RNA–Protein interactions for RNA: YDR179C

CSN9, Transcript of Subunit of the Cop9 signalosome, yeast

Gene CSN9, Length 489 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CSN9	YDR179C	DPP1	Q05521	289 aa		0.62	□□□□□ -2.31
CSN9	YDR179C	MHT1	Q12525	324 aa		0.62	□□□□□ -2.31
CSN9	YDR179C	YMR316C-A	I2HB70	103 aa		0.61	□□□□□ -2.31
CSN9	YDR179C	FBA1	P14540	359 aa	Known RBP	0.61	□□□□□ -2.31
CSN9	YDR179C	RPS0A	P32905	252 aa	Known RBP	0.61	□□□□□ -2.31
CSN9	YDR179C	GDH2	P33327	1092 aa	Known RBP	0.61	□□□□□ -2.31
CSN9	YDR179C	LIN1	P38852	340 aa	Predicted RBP	0.61	□□□□□ -2.31
CSN9	YDR179C	VTC1	P40046	129 aa	RIP-Chip data	0.61	□□□□□ -2.31	not detected
CSN9	YDR179C	CIS3	P47001	227 aa		0.61	□□□□□ -2.31
CSN9	YDR179C	COX16	P47081	118 aa		0.61	□□□□□ -2.31
CSN9	YDR179C	PBP4	Q07362	185 aa	Known RBP	0.61	□□□□□ -2.31
CSN9	YDR179C	APC9	Q12107	265 aa		0.61	□□□□□ -2.31
CSN9	YDR179C	DCN1	Q12395	269 aa		0.61	□□□□□ -2.31
CSN9	YDR179C	SAS5	Q99314	248 aa		0.61	□□□□□ -2.31
CSN9	YDR179C	GAL3	P13045	520 aa		0.6	□□□□□ -2.31
CSN9	YDR179C	PPH21	P23594	369 aa		0.6	□□□□□ -2.31
CSN9	YDR179C	CAM1	P29547	415 aa	Known RBP	0.6	□□□□□ -2.31
CSN9	YDR179C	YKL063C	P35725	167 aa		0.6	□□□□□ -2.31
CSN9	YDR179C	YKL162C	P36052	402 aa		0.6	□□□□□ -2.31
CSN9	YDR179C	LAS1	P36146	502 aa	Predicted RBP	0.6	□□□□□ -2.31
CSN9	YDR179C	ARN2	P38724	620 aa		0.6	□□□□□ -2.31
CSN9	YDR179C	NUP57	P48837	541 aa		0.6	□□□□□ -2.31
CSN9	YDR179C	NIF3	P53081	288 aa		0.6	□□□□□ -2.31
CSN9	YDR179C	NUP49	Q02199	472 aa		0.6	□□□□□ -2.31
CSN9	YDR179C	YPL077C	Q02831	240 aa		0.6	□□□□□ -2.31
CSN9	YDR179C	TAF9	Q05027	157 aa		0.6	□□□□□ -2.31
CSN9	YDR179C	MSS116	P15424	664 aa	Known RBP	0.59	□□□□□ -2.31
CSN9	YDR179C	MDH2	P22133	377 aa		0.59	□□□□□ -2.31
CSN9	YDR179C	YGL010W	P25338	174 aa		0.59	□□□□□ -2.31
CSN9	YDR179C	SWD2	P36104	329 aa	Predicted RBP	0.59	□□□□□ -2.31
CSN9	YDR179C	AGX1	P43567	385 aa		0.59	□□□□□ -2.31
CSN9	YDR179C	VPS60	Q03390	229 aa		0.59	□□□□□ -2.31
CSN9	YDR179C	TAZ1	Q06510	381 aa		0.59	□□□□□ -2.31
CSN9	YDR179C	YOR114W	Q12219	294 aa		0.59	□□□□□ -2.31
CSN9	YDR179C	PST1	Q12355	444 aa		0.59	□□□□□ -2.31
CSN9	YDR179C	RPC37	P36121	282 aa		0.58	□□□□□ -2.32
CSN9	YDR179C	HMT1	P38074	348 aa		0.58	□□□□□ -2.32
CSN9	YDR179C	YIA6	P40556	373 aa		0.58	□□□□□ -2.32
CSN9	YDR179C	PDR16	P53860	351 aa	Known RBP	0.58	□□□□□ -2.32
CSN9	YDR179C	RCF1	Q03713	159 aa		0.58	□□□□□ -2.32
CSN9	YDR179C	GEP5	Q12393	293 aa		0.58	□□□□□ -2.32
CSN9	YDR179C	FPR1	P20081	114 aa	Known RBP	0.57	□□□□□ -2.32
CSN9	YDR179C	RPL5	P26321	297 aa	Known RBP	0.57	□□□□□ -2.32
CSN9	YDR179C	PEX4	P29340	183 aa		0.57	□□□□□ -2.32
CSN9	YDR179C	MAL32	P38158	584 aa		0.57	□□□□□ -2.32
CSN9	YDR179C	YBR220C	P38318	560 aa		0.57	□□□□□ -2.32
CSN9	YDR179C	DOG1	P38774	246 aa		0.57	□□□□□ -2.32
CSN9	YDR179C	TDA11	P38854	504 aa		0.57	□□□□□ -2.32
CSN9	YDR179C	BMT5	P40493	336 aa		0.57	□□□□□ -2.32
CSN9	YDR179C	OST2	P46964	130 aa		0.57	□□□□□ -2.32
CSN9	YDR179C	GTO1	P48239	356 aa		0.57	□□□□□ -2.32
CSN9	YDR179C	ERG25	P53045	309 aa		0.57	□□□□□ -2.32
CSN9	YDR179C	MAL12	P53341	584 aa		0.57	□□□□□ -2.32
CSN9	YDR179C	AAH1	P53909	347 aa		0.57	□□□□□ -2.32
CSN9	YDR179C	SIA1	Q12212	622 aa		0.57	□□□□□ -2.32
CSN9	YDR179C	PET494	P07390	489 aa	Predicted RBP	0.56	□□□□□ -2.32
CSN9	YDR179C	VMA2	P16140	517 aa	Known RBP	0.56	□□□□□ -2.32
CSN9	YDR179C	SCL1	P21243	252 aa	Known RBP	0.56	□□□□□ -2.32
CSN9	YDR179C	SPT4	P32914	102 aa	Predicted RBP	0.56	□□□□□ -2.32
CSN9	YDR179C	SIF2	P38262	535 aa		0.56	□□□□□ -2.32
CSN9	YDR179C	NPT1	P39683	429 aa	Known RBP	0.56	□□□□□ -2.32
CSN9	YDR179C	FMP41	P53889	259 aa	Known RBP	0.56	□□□□□ -2.32
CSN9	YDR179C	SDC1	Q03323	175 aa		0.56	□□□□□ -2.32
CSN9	YDR179C	BOP2	Q06150	570 aa		0.56	□□□□□ -2.32
CSN9	YDR179C	MEU1	Q07938	337 aa	Known RBP RIP-Chip data	0.56	□□□□□ -2.32	not detected
CSN9	YDR179C	SLD7	Q08457	257 aa		0.56	□□□□□ -2.32
CSN9	YDR179C	YAL064W-B	O13512	126 aa		0.55	□□□□□ -2.32
CSN9	YDR179C	RPS3	P05750	240 aa	Known RBP	0.55	□□□□□ -2.32
CSN9	YDR179C	POX1	P13711	748 aa		0.55	□□□□□ -2.32
CSN9	YDR179C	PEX3	P28795	441 aa		0.55	□□□□□ -2.32
CSN9	YDR179C	SWC5	P38326	303 aa		0.55	□□□□□ -2.32
CSN9	YDR179C	LOH1	P47055	219 aa		0.55	□□□□□ -2.32
CSN9	YDR179C	YJL028W	P47062	111 aa		0.55	□□□□□ -2.32
CSN9	YDR179C	MDM34	P53083	459 aa		0.55	□□□□□ -2.32
CSN9	YDR179C	SLX9	P53251	210 aa	Predicted RBP	0.55	□□□□□ -2.32
CSN9	YDR179C	YNL050C	P53952	270 aa		0.55	□□□□□ -2.32
CSN9	YDR179C	VPS20	Q04272	221 aa		0.55	□□□□□ -2.32
CSN9	YDR179C	GPN3	Q06543	272 aa		0.55	□□□□□ -2.32
CSN9	YDR179C	ASR1	Q06834	288 aa		0.55	□□□□□ -2.32
CSN9	YDR179C	ERP4	Q12450	207 aa		0.55	□□□□□ -2.32
CSN9	YDR179C	ATP6	P00854	259 aa		0.54	□□□□□ -2.32
CSN9	YDR179C	CDC37	P06101	506 aa	Known RBP	0.54	□□□□□ -2.32
CSN9	YDR179C	DSF1	P0CX08	502 aa		0.54	□□□□□ -2.32
CSN9	YDR179C	YNR073C	P0CX09	502 aa		0.54	□□□□□ -2.32
CSN9	YDR179C	POT1	P27796	417 aa	Known RBP RIP-Chip data	0.54	□□□□□ -2.32	not detected
CSN9	YDR179C	CWP1	P28319	239 aa		0.54	□□□□□ -2.32
CSN9	YDR179C	FET3	P38993	636 aa		0.54	□□□□□ -2.32
CSN9	YDR179C	AVT2	P39981	480 aa		0.54	□□□□□ -2.32
CSN9	YDR179C	PRM10	P42946	383 aa		0.54	□□□□□ -2.32
CSN9	YDR179C	IBA57	P47158	497 aa		0.54	□□□□□ -2.32
CSN9	YDR179C	DBP6	P53734	629 aa	Known RBP	0.54	□□□□□ -2.32
CSN9	YDR179C	BUD25	P85052	153 aa		0.54	□□□□□ -2.32
CSN9	YDR179C	PAA1	Q12447	191 aa	Known RBP	0.54	□□□□□ -2.32
CSN9	YDR179C	ILV1	P00927	576 aa	Known RBP	0.53	□□□□□ -2.32
CSN9	YDR179C	RAS2	P01120	322 aa	Known RBP	0.53	□□□□□ -2.32
CSN9	YDR179C	COS2	P0CX12	379 aa		0.53	□□□□□ -2.32
CSN9	YDR179C	COS3	P0CX13	379 aa		0.53	□□□□□ -2.32
CSN9	YDR179C	PET18	P25362	215 aa		0.53	□□□□□ -2.32
CSN9	YDR179C	MDH3	P32419	343 aa	Known RBP RIP-Chip data	0.53	□□□□□ -2.32	not detected
CSN9	YDR179C	ECM13	P38195	257 aa		0.53	□□□□□ -2.32

Retrieved 100 of 5,963 RNA–protein pairs in 19.8 ms