RNA–Protein interactions for RNA: YGR136W

LSB1, Transcript of Negative regulator of actin nucleation-promoting factor activity, yeastyeast

Gene LSB1, Length 726 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LSB1YGR136W YNL181WP53878 407 aa3.82□□□□□ -1.8
LSB1YGR136W ARL3Q02804 198 aa3.82□□□□□ -1.8
LSB1YGR136W RIM13Q03792 727 aa3.82□□□□□ -1.8
LSB1YGR136W PLM2Q04383 521 aa3.82□□□□□ -1.8
LSB1YGR136W NEJ1Q06148 342 aa3.82□□□□□ -1.8
LSB1YGR136W SWA2Q06677 668 aa3.82□□□□□ -1.8
LSB1YGR136W GSH2Q08220 491 aa3.82□□□□□ -1.8
LSB1YGR136W BSC6Q08280 497 aa3.82□□□□□ -1.8
LSB1YGR136W YPR063CQ12160 140 aa3.82□□□□□ -1.8
LSB1YGR136W RPL7BQ12213 244 aaKnown RBP3.82□□□□□ -1.8
LSB1YGR136W YPR064WQ12492 139 aa3.82□□□□□ -1.8
LSB1YGR136W YLR111WQ12528 110 aa3.82□□□□□ -1.8
LSB1YGR136W YJR112W-AQ3E743 109 aa3.82□□□□□ -1.8
LSB1YGR136W YOR019WQ99248 730 aa3.82□□□□□ -1.8
LSB1YGR136W SLH1P53327 1967 aaKnown RBP3.82□□□□□ -1.8
LSB1YGR136W GCN1P33892 2672 aaKnown RBP3.81□□□□□ -1.8
LSB1YGR136W COX1P00401 534 aa3.81□□□□□ -1.8
LSB1YGR136W GAL7P08431 366 aa3.81□□□□□ -1.8
LSB1YGR136W PET54P10834 293 aa3.81□□□□□ -1.8
LSB1YGR136W BAR1P12630 587 aa3.81□□□□□ -1.8
LSB1YGR136W CBS1P14066 229 aa3.81□□□□□ -1.8
LSB1YGR136W TFS1P14306 219 aa3.81□□□□□ -1.8
LSB1YGR136W ARO3P14843 370 aaKnown RBP3.81□□□□□ -1.8
LSB1YGR136W DAL82P21705 255 aa3.81□□□□□ -1.8
LSB1YGR136W IDP1P21954 428 aaKnown RBP3.81□□□□□ -1.8
LSB1YGR136W ADH7P25377 361 aa3.81□□□□□ -1.8
LSB1YGR136W KRR1P25586 316 aaPredicted RBP3.81□□□□□ -1.8
LSB1YGR136W BUB3P26449 341 aa3.81□□□□□ -1.8
LSB1YGR136W YIM1P28625 365 aa3.81□□□□□ -1.8
LSB1YGR136W ERG1P32476 496 aaKnown RBP3.81□□□□□ -1.8
LSB1YGR136W MKK1P32490 508 aa3.81□□□□□ -1.8
LSB1YGR136W LHP1P33399 275 aaKnown RBP3.81□□□□□ -1.8
LSB1YGR136W SOF1P33750 489 aaKnown RBP3.81□□□□□ -1.8
LSB1YGR136W AUR1P36107 401 aaPredicted RBP3.81□□□□□ -1.8
LSB1YGR136W RTC3P38804 111 aaPredicted RBP3.81□□□□□ -1.8
LSB1YGR136W FAU1P40099 211 aa3.81□□□□□ -1.8
LSB1YGR136W CAK1P43568 368 aaPredicted RBP3.81□□□□□ -1.8
LSB1YGR136W YJL016WP47072 561 aa3.81□□□□□ -1.8
LSB1YGR136W ECM27P47144 725 aa3.81□□□□□ -1.8
LSB1YGR136W STE24P47154 453 aa3.81□□□□□ -1.8
LSB1YGR136W RPS12P48589 143 aaKnown RBP3.81□□□□□ -1.8
LSB1YGR136W PMT5P52867 743 aa3.81□□□□□ -1.8
LSB1YGR136W MRH4P53166 561 aa3.81□□□□□ -1.8
LSB1YGR136W POP6P53218 158 aa3.81□□□□□ -1.8
LSB1YGR136W YGR067CP53243 804 aa3.81□□□□□ -1.8
LSB1YGR136W YGR168CP53293 376 aa3.81□□□□□ -1.8
LSB1YGR136W YMR310CQ04867 317 aaPredicted RBP3.81□□□□□ -1.8
LSB1YGR136W YLR283WQ05867 314 aa3.81□□□□□ -1.8
LSB1YGR136W UTP21Q06078 939 aaPredicted RBP3.81□□□□□ -1.8
LSB1YGR136W BOP2Q06150 570 aa3.81□□□□□ -1.8
LSB1YGR136W MHR1Q06630 226 aa3.81□□□□□ -1.8
LSB1YGR136W YPD1Q07688 167 aa3.81□□□□□ -1.8
LSB1YGR136W YLR030WQ07967 263 aa3.81□□□□□ -1.8
LSB1YGR136W FMP40Q08968 688 aaPredicted RBP3.81□□□□□ -1.8
LSB1YGR136W LEU9Q12166 604 aaKnown RBP3.81□□□□□ -1.8
LSB1YGR136W YLR126CQ12288 251 aa3.81□□□□□ -1.8
LSB1YGR136W PST2Q12335 198 aaKnown RBP3.81□□□□□ -1.8
LSB1YGR136W HMS1Q12398 434 aa3.81□□□□□ -1.8
LSB1YGR136W YIL046W-AQ3E7Z4 54 aa3.81□□□□□ -1.8
LSB1YGR136W CYR1P08678 2026 aaKnown RBP3.81□□□□□ -1.8
LSB1YGR136W REP2P03872 296 aa3.8□□□□□ -1.8
LSB1YGR136W RPL25P04456 142 aaKnown RBP3.8□□□□□ -1.8
LSB1YGR136W PET9P18239 318 aaKnown RBP3.8□□□□□ -1.8
LSB1YGR136W VMA16P23968 213 aa3.8□□□□□ -1.8
LSB1YGR136W BUD5P25300 642 aaPredicted RBP3.8□□□□□ -1.8
LSB1YGR136W IMG1P25626 169 aa3.8□□□□□ -1.8
LSB1YGR136W IDH1P28834 360 aaKnown RBP RIP-Chip data3.8□□□□□ -1.8not detected
LSB1YGR136W ERG3P32353 365 aa3.8□□□□□ -1.8
LSB1YGR136W NDC1P32500 655 aa3.8□□□□□ -1.8
LSB1YGR136W SUI1P32911 108 aaKnown RBP3.8□□□□□ -1.8
LSB1YGR136W ZRT3P34240 503 aa3.8□□□□□ -1.8
LSB1YGR136W RMD6P39975 231 aa3.8□□□□□ -1.8
LSB1YGR136W RRG9P40156 214 aa3.8□□□□□ -1.8
LSB1YGR136W SEC24P40482 926 aaKnown RBP3.8□□□□□ -1.8
LSB1YGR136W PKP1P40530 394 aa3.8□□□□□ -1.8
LSB1YGR136W MET28P40573 187 aa3.8□□□□□ -1.8
LSB1YGR136W IBA57P47158 497 aa3.8□□□□□ -1.8
LSB1YGR136W YJR141WP47172 347 aaPredicted RBP3.8□□□□□ -1.8
LSB1YGR136W HXT11P54862 567 aa3.8□□□□□ -1.8
LSB1YGR136W RHO4Q00246 291 aa3.8□□□□□ -1.8
LSB1YGR136W MRPS16Q02608 121 aa3.8□□□□□ -1.8
LSB1YGR136W MSC1Q03104 513 aa3.8□□□□□ -1.8
LSB1YGR136W YMD8Q03697 442 aa3.8□□□□□ -1.8
LSB1YGR136W YLR345WQ06137 509 aa3.8□□□□□ -1.8
LSB1YGR136W YLR446WQ06204 433 aa3.8□□□□□ -1.8
LSB1YGR136W YPR091CQ06833 770 aa3.8□□□□□ -1.8
LSB1YGR136W YGK3Q12222 375 aaPredicted RBP3.8□□□□□ -1.8
LSB1YGR136W RBD2Q12270 262 aa3.8□□□□□ -1.8
LSB1YGR136W YCL001W-BQ96VH2 84 aa3.8□□□□□ -1.8
LSB1YGR136W PRP8P33334 2413 aaKnown RBP3.8□□□□□ -1.8
LSB1YGR136W TDH1P00360 332 aaKnown RBP3.79□□□□□ -1.8
LSB1YGR136W PDX1P16451 410 aa3.79□□□□□ -1.8
LSB1YGR136W RPB5P20434 215 aa3.79□□□□□ -1.8
LSB1YGR136W MGR1P25573 417 aa3.79□□□□□ -1.8
LSB1YGR136W VPS17P32913 551 aa3.79□□□□□ -1.8
LSB1YGR136W PDR3P33200 976 aa3.79□□□□□ -1.8
LSB1YGR136W POP7P38291 140 aa3.79□□□□□ -1.8
LSB1YGR136W MNL1P38888 796 aa3.79□□□□□ -1.8
LSB1YGR136W PCL6P40038 420 aa3.79□□□□□ -1.8
LSB1YGR136W RTT105P40063 208 aa3.79□□□□□ -1.8
Retrieved 100 of 5,963 RNA–protein pairs in 12.6 ms