RNA–Protein interactions for RNA: YDR177W

UBC1, Transcript of Ubiquitin-conjugating enzyme, yeast

Gene UBC1, Length 648 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
UBC1	YDR177W	FRT2	P39734	528 aa		4.03	□□□□□ -1.76
UBC1	YDR177W	ERG28	P40030	148 aa		4.03	□□□□□ -1.76
UBC1	YDR177W	BIR1	P47134	954 aa		4.03	□□□□□ -1.76
UBC1	YDR177W	CDH1	P53197	566 aa		4.03	□□□□□ -1.76
UBC1	YDR177W	MAL13	P53338	473 aa		4.03	□□□□□ -1.76
UBC1	YDR177W	NRM1	P53718	249 aa		4.03	□□□□□ -1.76
UBC1	YDR177W	EBS1	Q03466	884 aa	Known RBP	4.03	□□□□□ -1.76
UBC1	YDR177W	FAR10	Q06001	478 aa		4.03	□□□□□ -1.76
UBC1	YDR177W	PEX30	Q06169	523 aa		4.03	□□□□□ -1.76
UBC1	YDR177W	IRC25	Q07951	179 aa		4.03	□□□□□ -1.76
UBC1	YDR177W	ATP16	Q12165	160 aa		4.03	□□□□□ -1.76
UBC1	YDR177W	YCT1	Q12235	531 aa		4.03	□□□□□ -1.76
UBC1	YDR177W	ICT1	Q12385	394 aa		4.03	□□□□□ -1.76
UBC1	YDR177W	NAG1	Q8TGN9	163 aa		4.03	□□□□□ -1.76
UBC1	YDR177W	NUP157	P40064	1391 aa	Known RBP	4.02	□□□□□ -1.77
UBC1	YDR177W	IRC20	Q06554	1556 aa		4.02	□□□□□ -1.77
UBC1	YDR177W	GDB1	Q06625	1536 aa		4.02	□□□□□ -1.77
UBC1	YDR177W	CBF1	P17106	351 aa		4.02	□□□□□ -1.77
UBC1	YDR177W	ECM4	P36156	370 aa		4.02	□□□□□ -1.77
UBC1	YDR177W	BMT2	P38278	337 aa		4.02	□□□□□ -1.77
UBC1	YDR177W	EFM1	P38732	585 aa		4.02	□□□□□ -1.77
UBC1	YDR177W	YAT2	P40017	923 aa		4.02	□□□□□ -1.77
UBC1	YDR177W	DSN1	P40568	576 aa		4.02	□□□□□ -1.77
UBC1	YDR177W	GET1	P53192	235 aa		4.02	□□□□□ -1.77
UBC1	YDR177W	EFM5	P53200	248 aa	Known RBP	4.02	□□□□□ -1.77
UBC1	YDR177W	YNL095C	P53932	642 aa		4.02	□□□□□ -1.77
UBC1	YDR177W	VAC7	P53950	1165 aa		4.02	□□□□□ -1.77
UBC1	YDR177W	YET2	Q04210	160 aa		4.02	□□□□□ -1.77
UBC1	YDR177W	PBA1	Q05778	276 aa		4.02	□□□□□ -1.77
UBC1	YDR177W	ABP140	Q08641	628 aa	Known RBP	4.02	□□□□□ -1.77
UBC1	YDR177W	RRS1	Q08746	203 aa	Known RBP	4.02	□□□□□ -1.77
UBC1	YDR177W	BI3	Q9ZZW7	517 aa		4.02	□□□□□ -1.77
UBC1	YDR177W	DNF2	Q12675	1612 aa		4.02	□□□□□ -1.77
UBC1	YDR177W	SAL1	D6W196	494 aa		4.01	□□□□□ -1.77
UBC1	YDR177W	YAL064W-B	O13512	126 aa		4.01	□□□□□ -1.77
UBC1	YDR177W	RPS3	P05750	240 aa	Known RBP	4.01	□□□□□ -1.77
UBC1	YDR177W	TCP1	P12612	559 aa	Known RBP	4.01	□□□□□ -1.77
UBC1	YDR177W	ARO2	P28777	376 aa	Known RBP	4.01	□□□□□ -1.77
UBC1	YDR177W	HOM6	P31116	359 aa	Known RBP	4.01	□□□□□ -1.77
UBC1	YDR177W	QRI5	P32344	111 aa		4.01	□□□□□ -1.77
UBC1	YDR177W	YBL059W	P34224	193 aa		4.01	□□□□□ -1.77
UBC1	YDR177W	VPS51	P36116	164 aa		4.01	□□□□□ -1.77
UBC1	YDR177W	MRP21	P38175	177 aa		4.01	□□□□□ -1.77
UBC1	YDR177W	HEM14	P40012	539 aa		4.01	□□□□□ -1.77
UBC1	YDR177W	YIL067C	P40514	678 aa		4.01	□□□□□ -1.77
UBC1	YDR177W	YIL001W	P40560	513 aa		4.01	□□□□□ -1.77
UBC1	YDR177W	YJR079W	P47126	109 aa		4.01	□□□□□ -1.77
UBC1	YDR177W	YJR085C	P47131	105 aa	Known RBP	4.01	□□□□□ -1.77
UBC1	YDR177W	IBA57	P47158	497 aa		4.01	□□□□□ -1.77
UBC1	YDR177W	HSH155	P49955	971 aa	Known RBP	4.01	□□□□□ -1.77
UBC1	YDR177W	RNY1	Q02933	434 aa	Known RBP	4.01	□□□□□ -1.77
UBC1	YDR177W	YML018C	Q03730	393 aa		4.01	□□□□□ -1.77
UBC1	YDR177W	YPR098C	Q06089	161 aa		4.01	□□□□□ -1.77
UBC1	YDR177W	ATG17	Q06410	417 aa		4.01	□□□□□ -1.77
UBC1	YDR177W	TAZ1	Q06510	381 aa		4.01	□□□□□ -1.77
UBC1	YDR177W	PDR12	Q02785	1511 aa		4	□□□□□ -1.77
UBC1	YDR177W	TY3B-G	Q99315	1547 aa		4	□□□□□ -1.77
UBC1	YDR177W	YBT1	P32386	1661 aa		4	□□□□□ -1.77
UBC1	YDR177W	HTB1	P02293	131 aa	Known RBP	4	□□□□□ -1.77
UBC1	YDR177W	HTB2	P02294	131 aa		4	□□□□□ -1.77
UBC1	YDR177W	PMT2	P31382	759 aa		4	□□□□□ -1.77
UBC1	YDR177W	AEP1	P32493	518 aa		4	□□□□□ -1.77
UBC1	YDR177W	TRM5	P38793	499 aa		4	□□□□□ -1.77
UBC1	YDR177W	RTC3	P38804	111 aa	Predicted RBP	4	□□□□□ -1.77
UBC1	YDR177W	EGD2	P38879	174 aa	Known RBP	4	□□□□□ -1.77
UBC1	YDR177W	EGT2	P42835	1041 aa		4	□□□□□ -1.77
UBC1	YDR177W	MIC26	P50087	233 aa		4	□□□□□ -1.77
UBC1	YDR177W	NBP1	P52919	319 aa	Predicted RBP	4	□□□□□ -1.77
UBC1	YDR177W	JLP1	Q12358	412 aa		4	□□□□□ -1.77
UBC1	YDR177W	YKL183C-A	Q3E765	70 aa		4	□□□□□ -1.77
UBC1	YDR177W	YCL021W-A	Q96VH3	125 aa		4	□□□□□ -1.77
UBC1	YDR177W	IQG1	Q12280	1495 aa		3.99	□□□□□ -1.77
UBC1	YDR177W	RAD9	P14737	1309 aa		3.99	□□□□□ -1.77
UBC1	YDR177W	PDR10	P51533	1564 aa		3.99	□□□□□ -1.77
UBC1	YDR177W	CAM1	P29547	415 aa	Known RBP	3.99	□□□□□ -1.77
UBC1	YDR177W	ATP7	P30902	174 aa		3.99	□□□□□ -1.77
UBC1	YDR177W	CDC13	P32797	924 aa	Known RBP	3.99	□□□□□ -1.77
UBC1	YDR177W	YKL187C	P34231	750 aa		3.99	□□□□□ -1.77
UBC1	YDR177W	MRPL10	P36520	322 aa		3.99	□□□□□ -1.77
UBC1	YDR177W	SOL2	P37262	315 aa		3.99	□□□□□ -1.77
UBC1	YDR177W	RCK1	P38622	512 aa		3.99	□□□□□ -1.77
UBC1	YDR177W	CHL4	P38907	458 aa		3.99	□□□□□ -1.77
UBC1	YDR177W	SMB1	P40018	196 aa	Known RBP	3.99	□□□□□ -1.77
UBC1	YDR177W	YER186C	P40101	306 aa		3.99	□□□□□ -1.77
UBC1	YDR177W	YNL194C	P40169	301 aa		3.99	□□□□□ -1.77
UBC1	YDR177W	YPS5	P53057	165 aa		3.99	□□□□□ -1.77
UBC1	YDR177W	TPN1	P53099	579 aa		3.99	□□□□□ -1.77
UBC1	YDR177W	CRH1	P53301	507 aa		3.99	□□□□□ -1.77
UBC1	YDR177W	RNH201	P53942	307 aa		3.99	□□□□□ -1.77
UBC1	YDR177W	YNL040W	P53960	456 aa	Predicted RBP	3.99	□□□□□ -1.77
UBC1	YDR177W	RHO3	Q00245	231 aa	Known RBP	3.99	□□□□□ -1.77
UBC1	YDR177W	PRP38	Q00723	242 aa	Predicted RBP	3.99	□□□□□ -1.77
UBC1	YDR177W	VPS60	Q03390	229 aa		3.99	□□□□□ -1.77
UBC1	YDR177W	SEC13	Q04491	297 aa	Known RBP	3.99	□□□□□ -1.77
UBC1	YDR177W	YHC1	Q05900	231 aa	Known RBP	3.99	□□□□□ -1.77
UBC1	YDR177W	HRI1	Q05905	244 aa	Known RBP	3.99	□□□□□ -1.77
UBC1	YDR177W	DIB1	Q06819	143 aa	Predicted RBP	3.99	□□□□□ -1.77
UBC1	YDR177W	PLB3	Q08108	686 aa		3.99	□□□□□ -1.77
UBC1	YDR177W	SRO7	Q12038	1033 aa		3.99	□□□□□ -1.77
UBC1	YDR177W	TIP41	Q12199	356 aa		3.99	□□□□□ -1.77

Retrieved 100 of 5,963 RNA–protein pairs in 52.3 ms