RNA–Protein interactions for RNA: YGL050W

TYW3, Transcript of tRNA methyltransferase required for synthesis of wybutosine, yeast

Gene TYW3, Length 822 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TYW3	YGL050W	FIN1	Q03898	291 aa		4.12	□□□□□ -1.75
TYW3	YGL050W	ARP10	Q04549	284 aa		4.12	□□□□□ -1.75
TYW3	YGL050W	RTC5	Q12108	567 aa	Known RBP	4.12	□□□□□ -1.75
TYW3	YGL050W	YRA1	Q12159	226 aa	Known RBP	4.12	□□□□□ -1.75
TYW3	YGL050W	PCL9	Q12477	304 aa		4.12	□□□□□ -1.75
TYW3	YGL050W	PHO80	P20052	293 aa		4.11	□□□□□ -1.75
TYW3	YGL050W	KRR1	P25586	316 aa	Predicted RBP	4.11	□□□□□ -1.75
TYW3	YGL050W	ATS1	P31386	333 aa		4.11	□□□□□ -1.75
TYW3	YGL050W	OAC1	P32332	324 aa		4.11	□□□□□ -1.75
TYW3	YGL050W	ECM4	P36156	370 aa		4.11	□□□□□ -1.75
TYW3	YGL050W	MED8	P38304	223 aa		4.11	□□□□□ -1.75
TYW3	YGL050W	VBA2	P38358	474 aa	Known RBP	4.11	□□□□□ -1.75
TYW3	YGL050W	RRP4	P38792	359 aa	Known RBP	4.11	□□□□□ -1.75
TYW3	YGL050W	EGD2	P38879	174 aa	Known RBP	4.11	□□□□□ -1.75
TYW3	YGL050W	CHL4	P38907	458 aa		4.11	□□□□□ -1.75
TYW3	YGL050W	MLH1	P38920	769 aa		4.11	□□□□□ -1.75
TYW3	YGL050W	YEL068C	P39977	110 aa		4.11	□□□□□ -1.75
TYW3	YGL050W	XBP1	P40489	647 aa		4.11	□□□□□ -1.75
TYW3	YGL050W	SFH5	P47008	294 aa		4.11	□□□□□ -1.75
TYW3	YGL050W	UBX6	P47049	396 aa		4.11	□□□□□ -1.75
TYW3	YGL050W	MSY1	P48527	492 aa		4.11	□□□□□ -1.75
TYW3	YGL050W	RBL2	P48606	106 aa	Known RBP	4.11	□□□□□ -1.75
TYW3	YGL050W	BRR6	P53062	197 aa		4.11	□□□□□ -1.75
TYW3	YGL050W	YGL235W	P53071	178 aa		4.11	□□□□□ -1.75
TYW3	YGL050W	YGR126W	P53274	230 aa		4.11	□□□□□ -1.75
TYW3	YGL050W	MKC7	P53379	596 aa		4.11	□□□□□ -1.75
TYW3	YGL050W	ASI1	P54074	624 aa		4.11	□□□□□ -1.75
TYW3	YGL050W	TMA20	P89886	181 aa	Predicted RBP	4.11	□□□□□ -1.75
TYW3	YGL050W	YMR315W	Q04869	349 aa	Known RBP	4.11	□□□□□ -1.75
TYW3	YGL050W	HRI1	Q05905	244 aa	Known RBP	4.11	□□□□□ -1.75
TYW3	YGL050W	GAS2	Q06135	555 aa		4.11	□□□□□ -1.75
TYW3	YGL050W	ATG17	Q06410	417 aa		4.11	□□□□□ -1.75
TYW3	YGL050W	YLR352W	Q06479	807 aa		4.11	□□□□□ -1.75
TYW3	YGL050W	NIP7	Q08962	181 aa	Known RBP	4.11	□□□□□ -1.75
TYW3	YGL050W	MED2	Q12124	431 aa		4.11	□□□□□ -1.75
TYW3	YGL050W	NKP1	Q12493	238 aa		4.11	□□□□□ -1.75
TYW3	YGL050W	FLO9	P39712	1322 aa		4.11	□□□□□ -1.75
TYW3	YGL050W	SEC16	P48415	2195 aa	Known RBP	4.1	□□□□□ -1.75
TYW3	YGL050W	CDC36	P06100	191 aa	Predicted RBP	4.1	□□□□□ -1.75
TYW3	YGL050W	PRB1	P09232	635 aa		4.1	□□□□□ -1.75
TYW3	YGL050W	NFT1	P0CE68	1218 aa		4.1	□□□□□ -1.75
TYW3	YGL050W	RPL35A	P0CX84	120 aa	Known RBP	4.1	□□□□□ -1.75
TYW3	YGL050W	RPL35B	P0CX85	120 aa	Known RBP	4.1	□□□□□ -1.75
TYW3	YGL050W	RPB8	P20436	146 aa		4.1	□□□□□ -1.75
TYW3	YGL050W	MDH2	P22133	377 aa		4.1	□□□□□ -1.75
TYW3	YGL050W	STE50	P25344	346 aa		4.1	□□□□□ -1.75
TYW3	YGL050W	YCR100C	P25606	316 aa		4.1	□□□□□ -1.75
TYW3	YGL050W	MDH3	P32419	343 aa	Known RBP RIP-Chip data	4.1	□□□□□ -1.75	not detected
TYW3	YGL050W	TIF3	P34167	436 aa	Known RBP	4.1	□□□□□ -1.75
TYW3	YGL050W	MRPL39	P36533	70 aa		4.1	□□□□□ -1.75
TYW3	YGL050W	RTC2	P38279	296 aa		4.1	□□□□□ -1.75
TYW3	YGL050W	MDM31	P38880	579 aa		4.1	□□□□□ -1.75
TYW3	YGL050W	YNL208W	P40159	199 aa	Known RBP	4.1	□□□□□ -1.75
TYW3	YGL050W	PRE6	P40303	254 aa	Known RBP	4.1	□□□□□ -1.75
TYW3	YGL050W	YIL169C	P40442	995 aa		4.1	□□□□□ -1.75
TYW3	YGL050W	DPB11	P47027	764 aa	Predicted RBP	4.1	□□□□□ -1.75
TYW3	YGL050W	VOA1	P53262	265 aa		4.1	□□□□□ -1.75
TYW3	YGL050W	MPP6	P53725	186 aa	Predicted RBP	4.1	□□□□□ -1.75
TYW3	YGL050W	ACS1	Q01574	713 aa		4.1	□□□□□ -1.75
TYW3	YGL050W	KAP120	Q02932	1032 aa		4.1	□□□□□ -1.75
TYW3	YGL050W	TLG1	Q03322	224 aa		4.1	□□□□□ -1.75
TYW3	YGL050W	SCS7	Q03529	384 aa		4.1	□□□□□ -1.75
TYW3	YGL050W	MRPL1	Q04599	285 aa		4.1	□□□□□ -1.75
TYW3	YGL050W	ELP6	Q04868	273 aa		4.1	□□□□□ -1.75
TYW3	YGL050W	TRI1	Q05024	226 aa		4.1	□□□□□ -1.75
TYW3	YGL050W	CTS2	Q06350	511 aa		4.1	□□□□□ -1.75
TYW3	YGL050W	YPR147C	Q06522	304 aa	Known RBP	4.1	□□□□□ -1.75
TYW3	YGL050W	YDL114W	Q07530	308 aa		4.1	□□□□□ -1.75
TYW3	YGL050W	HRT1	Q08273	121 aa		4.1	□□□□□ -1.75
TYW3	YGL050W	YDL180W	Q12301	547 aa		4.1	□□□□□ -1.75
TYW3	YGL050W	YOR343C	Q12484	108 aa		4.1	□□□□□ -1.75
TYW3	YGL050W	MED11	Q99278	115 aa		4.1	□□□□□ -1.75
TYW3	YGL050W	CTA1	P15202	515 aa		4.09	□□□□□ -1.75
TYW3	YGL050W	URE2	P23202	354 aa	Known RBP	4.09	□□□□□ -1.75
TYW3	YGL050W	RPS5	P26783	225 aa	Known RBP	4.09	□□□□□ -1.75
TYW3	YGL050W	MCM10	P32354	571 aa		4.09	□□□□□ -1.75
TYW3	YGL050W	ALP1	P38971	573 aa		4.09	□□□□□ -1.75
TYW3	YGL050W	BUR6	P40096	142 aa		4.09	□□□□□ -1.75
TYW3	YGL050W	RIO2	P40160	425 aa	Known RBP	4.09	□□□□□ -1.75
TYW3	YGL050W	SLZ1	P40167	298 aa		4.09	□□□□□ -1.75
TYW3	YGL050W	RFC4	P40339	323 aa	Known RBP	4.09	□□□□□ -1.75
TYW3	YGL050W	STB1	P42845	420 aa		4.09	□□□□□ -1.75
TYW3	YGL050W	RRN9	P53437	365 aa		4.09	□□□□□ -1.75
TYW3	YGL050W	YMR087W	Q04299	284 aa		4.09	□□□□□ -1.75
TYW3	YGL050W	YLR345W	Q06137	509 aa		4.09	□□□□□ -1.75
TYW3	YGL050W	NEJ1	Q06148	342 aa		4.09	□□□□□ -1.75
TYW3	YGL050W	SYC1	Q08553	188 aa	Predicted RBP	4.09	□□□□□ -1.75
TYW3	YGL050W	PST2	Q12335	198 aa	Known RBP	4.09	□□□□□ -1.75
TYW3	YGL050W	SET6	Q12529	373 aa		4.09	□□□□□ -1.75
TYW3	YGL050W	RPL43A	P0CX25	92 aa	Known RBP	4.08	□□□□□ -1.76
TYW3	YGL050W	RPL43B	P0CX26	92 aa		4.08	□□□□□ -1.76
TYW3	YGL050W	SCO1	P23833	295 aa		4.08	□□□□□ -1.76
TYW3	YGL050W	CAM1	P29547	415 aa	Known RBP	4.08	□□□□□ -1.76
TYW3	YGL050W	VPH2	P32341	215 aa		4.08	□□□□□ -1.76
TYW3	YGL050W	SUR1	P33300	382 aa		4.08	□□□□□ -1.76
TYW3	YGL050W	PAD1	P33751	242 aa	Known RBP RIP-Chip data	4.08	□□□□□ -1.76	not detected
TYW3	YGL050W	COS9	P36034	407 aa		4.08	□□□□□ -1.76
TYW3	YGL050W	SDS22	P36047	338 aa		4.08	□□□□□ -1.76
TYW3	YGL050W	SRP102	P36057	244 aa	Predicted RBP	4.08	□□□□□ -1.76
TYW3	YGL050W	YBR285W	P38354	144 aa		4.08	□□□□□ -1.76

Retrieved 100 of 5,963 RNA–protein pairs in 17.5 ms