RNA–Protein interactions for RNA: YGR116W

SPT6, Transcript of Nucleosome remodeling protein, yeastyeast

Gene SPT6, Length 4,356 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPT6YGR116W BET3P36149 193 aa3.38□□□□□ -1.87
SPT6YGR116W MRPL11P36521 249 aaPredicted RBP3.38□□□□□ -1.87
SPT6YGR116W MRPL28P36527 147 aa3.38□□□□□ -1.87
SPT6YGR116W HMT1P38074 348 aa3.38□□□□□ -1.87
SPT6YGR116W RTC3P38804 111 aaPredicted RBP3.38□□□□□ -1.87
SPT6YGR116W GPI16P38875 610 aa3.38□□□□□ -1.87
SPT6YGR116W FAA3P39002 694 aa3.38□□□□□ -1.87
SPT6YGR116W GIP2P40036 548 aa3.38□□□□□ -1.87
SPT6YGR116W RPL17BP46990 184 aaKnown RBP3.38□□□□□ -1.87
SPT6YGR116W YJR120WP47157 116 aa3.38□□□□□ -1.87
SPT6YGR116W LYS5P50113 272 aa3.38□□□□□ -1.87
SPT6YGR116W SRP1Q02821 542 aaKnown RBP3.38□□□□□ -1.87
SPT6YGR116W TMA23Q03525 211 aa3.38□□□□□ -1.87
SPT6YGR116W HLR1Q04429 423 aa3.38□□□□□ -1.87
SPT6YGR116W HIP1P06775 603 aa3.38□□□□□ -1.87
SPT6YGR116W SPS4P09937 338 aa3.38□□□□□ -1.87
SPT6YGR116W STE4P18851 423 aa3.38□□□□□ -1.87
SPT6YGR116W FUN19P28003 413 aaPredicted RBP3.38□□□□□ -1.87
SPT6YGR116W GUT1P32190 709 aa3.38□□□□□ -1.87
SPT6YGR116W YGL185CP53100 379 aa3.38□□□□□ -1.87
SPT6YGR116W YML083CQ04526 418 aa3.38□□□□□ -1.87
SPT6YGR116W NDD1Q08887 554 aa3.38□□□□□ -1.87
SPT6YGR116W MMP1Q12372 583 aa3.38□□□□□ -1.87
SPT6YGR116W LPX1Q12405 387 aaKnown RBP3.38□□□□□ -1.87
SPT6YGR116W TMA17Q12513 150 aa3.38□□□□□ -1.87
SPT6YGR116W ATP5P09457 212 aa3.38□□□□□ -1.87
SPT6YGR116W HVG1P0CE11 249 aa3.38□□□□□ -1.87
SPT6YGR116W HAP4P14064 554 aa3.38□□□□□ -1.87
SPT6YGR116W SNF5P18480 905 aa3.38□□□□□ -1.87
SPT6YGR116W PTP1P25044 335 aa3.38□□□□□ -1.87
SPT6YGR116W FUB1P25659 250 aa3.38□□□□□ -1.87
SPT6YGR116W POP5P28005 173 aa3.38□□□□□ -1.87
SPT6YGR116W DCG1P32460 244 aa3.38□□□□□ -1.87
SPT6YGR116W SNC2P33328 115 aa3.38□□□□□ -1.87
SPT6YGR116W MRPS9P38120 278 aa3.38□□□□□ -1.87
SPT6YGR116W CIN5P40917 295 aa3.38□□□□□ -1.87
SPT6YGR116W POP1P41812 875 aa3.38□□□□□ -1.87
SPT6YGR116W MTM1P53320 366 aa3.38□□□□□ -1.87
SPT6YGR116W RSM23Q01163 450 aa3.38□□□□□ -1.87
SPT6YGR116W RTN1Q04947 295 aaKnown RBP3.38□□□□□ -1.87
SPT6YGR116W YPR109WQ06104 294 aa3.38□□□□□ -1.87
SPT6YGR116W PAA1Q12447 191 aaKnown RBP3.38□□□□□ -1.87
SPT6YGR116W ERG27Q12452 347 aaKnown RBP3.38□□□□□ -1.87
SPT6YGR116W AIM45Q12480 344 aaKnown RBP3.38□□□□□ -1.87
SPT6YGR116W CHO1P08456 276 aa3.37□□□□□ -1.87
SPT6YGR116W HOP09932 586 aa3.37□□□□□ -1.87
SPT6YGR116W RPS21AP0C0V8 87 aaKnown RBP3.37□□□□□ -1.87
SPT6YGR116W ADH7P25377 361 aa3.37□□□□□ -1.87
SPT6YGR116W EHD3P28817 500 aa3.37□□□□□ -1.87
SPT6YGR116W CUE1P38428 203 aa3.37□□□□□ -1.87
SPT6YGR116W YHR097CP38809 366 aaKnown RBP3.37□□□□□ -1.87
SPT6YGR116W SLZ1P40167 298 aa3.37□□□□□ -1.87
SPT6YGR116W NIF3P53081 288 aa3.37□□□□□ -1.87
SPT6YGR116W ELP4Q02884 456 aaKnown RBP3.37□□□□□ -1.87
SPT6YGR116W TPP1Q03796 238 aa3.37□□□□□ -1.87
SPT6YGR116W CAB5Q03941 241 aa3.37□□□□□ -1.87
SPT6YGR116W FDH1Q08911 376 aa3.37□□□□□ -1.87
SPT6YGR116W TY1A-HP0C2I4 478 aaKnown RBP3.37□□□□□ -1.87
SPT6YGR116W SEC62P21825 274 aa3.37□□□□□ -1.87
SPT6YGR116W CPR4P25334 318 aa3.37□□□□□ -1.87
SPT6YGR116W POT1P27796 417 aaKnown RBP RIP-Chip data3.37□□□□□ -1.87not detected
SPT6YGR116W YBR292CP38357 123 aa3.37□□□□□ -1.87
SPT6YGR116W PTC7P38797 343 aa3.37□□□□□ -1.87
SPT6YGR116W GIM4P40005 111 aaKnown RBP3.37□□□□□ -1.87
SPT6YGR116W RPL34BP40525 121 aaKnown RBP3.37□□□□□ -1.87
SPT6YGR116W PFA3P42836 336 aa3.37□□□□□ -1.87
SPT6YGR116W YGL262WP53054 175 aa3.37□□□□□ -1.87
SPT6YGR116W YGL204CP53089 101 aa3.37□□□□□ -1.87
SPT6YGR116W YMR178WQ03219 274 aaKnown RBP3.37□□□□□ -1.87
SPT6YGR116W HNT1Q04344 158 aaKnown RBP3.37□□□□□ -1.87
SPT6YGR116W RSF1Q05043 376 aa3.37□□□□□ -1.87
SPT6YGR116W YLR456WQ06199 204 aa3.37□□□□□ -1.87
SPT6YGR116W AIM6Q07716 390 aa3.37□□□□□ -1.87
SPT6YGR116W REX4Q08237 289 aa3.37□□□□□ -1.87
SPT6YGR116W COX19Q3E731 98 aa3.37□□□□□ -1.87
SPT6YGR116W RPL31AP0C2H8 113 aaKnown RBP3.37□□□□□ -1.87
SPT6YGR116W RPL31BP0C2H9 113 aaKnown RBP3.37□□□□□ -1.87
SPT6YGR116W NRP1P32770 719 aaKnown RBP RIP-Chip data3.37□□□□□ -1.87not detected
SPT6YGR116W MSN4P33749 630 aa3.37□□□□□ -1.87
SPT6YGR116W ECM15P35195 104 aa3.37□□□□□ -1.87
SPT6YGR116W OAR1P35731 278 aa3.37□□□□□ -1.87
SPT6YGR116W VBA2P38358 474 aaKnown RBP3.37□□□□□ -1.87
SPT6YGR116W RRP3P38712 501 aaKnown RBP3.37□□□□□ -1.87
SPT6YGR116W NOP16P40007 231 aaKnown RBP3.37□□□□□ -1.87
SPT6YGR116W BTT1P40314 149 aaPredicted RBP3.37□□□□□ -1.87
SPT6YGR116W APQ12P40532 138 aa3.37□□□□□ -1.87
SPT6YGR116W MOB2P43563 287 aa3.37□□□□□ -1.87
SPT6YGR116W NIT3P49954 291 aa3.37□□□□□ -1.87
SPT6YGR116W UBC9P50623 157 aaPredicted RBP3.37□□□□□ -1.87
SPT6YGR116W AVT4P50944 713 aa3.37□□□□□ -1.87
SPT6YGR116W AVO2Q04749 426 aa3.37□□□□□ -1.87
SPT6YGR116W SNO4Q04902 237 aa3.37□□□□□ -1.87
SPT6YGR116W HEM25Q07534 307 aa3.37□□□□□ -1.87
SPT6YGR116W HSP33Q08914 237 aaKnown RBP3.37□□□□□ -1.87
SPT6YGR116W MMT2Q08970 484 aa3.37□□□□□ -1.87
SPT6YGR116W HSP32Q08992 237 aa3.37□□□□□ -1.87
SPT6YGR116W SRO7Q12038 1033 aa3.37□□□□□ -1.87
SPT6YGR116W YDL085C-AQ3E7B7 68 aaKnown RBP3.37□□□□□ -1.87
SPT6YGR116W PET20Q99373 253 aa3.37□□□□□ -1.87
SPT6YGR116W YMC1P32331 307 aa3.37□□□□□ -1.87
Retrieved 100 of 5,963 RNA–protein pairs in 36 ms