RNA–Protein interactions for RNA: YDL140C

RPO21, Transcript of RNA polymerase II largest subunit B220, yeastyeast

Gene RPO21, Length 5,202 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPO21YDL140C YHR219WP38900 624 aa3.44□□□□□ -1.86
RPO21YDL140C ABF2Q02486 183 aa3.44□□□□□ -1.86
RPO21YDL140C YMR090WQ04304 227 aaKnown RBP3.44□□□□□ -1.86
RPO21YDL140C DYN3Q04949 312 aa3.44□□□□□ -1.86
RPO21YDL140C RPP1AP05318 106 aaPredicted RBP3.44□□□□□ -1.86
RPO21YDL140C RFA2P26754 273 aaKnown RBP3.44□□□□□ -1.86
RPO21YDL140C ERG2P32352 222 aa3.44□□□□□ -1.86
RPO21YDL140C MRP20P32387 263 aa3.44□□□□□ -1.86
RPO21YDL140C YSC84P32793 468 aa3.44□□□□□ -1.86
RPO21YDL140C RIB5P38145 238 aa3.44□□□□□ -1.86
RPO21YDL140C TRM5P38793 499 aa3.44□□□□□ -1.86
RPO21YDL140C NVJ1P38881 321 aa3.44□□□□□ -1.86
RPO21YDL140C DDI1P40087 428 aa3.44□□□□□ -1.86
RPO21YDL140C SNO3P43544 222 aa3.44□□□□□ -1.86
RPO21YDL140C YPT32P51996 222 aaKnown RBP3.44□□□□□ -1.86
RPO21YDL140C DUG3P53871 357 aa3.44□□□□□ -1.86
RPO21YDL140C RNH201P53942 307 aa3.44□□□□□ -1.86
RPO21YDL140C ECM9Q02202 377 aa3.44□□□□□ -1.86
RPO21YDL140C YPL108WQ02872 168 aaPredicted RBP3.44□□□□□ -1.86
RPO21YDL140C YMR155WQ03795 547 aa3.44□□□□□ -1.86
RPO21YDL140C ERP1Q05359 219 aaKnown RBP3.44□□□□□ -1.86
RPO21YDL140C HEM4P06174 275 aa3.44□□□□□ -1.86
RPO21YDL140C RPL20AP0CX23 172 aaKnown RBP3.44□□□□□ -1.86
RPO21YDL140C RPL20BP0CX24 172 aaPredicted RBP3.44□□□□□ -1.86
RPO21YDL140C YAP1P19880 650 aaKnown RBP3.44□□□□□ -1.86
RPO21YDL140C FAT1P38225 669 aa3.44□□□□□ -1.86
RPO21YDL140C MUP3P38734 546 aa3.44□□□□□ -1.86
RPO21YDL140C RRF1P38771 230 aa3.44□□□□□ -1.86
RPO21YDL140C YCK3P39962 524 aa3.44□□□□□ -1.86
RPO21YDL140C ATG18P43601 500 aa3.44□□□□□ -1.86
RPO21YDL140C PMT5P52867 743 aa3.44□□□□□ -1.86
RPO21YDL140C SCS3P53012 380 aa3.44□□□□□ -1.86
RPO21YDL140C YGR042WP53227 271 aa3.44□□□□□ -1.86
RPO21YDL140C MRP51Q02950 344 aa3.44□□□□□ -1.86
RPO21YDL140C YMR209CQ03648 457 aa3.44□□□□□ -1.86
RPO21YDL140C RPC11Q04307 110 aaPredicted RBP3.44□□□□□ -1.86
RPO21YDL140C ACM1Q08981 209 aa3.44□□□□□ -1.86
RPO21YDL140C SUS1Q6WNK7 96 aa3.44□□□□□ -1.86
RPO21YDL140C AAC3P18238 307 aa3.43□□□□□ -1.86
RPO21YDL140C ATP10P18496 279 aa3.43□□□□□ -1.86
RPO21YDL140C MRPS5P33759 307 aa3.43□□□□□ -1.86
RPO21YDL140C SOP4P39543 234 aaPredicted RBP3.43□□□□□ -1.86
RPO21YDL140C ALY2P47029 1046 aa3.43□□□□□ -1.86
RPO21YDL140C YJR011CP47086 261 aaPredicted RBP3.43□□□□□ -1.86
RPO21YDL140C TDA7P53882 636 aaPredicted RBP3.43□□□□□ -1.86
RPO21YDL140C YLR031WQ07978 186 aa3.43□□□□□ -1.86
RPO21YDL140C YCK1P23291 538 aa3.43□□□□□ -1.86
RPO21YDL140C YKL187CP34231 750 aa3.43□□□□□ -1.86
RPO21YDL140C AIM2P39721 246 aa3.43□□□□□ -1.86
RPO21YDL140C GPI15P53961 229 aa3.43□□□□□ -1.86
RPO21YDL140C RSM28Q03430 361 aa3.43□□□□□ -1.86
RPO21YDL140C YAP6Q03935 383 aa3.43□□□□□ -1.86
RPO21YDL140C YLR224WQ05947 369 aa3.43□□□□□ -1.86
RPO21YDL140C DCS1Q06151 350 aa3.43□□□□□ -1.86
RPO21YDL140C ENV7Q12003 364 aa3.43□□□□□ -1.86
RPO21YDL140C COX1P00401 534 aa3.43□□□□□ -1.86
RPO21YDL140C FPS1P23900 669 aa3.43□□□□□ -1.86
RPO21YDL140C HEK2P38199 381 aaKnown RBP RIP-Chip data3.43□□□□□ -1.86 RIP-Chip
RPO21YDL140C GZF3P42944 551 aaKnown RBP3.43□□□□□ -1.86
RPO21YDL140C JHD2P47156 728 aaPredicted RBP3.43□□□□□ -1.86
RPO21YDL140C SNX3Q08826 162 aaKnown RBP3.43□□□□□ -1.86
RPO21YDL140C INP53Q12271 1107 aa3.43□□□□□ -1.86
RPO21YDL140C NCA2Q12374 616 aa3.43□□□□□ -1.86
RPO21YDL140C HTZ1Q12692 134 aaKnown RBP3.43□□□□□ -1.86
RPO21YDL140C YOL163WP0CF20 169 aa3.43□□□□□ -1.86
RPO21YDL140C NTG1P31378 399 aa3.43□□□□□ -1.86
RPO21YDL140C PTM1P32857 523 aa3.43□□□□□ -1.86
RPO21YDL140C YMR087WQ04299 284 aa3.43□□□□□ -1.86
RPO21YDL140C MRPL51Q06090 140 aaPredicted RBP3.43□□□□□ -1.86
RPO21YDL140C PAA1Q12447 191 aaKnown RBP3.43□□□□□ -1.86
RPO21YDL140C YOS1Q3E834 85 aa3.43□□□□□ -1.86
RPO21YDL140C CUP1-1P0CX80 61 aa3.42□□□□□ -1.86
RPO21YDL140C CUP1-2P0CX81 61 aa3.42□□□□□ -1.86
RPO21YDL140C MAK32P23060 363 aa3.42□□□□□ -1.86
RPO21YDL140C PUG1P40100 303 aa3.42□□□□□ -1.86
RPO21YDL140C PCL7P40186 285 aa3.42□□□□□ -1.86
RPO21YDL140C HIS6P40545 261 aa3.42□□□□□ -1.86
RPO21YDL140C TOS8P53147 276 aa3.42□□□□□ -1.86
RPO21YDL140C YNR071CP53757 342 aa3.42□□□□□ -1.86
RPO21YDL140C ISU1Q03020 165 aa3.42□□□□□ -1.86
RPO21YDL140C FMN1Q03778 218 aa3.42□□□□□ -1.86
RPO21YDL140C GAS2Q06135 555 aa3.42□□□□□ -1.86
RPO21YDL140C BNI1P41832 1953 aa3.42□□□□□ -1.86
RPO21YDL140C APA2P22108 325 aa3.42□□□□□ -1.86
RPO21YDL140C RRP7P25368 297 aaPredicted RBP3.42□□□□□ -1.86
RPO21YDL140C BOS1P25385 244 aa3.42□□□□□ -1.86
RPO21YDL140C MIG1P27705 504 aa3.42□□□□□ -1.86
RPO21YDL140C MTC7P32633 139 aa3.42□□□□□ -1.86
RPO21YDL140C AFR1P33304 620 aa3.42□□□□□ -1.86
RPO21YDL140C TEM1P38987 245 aa3.42□□□□□ -1.86
RPO21YDL140C TDA10P42938 290 aa3.42□□□□□ -1.86
RPO21YDL140C ERG25P53045 309 aa3.42□□□□□ -1.86
RPO21YDL140C DMA2P53924 522 aa3.42□□□□□ -1.86
RPO21YDL140C YLR152CP54072 576 aa3.42□□□□□ -1.86
RPO21YDL140C ABZ2Q03266 374 aa3.42□□□□□ -1.86
RPO21YDL140C YML018CQ03730 393 aa3.42□□□□□ -1.86
RPO21YDL140C GRC3Q07845 632 aa3.42□□□□□ -1.86
RPO21YDL140C YLR111WQ12528 110 aa3.42□□□□□ -1.86
RPO21YDL140C DET1Q99288 334 aaKnown RBP3.42□□□□□ -1.86
RPO21YDL140C TPI1P00942 248 aaKnown RBP3.42□□□□□ -1.86
Retrieved 100 of 5,963 RNA–protein pairs in 14.3 ms