RNA–Protein interactions for RNA: YDL147W

RPN5, Transcript of Subunit of the CSN and 26S proteasome lid complexes, yeast

Gene RPN5, Length 1,338 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RPN5	YDL147W	STH1	P32597	1359 aa		4.24	□□□□□ -1.73
RPN5	YDL147W	RPS19A	P07280	144 aa	Known RBP	4.23	□□□□□ -1.73
RPN5	YDL147W	RPS19B	P07281	144 aa	Predicted RBP	4.23	□□□□□ -1.73
RPN5	YDL147W	RPL4A	P10664	362 aa	Known RBP	4.23	□□□□□ -1.73
RPN5	YDL147W	QRI5	P32344	111 aa		4.23	□□□□□ -1.73
RPN5	YDL147W	YOX1	P34161	385 aa		4.23	□□□□□ -1.73
RPN5	YDL147W	RPL4B	P49626	362 aa	Known RBP	4.23	□□□□□ -1.73
RPN5	YDL147W	YGR018C	P53211	109 aa		4.23	□□□□□ -1.73
RPN5	YDL147W	GRX3	Q03835	250 aa		4.23	□□□□□ -1.73
RPN5	YDL147W	MYO5	Q04439	1219 aa	Known RBP	4.23	□□□□□ -1.73
RPN5	YDL147W	DFM1	Q12743	341 aa	Known RBP	4.23	□□□□□ -1.73
RPN5	YDL147W	FLO11	P08640	1367 aa		4.23	□□□□□ -1.73
RPN5	YDL147W	TDH2	P00358	332 aa	Known RBP	4.22	□□□□□ -1.73
RPN5	YDL147W	LDB7	P38210	180 aa		4.22	□□□□□ -1.73
RPN5	YDL147W	ASP1	P38986	381 aa	Predicted RBP	4.22	□□□□□ -1.73
RPN5	YDL147W	UFE1	P41834	346 aa		4.22	□□□□□ -1.73
RPN5	YDL147W	CAX4	P53223	239 aa		4.22	□□□□□ -1.73
RPN5	YDL147W	CSM4	Q08955	156 aa		4.22	□□□□□ -1.73
RPN5	YDL147W	OSM1	P21375	501 aa	Known RBP	4.21	□□□□□ -1.73
RPN5	YDL147W	DBP7	P36120	742 aa	Known RBP	4.21	□□□□□ -1.73
RPN5	YDL147W	MRPS9	P38120	278 aa		4.21	□□□□□ -1.73
RPN5	YDL147W	SER33	P40510	469 aa		4.21	□□□□□ -1.73
RPN5	YDL147W	DSN1	P40568	576 aa		4.21	□□□□□ -1.73
RPN5	YDL147W	COQ5	P49017	307 aa		4.21	□□□□□ -1.73
RPN5	YDL147W	ASI3	P53983	676 aa		4.21	□□□□□ -1.73
RPN5	YDL147W	ECM19	Q06011	112 aa		4.21	□□□□□ -1.73
RPN5	YDL147W	TIR4	Q12218	487 aa	Predicted RBP	4.21	□□□□□ -1.73
RPN5	YDL147W	YPL119C-A	Q3E751	87 aa		4.21	□□□□□ -1.73
RPN5	YDL147W	YOL085C	Q99345	113 aa		4.21	□□□□□ -1.73
RPN5	YDL147W	RPB4	P20433	221 aa	Predicted RBP	4.21	□□□□□ -1.74
RPN5	YDL147W	YCR025C	P25352	136 aa		4.21	□□□□□ -1.74
RPN5	YDL147W	CAT2	P32796	670 aa	Known RBP	4.21	□□□□□ -1.74
RPN5	YDL147W	NBP35	P52920	328 aa		4.21	□□□□□ -1.74
RPN5	YDL147W	YNL095C	P53932	642 aa		4.21	□□□□□ -1.74
RPN5	YDL147W	SWS2	P53937	143 aa		4.21	□□□□□ -1.74
RPN5	YDL147W	MRX8	Q05473	314 aa		4.21	□□□□□ -1.74
RPN5	YDL147W	PEX10	Q05568	337 aa		4.21	□□□□□ -1.74
RPN5	YDL147W	SNU23	Q12368	194 aa	Predicted RBP	4.21	□□□□□ -1.74
RPN5	YDL147W	AUS1	Q08409	1394 aa		4.2	□□□□□ -1.74
RPN5	YDL147W	RPL24B	P24000	155 aa	Known RBP	4.2	□□□□□ -1.74
RPN5	YDL147W	ATG15	P25641	520 aa		4.2	□□□□□ -1.74
RPN5	YDL147W	DOA4	P32571	926 aa		4.2	□□□□□ -1.74
RPN5	YDL147W	JEN1	P36035	616 aa		4.2	□□□□□ -1.74
RPN5	YDL147W	PHO89	P38361	574 aa		4.2	□□□□□ -1.74
RPN5	YDL147W	SEO1	P39709	593 aa		4.2	□□□□□ -1.74
RPN5	YDL147W	FRT2	P39734	528 aa		4.2	□□□□□ -1.74
RPN5	YDL147W	YER184C	P39961	794 aa		4.2	□□□□□ -1.74
RPN5	YDL147W	AVT6	P40074	448 aa		4.2	□□□□□ -1.74
RPN5	YDL147W	MSS2	P40990	351 aa		4.2	□□□□□ -1.74
RPN5	YDL147W	OTU1	P43558	301 aa		4.2	□□□□□ -1.74
RPN5	YDL147W	USE1	P53146	245 aa		4.2	□□□□□ -1.74
RPN5	YDL147W	DIB1	Q06819	143 aa	Predicted RBP	4.2	□□□□□ -1.74
RPN5	YDL147W	SNF8	Q12483	233 aa		4.2	□□□□□ -1.74
RPN5	YDL147W	AI5_BETA	Q9ZZX0	354 aa		4.2	□□□□□ -1.74
RPN5	YDL147W	MATALPHA1	P0CY06	175 aa		4.19	□□□□□ -1.74
RPN5	YDL147W	HMLALPHA1	P0CY07	175 aa		4.19	□□□□□ -1.74
RPN5	YDL147W	CKA2	P19454	339 aa		4.19	□□□□□ -1.74
RPN5	YDL147W	PPA2	P28239	310 aa		4.19	□□□□□ -1.74
RPN5	YDL147W	HEK2	P38199	381 aa	Known RBP RIP-Chip data	4.19	□□□□□ -1.74	not detected
RPN5	YDL147W	POP8	P38208	133 aa		4.19	□□□□□ -1.74
RPN5	YDL147W	SMB1	P40018	196 aa	Known RBP	4.19	□□□□□ -1.74
RPN5	YDL147W	THO1	P40040	218 aa	Known RBP	4.19	□□□□□ -1.74
RPN5	YDL147W	GLG2	P47011	380 aa		4.19	□□□□□ -1.74
RPN5	YDL147W	HSH155	P49955	971 aa	Known RBP	4.19	□□□□□ -1.74
RPN5	YDL147W	SDC1	Q03323	175 aa		4.19	□□□□□ -1.74
RPN5	YDL147W	NNT1	Q05874	261 aa		4.19	□□□□□ -1.74
RPN5	YDL147W	YDL144C	Q07589	356 aa		4.19	□□□□□ -1.74
RPN5	YDL147W	RRS1	Q08746	203 aa	Known RBP	4.19	□□□□□ -1.74
RPN5	YDL147W	YAL063C-A	Q3E791	96 aa		4.19	□□□□□ -1.74
RPN5	YDL147W	POX1	P13711	748 aa		4.18	□□□□□ -1.74
RPN5	YDL147W	PHO80	P20052	293 aa		4.18	□□□□□ -1.74
RPN5	YDL147W	COX10	P21592	462 aa		4.18	□□□□□ -1.74
RPN5	YDL147W	HOM6	P31116	359 aa	Known RBP	4.18	□□□□□ -1.74
RPN5	YDL147W	YKT6	P36015	200 aa	Known RBP	4.18	□□□□□ -1.74
RPN5	YDL147W	MID2	P36027	376 aa		4.18	□□□□□ -1.74
RPN5	YDL147W	FZO1	P38297	855 aa		4.18	□□□□□ -1.74
RPN5	YDL147W	MED8	P38304	223 aa		4.18	□□□□□ -1.74
RPN5	YDL147W	YGR067C	P53243	804 aa		4.18	□□□□□ -1.74
RPN5	YDL147W	SLX9	P53251	210 aa	Predicted RBP	4.18	□□□□□ -1.74
RPN5	YDL147W	NOP13	P53883	403 aa	Known RBP RIP-Chip data	4.18	□□□□□ -1.74	not detected
RPN5	YDL147W	PGA2	P53903	129 aa		4.18	□□□□□ -1.74
RPN5	YDL147W	ATG17	Q06410	417 aa		4.18	□□□□□ -1.74
RPN5	YDL147W	RLP24	Q07915	199 aa	Known RBP	4.18	□□□□□ -1.74
RPN5	YDL147W	YCT1	Q12235	531 aa		4.18	□□□□□ -1.74
RPN5	YDL147W	FUS3	P16892	353 aa	Known RBP	4.17	□□□□□ -1.74
RPN5	YDL147W	MRPL25	P23369	157 aa		4.17	□□□□□ -1.74
RPN5	YDL147W	YHI9	P38765	294 aa		4.17	□□□□□ -1.74
RPN5	YDL147W	RPE1	P46969	238 aa		4.17	□□□□□ -1.74
RPN5	YDL147W	SWT21	P53873	357 aa	Predicted RBP	4.17	□□□□□ -1.74
RPN5	YDL147W	FMP41	P53889	259 aa	Known RBP	4.17	□□□□□ -1.74
RPN5	YDL147W	ECM11	Q04110	302 aa		4.17	□□□□□ -1.74
RPN5	YDL147W	LOA1	Q06508	300 aa		4.17	□□□□□ -1.74
RPN5	YDL147W	NHP6B	P11633	99 aa	Known RBP	4.16	□□□□□ -1.74
RPN5	YDL147W	RPB9	P27999	122 aa		4.16	□□□□□ -1.74
RPN5	YDL147W	ERG2	P32352	222 aa		4.16	□□□□□ -1.74
RPN5	YDL147W	BDH1	P39714	382 aa		4.16	□□□□□ -1.74
RPN5	YDL147W	HOC1	P47124	396 aa		4.16	□□□□□ -1.74
RPN5	YDL147W	CGR1	P53188	120 aa		4.16	□□□□□ -1.74
RPN5	YDL147W	GIS2	P53849	153 aa	Known RBP RIP-Chip data	4.16	□□□□□ -1.74	not detected
RPN5	YDL147W	ACT1	P60010	375 aa	Known RBP	4.16	□□□□□ -1.74

Retrieved 100 of 5,963 RNA–protein pairs in 21.5 ms