RNA–Protein interactions for RNA: YDR504C

SPG3, Transcript of Protein required for high temperature survival during stationary phase, yeastyeast

Gene SPG3, Length 384 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPG3YDR504C RNA15P25299 296 aaPredicted RBP-0.96□□□□□ -2.56
SPG3YDR504C YER076CP40049 302 aa-0.96□□□□□ -2.56
SPG3YDR504C BTT1P40314 149 aaPredicted RBP-0.96□□□□□ -2.56
SPG3YDR504C MDM34P53083 459 aa-0.96□□□□□ -2.56
SPG3YDR504C ATO3Q12359 275 aa-0.96□□□□□ -2.56
SPG3YDR504C HSP82P02829 709 aaKnown RBP-0.97□□□□□ -2.56
SPG3YDR504C ACB1P31787 87 aa-0.97□□□□□ -2.56
SPG3YDR504C IMP3P32899 183 aaPredicted RBP-0.97□□□□□ -2.56
SPG3YDR504C YPC1P38298 316 aa-0.97□□□□□ -2.56
SPG3YDR504C YNR068CP53754 272 aa-0.97□□□□□ -2.56
SPG3YDR504C SML1Q04964 104 aa-0.97□□□□□ -2.56
SPG3YDR504C INH1P01097 85 aa-0.98□□□□□ -2.57
SPG3YDR504C YLL053CP0CD98 152 aa-0.98□□□□□ -2.57
SPG3YDR504C RNP1P32385 249 aa-0.98□□□□□ -2.57
SPG3YDR504C VPH1P32563 840 aaKnown RBP-0.98□□□□□ -2.57
SPG3YDR504C DBP6P53734 629 aaKnown RBP-0.98□□□□□ -2.57
SPG3YDR504C RGS2Q99188 309 aa-0.98□□□□□ -2.57
SPG3YDR504C SWI3P32591 825 aa-0.99□□□□□ -2.57
SPG3YDR504C PRP39P39682 629 aaKnown RBP-0.99□□□□□ -2.57
SPG3YDR504C SMD3P43321 101 aaKnown RBP-0.99□□□□□ -2.57
SPG3YDR504C NIF3P53081 288 aa-0.99□□□□□ -2.57
SPG3YDR504C YGR016WP53209 190 aa-0.99□□□□□ -2.57
SPG3YDR504C RSM10Q03201 203 aa-0.99□□□□□ -2.57
SPG3YDR504C AEP1P32493 518 aa-1□□□□□ -2.57
SPG3YDR504C PXA2P34230 853 aa-1□□□□□ -2.57
SPG3YDR504C TEM1P38987 245 aa-1□□□□□ -2.57
SPG3YDR504C YKE4P40544 346 aa-1□□□□□ -2.57
SPG3YDR504C MLC1P53141 149 aa-1□□□□□ -2.57
SPG3YDR504C IRC4Q03036 179 aa-1□□□□□ -2.57
SPG3YDR504C OST2P46964 130 aa-1.01□□□□□ -2.57
SPG3YDR504C ASI3P53983 676 aa-1.01□□□□□ -2.57
SPG3YDR504C UTP6Q02354 440 aaKnown RBP-1.01□□□□□ -2.57
SPG3YDR504C ERV15P38312 142 aa-1.02□□□□□ -2.57
SPG3YDR504C YHR035WP38769 630 aa-1.02□□□□□ -2.57
SPG3YDR504C AGE2P40529 298 aa-1.02□□□□□ -2.57
SPG3YDR504C UBC13P52490 153 aa-1.02□□□□□ -2.57
SPG3YDR504C LCL2Q08045 131 aa-1.02□□□□□ -2.57
SPG3YDR504C USB1Q12208 290 aaKnown RBP-1.02□□□□□ -2.57
SPG3YDR504C FAA1P30624 700 aaKnown RBP-1.03□□□□□ -2.57
SPG3YDR504C VMA5P31412 392 aaKnown RBP-1.03□□□□□ -2.57
SPG3YDR504C RVB1Q03940 463 aaKnown RBP-1.03□□□□□ -2.57
SPG3YDR504C YPL162CQ12042 273 aa-1.03□□□□□ -2.57
SPG3YDR504C YHR032W-AP0C5N6 59 aa-1.04□□□□□ -2.58
SPG3YDR504C PBN1P25580 416 aa-1.04□□□□□ -2.58
SPG3YDR504C SVP26P38869 228 aa-1.04□□□□□ -2.58
SPG3YDR504C YGR219WP53307 113 aa-1.04□□□□□ -2.58
SPG3YDR504C FMP41P53889 259 aaKnown RBP-1.04□□□□□ -2.58
SPG3YDR504C SPO24Q3E752 67 aa-1.04□□□□□ -2.58
SPG3YDR504C UBA1P22515 1024 aaKnown RBP-1.05□□□□□ -2.58
SPG3YDR504C OAC1P32332 324 aa-1.05□□□□□ -2.58
SPG3YDR504C HMT1P38074 348 aa-1.05□□□□□ -2.58
SPG3YDR504C RIO2P40160 425 aaKnown RBP-1.05□□□□□ -2.58
SPG3YDR504C AGX1P43567 385 aa-1.05□□□□□ -2.58
SPG3YDR504C SRB7P47822 140 aa-1.05□□□□□ -2.58
SPG3YDR504C MAL13P53338 473 aa-1.05□□□□□ -2.58
SPG3YDR504C COS2P0CX12 379 aa-1.06□□□□□ -2.58
SPG3YDR504C COS3P0CX13 379 aa-1.06□□□□□ -2.58
SPG3YDR504C ZRT1P32804 376 aa-1.06□□□□□ -2.58
SPG3YDR504C UIP5P36137 443 aa-1.06□□□□□ -2.58
SPG3YDR504C ALP1P38971 573 aa-1.06□□□□□ -2.58
SPG3YDR504C SOK1P40317 901 aa-1.06□□□□□ -2.58
SPG3YDR504C YJL028WP47062 111 aa-1.06□□□□□ -2.58
SPG3YDR504C SED1Q01589 338 aa-1.06□□□□□ -2.58
SPG3YDR504C YML018CQ03730 393 aa-1.06□□□□□ -2.58
SPG3YDR504C TAZ1Q06510 381 aa-1.06□□□□□ -2.58
SPG3YDR504C PST1Q12355 444 aa-1.06□□□□□ -2.58
SPG3YDR504C MAL32P38158 584 aa-1.07□□□□□ -2.58
SPG3YDR504C RCY1P39531 840 aa-1.07□□□□□ -2.58
SPG3YDR504C GDS1P41913 522 aa-1.07□□□□□ -2.58
SPG3YDR504C MAL12P53341 584 aa-1.07□□□□□ -2.58
SPG3YDR504C YPR1Q12458 312 aa-1.07□□□□□ -2.58
SPG3YDR504C MSB2P32334 1306 aa-1.08□□□□□ -2.58
SPG3YDR504C RDS1P25611 832 aa-1.08□□□□□ -2.58
SPG3YDR504C Q0255P03881 472 aa-1.09□□□□□ -2.58
SPG3YDR504C RSR1P13856 272 aa-1.09□□□□□ -2.58
SPG3YDR504C SWC4P53201 476 aa-1.09□□□□□ -2.58
SPG3YDR504C BOP2Q06150 570 aa-1.09□□□□□ -2.58
SPG3YDR504C AKR2Q12013 749 aa-1.09□□□□□ -2.58
SPG3YDR504C YOR114WQ12219 294 aa-1.09□□□□□ -2.58
SPG3YDR504C YIL001WP40560 513 aa-1.1□□□□□ -2.59
SPG3YDR504C UGA1P17649 471 aa-1.11□□□□□ -2.59
SPG3YDR504C RPN12P32496 274 aa-1.11□□□□□ -2.59
SPG3YDR504C ECM13P38195 257 aa-1.11□□□□□ -2.59
SPG3YDR504C BIG1P38813 335 aa-1.11□□□□□ -2.59
SPG3YDR504C CTR2P38865 189 aa-1.11□□□□□ -2.59
SPG3YDR504C YJL055WP47044 245 aa-1.11□□□□□ -2.59
SPG3YDR504C TIM21P53220 239 aa-1.11□□□□□ -2.59
SPG3YDR504C DPP1Q05521 289 aa-1.11□□□□□ -2.59
SPG3YDR504C BUD21Q08492 214 aaPredicted RBP-1.11□□□□□ -2.59
SPG3YDR504C MRPL23Q12487 163 aaPredicted RBP-1.11□□□□□ -2.59
SPG3YDR504C TFB5Q3E7C1 72 aaPredicted RBP-1.11□□□□□ -2.59
SPG3YDR504C RPL6BP05739 176 aaKnown RBP-1.12□□□□□ -2.59
SPG3YDR504C ARC15P40518 154 aaRIP-Chip data-1.12□□□□□ -2.59not detected
SPG3YDR504C YGR026WP53217 278 aa-1.12□□□□□ -2.59
SPG3YDR504C YGR168CP53293 376 aa-1.12□□□□□ -2.59
SPG3YDR504C RPL6AQ02326 176 aaKnown RBP-1.12□□□□□ -2.59
SPG3YDR504C TMA19P35691 167 aaKnown RBP-1.13□□□□□ -2.59
SPG3YDR504C YSW1P38280 609 aa-1.13□□□□□ -2.59
SPG3YDR504C VPS20Q04272 221 aa-1.13□□□□□ -2.59
SPG3YDR504C EMI1Q04406 187 aa-1.13□□□□□ -2.59
Retrieved 100 of 5,963 RNA–protein pairs in 24.4 ms