RNA–Protein interactions for RNA: YGL007W

BRP1, Transcript of Dubious ORF located in the upstream region of PMA1, yeastyeast

Gene BRP1, Length 378 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
BRP1YGL007W HIR2P32480 875 aa1.88□□□□□ -2.11
BRP1YGL007W RPN2P32565 945 aaKnown RBP1.88□□□□□ -2.11
BRP1YGL007W TIM12P32830 109 aa1.88□□□□□ -2.11
BRP1YGL007W SUR1P33300 382 aa1.88□□□□□ -2.11
BRP1YGL007W ECM15P35195 104 aa1.88□□□□□ -2.11
BRP1YGL007W SKG1P36169 355 aa1.88□□□□□ -2.11
BRP1YGL007W ECM34P38728 170 aa1.88□□□□□ -2.11
BRP1YGL007W PEX18P38855 283 aa1.88□□□□□ -2.11
BRP1YGL007W SHO1P40073 367 aa1.88□□□□□ -2.11
BRP1YGL007W COG3P40094 801 aa1.88□□□□□ -2.11
BRP1YGL007W PCL7P40186 285 aa1.88□□□□□ -2.11
BRP1YGL007W RFC4P40339 323 aaKnown RBP1.88□□□□□ -2.11
BRP1YGL007W YFL051CP43552 160 aa1.88□□□□□ -2.11
BRP1YGL007W NUP57P48837 541 aa1.88□□□□□ -2.11
BRP1YGL007W YGL235WP53071 178 aa1.88□□□□□ -2.11
BRP1YGL007W YIP5P53108 310 aa1.88□□□□□ -2.11
BRP1YGL007W YGR126WP53274 230 aa1.88□□□□□ -2.11
BRP1YGL007W SYF2P53277 215 aaPredicted RBP1.88□□□□□ -2.11
BRP1YGL007W COS6P53344 381 aa1.88□□□□□ -2.11
BRP1YGL007W MPP6P53725 186 aaPredicted RBP1.88□□□□□ -2.11
BRP1YGL007W SPR6Q01684 191 aa1.88□□□□□ -2.11
BRP1YGL007W SKO1Q02100 647 aa1.88□□□□□ -2.11
BRP1YGL007W YPL039WQ03080 316 aa1.88□□□□□ -2.11
BRP1YGL007W SCS7Q03529 384 aa1.88□□□□□ -2.11
BRP1YGL007W YMR130WQ04223 302 aa1.88□□□□□ -2.11
BRP1YGL007W COX20Q04935 205 aa1.88□□□□□ -2.11
BRP1YGL007W ATG38Q05789 226 aaKnown RBP1.88□□□□□ -2.11
BRP1YGL007W ATG26Q06321 1198 aa1.88□□□□□ -2.11
BRP1YGL007W ARV1Q06541 321 aa1.88□□□□□ -2.11
BRP1YGL007W GPI11Q06636 219 aa1.88□□□□□ -2.11
BRP1YGL007W RAF1Q06891 181 aa1.88□□□□□ -2.11
BRP1YGL007W YDL109CQ12103 647 aa1.88□□□□□ -2.11
BRP1YGL007W YOR214CQ12282 236 aa1.88□□□□□ -2.11
BRP1YGL007W SFM1Q12314 213 aa1.88□□□□□ -2.11
BRP1YGL007W SET6Q12529 373 aa1.88□□□□□ -2.11
BRP1YGL007W FOL3Q12676 427 aaPredicted RBP1.88□□□□□ -2.11
BRP1YGL007W DET1Q99288 334 aaKnown RBP1.88□□□□□ -2.11
BRP1YGL007W YAL064W-BO13512 126 aa1.87□□□□□ -2.11
BRP1YGL007W RAD7P06779 565 aa1.87□□□□□ -2.11
BRP1YGL007W TFS1P14306 219 aa1.87□□□□□ -2.11
BRP1YGL007W RPB8P20436 146 aa1.87□□□□□ -2.11
BRP1YGL007W DBP3P20447 523 aaKnown RBP1.87□□□□□ -2.11
BRP1YGL007W CMK2P22517 447 aa1.87□□□□□ -2.11
BRP1YGL007W FUN19P28003 413 aaPredicted RBP1.87□□□□□ -2.11
BRP1YGL007W ITR2P30606 609 aa1.87□□□□□ -2.11
BRP1YGL007W SAC1P32368 623 aaKnown RBP1.87□□□□□ -2.11
BRP1YGL007W SSE1P32589 693 aaKnown RBP1.87□□□□□ -2.11
BRP1YGL007W TRS65P32893 560 aa1.87□□□□□ -2.11
BRP1YGL007W MSN4P33749 630 aa1.87□□□□□ -2.11
BRP1YGL007W YKL187CP34231 750 aa1.87□□□□□ -2.11
BRP1YGL007W COS9P36034 407 aa1.87□□□□□ -2.11
BRP1YGL007W MRPL39P36533 70 aa1.87□□□□□ -2.11
BRP1YGL007W YBR241CP38142 488 aa1.87□□□□□ -2.11
BRP1YGL007W CHK1P38147 527 aa1.87□□□□□ -2.11
BRP1YGL007W TCM62P38228 572 aaKnown RBP1.87□□□□□ -2.11
BRP1YGL007W NTC20P38302 140 aaPredicted RBP1.87□□□□□ -2.11
BRP1YGL007W WSS1P38838 269 aa1.87□□□□□ -2.11
BRP1YGL007W YHR180WP38868 163 aa1.87□□□□□ -2.11
BRP1YGL007W MLH1P38920 769 aa1.87□□□□□ -2.11
BRP1YGL007W RCY1P39531 840 aa1.87□□□□□ -2.11
BRP1YGL007W GAT2P40209 560 aa1.87□□□□□ -2.11
BRP1YGL007W YMR144WP40214 342 aaKnown RBP1.87□□□□□ -2.11
BRP1YGL007W MAM33P40513 266 aa1.87□□□□□ -2.11
BRP1YGL007W RPS0BP46654 252 aaKnown RBP1.87□□□□□ -2.11
BRP1YGL007W TMA22P47089 198 aaPredicted RBP1.87□□□□□ -2.11
BRP1YGL007W SHE4P51534 789 aa1.87□□□□□ -2.11
BRP1YGL007W GET1P53192 235 aa1.87□□□□□ -2.11
BRP1YGL007W PCP1P53259 346 aa1.87□□□□□ -2.11
BRP1YGL007W GIS2P53849 153 aaKnown RBP RIP-Chip data1.87□□□□□ -2.11not detected
BRP1YGL007W PRP3Q03338 469 aaPredicted RBP1.87□□□□□ -2.11
BRP1YGL007W GRX3Q03835 250 aa1.87□□□□□ -2.11
BRP1YGL007W KRE28Q04431 385 aa1.87□□□□□ -2.11
BRP1YGL007W SPC24Q04477 213 aa1.87□□□□□ -2.11
BRP1YGL007W SEC13Q04491 297 aaKnown RBP1.87□□□□□ -2.11
BRP1YGL007W MRPL1Q04599 285 aa1.87□□□□□ -2.11
BRP1YGL007W YPR127WQ06494 345 aa1.87□□□□□ -2.11
BRP1YGL007W SYO1Q07395 620 aa1.87□□□□□ -2.11
BRP1YGL007W BTS1Q12051 335 aa1.87□□□□□ -2.11
BRP1YGL007W AEP3Q12089 606 aa1.87□□□□□ -2.11
BRP1YGL007W SIA1Q12212 622 aa1.87□□□□□ -2.11
BRP1YGL007W YOR097CQ12274 175 aaPredicted RBP1.87□□□□□ -2.11
BRP1YGL007W YDL199CQ12407 687 aa1.87□□□□□ -2.11
BRP1YGL007W MRX4Q12467 430 aa1.87□□□□□ -2.11
BRP1YGL007W YOR343CQ12484 108 aa1.87□□□□□ -2.11
BRP1YGL007W MHF2Q3E829 80 aa1.87□□□□□ -2.11
BRP1YGL007W MDN1Q12019 4910 aaKnown RBP1.86□□□□□ -2.11
BRP1YGL007W MET2P08465 486 aa1.86□□□□□ -2.11
BRP1YGL007W PET9P18239 318 aaKnown RBP1.86□□□□□ -2.11
BRP1YGL007W ATP10P18496 279 aa1.86□□□□□ -2.11
BRP1YGL007W YPK2P18961 677 aa1.86□□□□□ -2.11
BRP1YGL007W NUP1P20676 1076 aa1.86□□□□□ -2.11
BRP1YGL007W HSP30P25619 332 aa1.86□□□□□ -2.11
BRP1YGL007W SNC1P31109 117 aa1.86□□□□□ -2.11
BRP1YGL007W TFC1P32367 649 aa1.86□□□□□ -2.11
BRP1YGL007W CYS4P32582 507 aaKnown RBP1.86□□□□□ -2.11
BRP1YGL007W RPC34P32910 317 aa1.86□□□□□ -2.11
BRP1YGL007W MRPS5P33759 307 aa1.86□□□□□ -2.11
BRP1YGL007W GPX1P36014 167 aa1.86□□□□□ -2.11
BRP1YGL007W RSM22P36056 628 aa1.86□□□□□ -2.11
BRP1YGL007W MAL32P38158 584 aa1.86□□□□□ -2.11
Retrieved 100 of 5,963 RNA–protein pairs in 19.6 ms