-A RAD51P25454 400 aa2.33□□□□□ -2.04
VMA10YHR039C-A QRI5P32344 111 aa2.33□□□□□ -2.04
VMA10YHR039C-A KRE6P32486 720 aa2.33□□□□□ -2.04
VMA10YHR039C-A YHL044WP38727 235 aa2.33□□□□□ -2.04
VMA10YHR039C-A TRR2P38816 342 aa2.33□□□□□ -2.04
VMA10YHR039C-A SMB1P40018 196 aaKnown RBP2.33□□□□□ -2.04
VMA10YHR039C-A SYS1P41544 203 aa2.33□□□□□ -2.04
VMA10YHR039C-A GLG2P47011 380 aa2.33□□□□□ -2.04
VMA10YHR039C-A RPL4BP49626 362 aaKnown RBP2.33□□□□□ -2.04
VMA10YHR039C-A OSH6Q02201 448 aa2.33□□□□□ -2.04
VMA10YHR039C-A YPL264CQ08980 353 aa2.33□□□□□ -2.04
VMA10YHR039C-A YDL012CQ12489 107 aa2.33□□□□□ -2.04
VMA10YHR039C-A PRE7P23724 241 aaKnown RBP2.32□□□□□ -2.04
VMA10YHR039C-A EHD3P28817 500 aa2.32□□□□□ -2.04
VMA10YHR039C-A CAM1P29547 415 aaKnown RBP2.32□□□□□ -2.04
VMA10YHR039C-A CAT2P32796 670 aaKnown RBP2.32□□□□□ -2.04
VMA10YHR039C-A YNL095CP53932 642 aa2.32□□□□□ -2.04
VMA10YHR039C-A EBS1Q03466 884 aaKnown RBP2.32□□□□□ -2.04
VMA10YHR039C-A YPR172WQ06608 200 aa2.32□□□□□ -2.04
VMA10YHR039C-A CSM4Q08955 156 aa2.32□□□□□ -2.04
VMA10YHR039C-A ATG5Q12380 294 aa2.32□□□□□ -2.04
VMA10YHR039C-A SNF8Q12483 233 aa2.32□□□□□ -2.04
VMA10YHR039C-A COS2P0CX12 379 aa2.31□□□□□ -2.04
VMA10YHR039C-A COS3P0CX13 379 aa2.31□□□□□ -2.04
VMA10YHR039C-A VPS3P23643 1011 aa2.31□□□□□ -2.04
VMA10YHR039C-A YCR016WP25617 290 aaKnown RBP2.31□□□□□ -2.04
VMA10YHR039C-A HOM6P31116 359 aaKnown RBP2.31□□□□□ -2.04
VMA10YHR039C-A ERG2P32352 222 aa2.31□□□□□ -2.04
VMA10YHR039C-A HMT1P38074 348 aa2.31□□□□□ -2.04
VMA10YHR039C-A YBL081WP38180 368 aaKnown RBP2.31□□□□□ -2.04
VMA10YHR039C-A MED8P38304 223 aa2.31□□□□□ -2.04
VMA10YHR039C-A SLX1P38324 304 aa2.31□□□□□ -2.04
VMA10YHR039C-A YHL049CP38722 271 aa2.31□□□□□ -2.04
VMA10YHR039C-A YHI9P38765 294 aa2.31□□□□□ -2.04
VMA10YHR039C-A YER085CP40058 173 aa2.31□□□□□ -2.04
VMA10YHR039C-A COS4P43542 379 aa2.31□□□□□ -2.04
VMA10YHR039C-A SWT21P53873 357 aaPredicted RBP2.31□□□□□ -2.04
VMA10YHR039C-A KRE28Q04431 385 aa2.31□□□□□ -2.04
VMA10YHR039C-A YLR283WQ05867 314 aa2.31□□□□□ -2.04
VMA10YHR039C-A RNA15P25299 296 aaPredicted RBP2.3□□□□□ -2.04
VMA10YHR039C-A RPS5P26783 225 aaKnown RBP2.3□□□□□ -2.04
VMA10YHR039C-A HEK2P38199 381 aaKnown RBP RIP-Chip data2.3□□□□□ -2.04not detected
VMA10YHR039C-A PHO89P38361 574 aa2.3□□□□□ -2.04
VMA10YHR039C-A HOC1P47124 396 aa2.3□□□□□ -2.04
VMA10YHR039C-A HSH155P49955 971 aaKnown RBP2.3□□□□□ -2.04
VMA10YHR039C-A MRPL50P53724 139 aa2.3□□□□□ -2.04
VMA10YHR039C-A ZRG17P53735 605 aa2.3□□□□□ -2.04
VMA10YHR039C-A YDR209CQ03480 137 aa2.3□□□□□ -2.04
VMA10YHR039C-A NNT1Q05874 261 aa2.3□□□□□ -2.04
VMA10YHR039C-A RUD3Q12234 484 aaKnown RBP2.3□□□□□ -2.04
VMA10YHR039C-A YPL119C-AQ3E751 87 aa2.3□□□□□ -2.04
VMA10YHR039C-A CFT1Q06632 1357 aaKnown RBP2.3□□□□□ -2.04
VMA10YHR039C-A TDH2P00358 332 aaKnown RBP2.29□□□□□ -2.04
VMA10YHR039C-A RPO26P20435 155 aa2.29□□□□□ -2.04
VMA10YHR039C-A JEN1P36035 616 aa2.29□□□□□ -2.04
VMA10YHR039C-A LDB7P38210 180 aa2.29□□□□□ -2.04
Retrieved 100 of 5,963 RNA–protein pairs in 39.3 ms