RNA–Protein interactions for RNA: YDR498C

SEC20, Transcript of Membrane glycoprotein v-SNARE, yeastyeast

Gene SEC20, Length 1,152 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SEC20YDR498C MTC7P32633 139 aa5.1□□□□□ -1.59
SEC20YDR498C PPG1P32838 368 aa5.1□□□□□ -1.59
SEC20YDR498C LST4P34239 828 aa5.1□□□□□ -1.59
SEC20YDR498C COS9P36034 407 aa5.1□□□□□ -1.59
SEC20YDR498C YBR242WP38331 238 aa5.1□□□□□ -1.59
SEC20YDR498C VBA2P38358 474 aaKnown RBP5.1□□□□□ -1.59
SEC20YDR498C MLH1P38920 769 aa5.1□□□□□ -1.59
SEC20YDR498C FLO9P39712 1322 aa5.1□□□□□ -1.59
SEC20YDR498C BUD8P41698 603 aa5.1□□□□□ -1.59
SEC20YDR498C BNA6P43619 295 aa5.1□□□□□ -1.59
SEC20YDR498C CIN2P46670 268 aa5.1□□□□□ -1.59
SEC20YDR498C PGU1P47180 361 aa5.1□□□□□ -1.59
SEC20YDR498C OCA1P50946 238 aaPredicted RBP5.1□□□□□ -1.59
SEC20YDR498C RMD9P53140 646 aaKnown RBP5.1□□□□□ -1.59
SEC20YDR498C YGR066CP53242 292 aa5.1□□□□□ -1.59
SEC20YDR498C YGR126WP53274 230 aa5.1□□□□□ -1.59
SEC20YDR498C OGG1P53397 376 aaPredicted RBP5.1□□□□□ -1.59
SEC20YDR498C NUP116Q02630 1113 aa5.1□□□□□ -1.59
SEC20YDR498C SCS7Q03529 384 aa5.1□□□□□ -1.59
SEC20YDR498C BNA7Q04066 261 aa5.1□□□□□ -1.59
SEC20YDR498C YPL272CQ08984 517 aa5.1□□□□□ -1.59
SEC20YDR498C ORT1Q12375 292 aa5.1□□□□□ -1.59
SEC20YDR498C PAR32Q12515 295 aaKnown RBP5.1□□□□□ -1.59
SEC20YDR498C RAD52P06778 471 aaKnown RBP5.09□□□□□ -1.59
SEC20YDR498C SGA1P08019 549 aa5.09□□□□□ -1.59
SEC20YDR498C PET122P10355 254 aa5.09□□□□□ -1.59
SEC20YDR498C SLC1P33333 303 aa5.09□□□□□ -1.59
SEC20YDR498C ALG3P38179 458 aa5.09□□□□□ -1.59
SEC20YDR498C YJL193WP39542 402 aa5.09□□□□□ -1.59
SEC20YDR498C YIL067CP40514 678 aa5.09□□□□□ -1.59
SEC20YDR498C CUP9P41817 306 aa5.09□□□□□ -1.59
SEC20YDR498C YGR210CP42942 411 aa5.09□□□□□ -1.59
SEC20YDR498C MNN5P46982 586 aa5.09□□□□□ -1.59
SEC20YDR498C SAM37P50110 327 aa5.09□□□□□ -1.59
SEC20YDR498C TYW3P53177 273 aa5.09□□□□□ -1.59
SEC20YDR498C SOK2P53438 785 aaPredicted RBP5.09□□□□□ -1.59
SEC20YDR498C UTP21Q06078 939 aaPredicted RBP5.09□□□□□ -1.59
SEC20YDR498C YPR147CQ06522 304 aaKnown RBP5.09□□□□□ -1.59
SEC20YDR498C YOR376WQ08900 122 aa5.09□□□□□ -1.59
SEC20YDR498C TMS1Q12116 473 aa5.09□□□□□ -1.59
SEC20YDR498C YBR298C-AQ8TGK4 73 aa5.09□□□□□ -1.59
SEC20YDR498C HOM3P10869 527 aa5.08□□□□□ -1.6
SEC20YDR498C NHP6BP11633 99 aaKnown RBP5.08□□□□□ -1.6
SEC20YDR498C STE50P25344 346 aa5.08□□□□□ -1.6
SEC20YDR498C EHD3P28817 500 aa5.08□□□□□ -1.6
SEC20YDR498C AIM3P38266 947 aaKnown RBP5.08□□□□□ -1.6
SEC20YDR498C OM14P38325 134 aa5.08□□□□□ -1.6
SEC20YDR498C YER010CP40011 234 aa5.08□□□□□ -1.6
SEC20YDR498C RFC4P40339 323 aaKnown RBP5.08□□□□□ -1.6
SEC20YDR498C SYG1P40528 902 aa5.08□□□□□ -1.6
SEC20YDR498C OTU1P43558 301 aa5.08□□□□□ -1.6
SEC20YDR498C CCC1P47818 322 aa5.08□□□□□ -1.6
SEC20YDR498C PHB2P50085 310 aa5.08□□□□□ -1.6
SEC20YDR498C YGR042WP53227 271 aa5.08□□□□□ -1.6
SEC20YDR498C VHT1P53241 593 aa5.08□□□□□ -1.6
SEC20YDR498C PEX25Q02969 394 aa5.08□□□□□ -1.6
SEC20YDR498C AIM36Q03798 255 aa5.08□□□□□ -1.6
SEC20YDR498C MRX8Q05473 314 aa5.08□□□□□ -1.6
SEC20YDR498C DCR2Q05924 578 aa5.08□□□□□ -1.6
SEC20YDR498C PEX30Q06169 523 aa5.08□□□□□ -1.6
SEC20YDR498C YLR352WQ06479 807 aa5.08□□□□□ -1.6
SEC20YDR498C IRC19Q07843 230 aa5.08□□□□□ -1.6
SEC20YDR498C MIM1Q08176 113 aa5.08□□□□□ -1.6
SEC20YDR498C MCH4Q08268 501 aa5.08□□□□□ -1.6
SEC20YDR498C RDL2Q08742 149 aaKnown RBP5.08□□□□□ -1.6
SEC20YDR498C REX3Q12090 404 aa5.08□□□□□ -1.6
SEC20YDR498C RTC5Q12108 567 aaKnown RBP5.08□□□□□ -1.6
SEC20YDR498C BAG7Q12128 409 aa5.08□□□□□ -1.6
SEC20YDR498C MDM32Q12171 622 aa5.08□□□□□ -1.6
SEC20YDR498C HTZ1Q12692 134 aaKnown RBP5.08□□□□□ -1.6
SEC20YDR498C MTR10Q99189 972 aa5.08□□□□□ -1.6
SEC20YDR498C PEP4P07267 405 aaKnown RBP5.07□□□□□ -1.6
SEC20YDR498C RIP1P08067 215 aa5.07□□□□□ -1.6
SEC20YDR498C CKS1P20486 150 aaKnown RBP5.07□□□□□ -1.6
SEC20YDR498C SAR1P20606 190 aaKnown RBP5.07□□□□□ -1.6
SEC20YDR498C MCM10P32354 571 aa5.07□□□□□ -1.6
SEC20YDR498C APD1P38281 316 aa5.07□□□□□ -1.6
SEC20YDR498C UME6P39001 836 aa5.07□□□□□ -1.6
SEC20YDR498C RTT105P40063 208 aa5.07□□□□□ -1.6
SEC20YDR498C PRY1P47032 299 aa5.07□□□□□ -1.6
SEC20YDR498C APM1Q00776 475 aaPredicted RBP5.07□□□□□ -1.6
SEC20YDR498C YDR102CQ03864 110 aa5.07□□□□□ -1.6
SEC20YDR498C YRM1Q12340 786 aa5.07□□□□□ -1.6
SEC20YDR498C YOS9Q99220 542 aa5.07□□□□□ -1.6
SEC20YDR498C CDC26P14724 124 aa5.06□□□□□ -1.6
SEC20YDR498C AIM17P23180 465 aaKnown RBP5.06□□□□□ -1.6
SEC20YDR498C DBF20P32328 564 aa5.06□□□□□ -1.6
SEC20YDR498C KRE6P32486 720 aa5.06□□□□□ -1.6
SEC20YDR498C RPC34P32910 317 aa5.06□□□□□ -1.6
SEC20YDR498C MSY1P48527 492 aa5.06□□□□□ -1.6
SEC20YDR498C PCP1P53259 346 aa5.06□□□□□ -1.6
SEC20YDR498C PDR16P53860 351 aaKnown RBP5.06□□□□□ -1.6
SEC20YDR498C YLR152CP54072 576 aa5.06□□□□□ -1.6
SEC20YDR498C DLT1Q04216 342 aa5.06□□□□□ -1.6
SEC20YDR498C UTP15Q04305 513 aaKnown RBP5.06□□□□□ -1.6
SEC20YDR498C VBA4Q04602 768 aaKnown RBP5.06□□□□□ -1.6
SEC20YDR498C GRE1Q08969 168 aa5.06□□□□□ -1.6
SEC20YDR498C AKR2Q12013 749 aa5.06□□□□□ -1.6
SEC20YDR498C YHR214C-EQ8TGK0 99 aa5.06□□□□□ -1.6
SEC20YDR498C YAL064W-BO13512 126 aa5.05□□□□□ -1.6
Retrieved 100 of 5,963 RNA–protein pairs in 70.8 ms