RNA–Protein interactions for RNA: YDL105W

NSE4, Transcript of Component of the SMC5-SMC6 complex, yeastyeast

Gene NSE4, Length 1,209 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NSE4YDL105W SPL2P38839 148 aa2.09□□□□□ -2.07
NSE4YDL105W SCC4P40090 624 aa2.09□□□□□ -2.07
NSE4YDL105W MND1P53102 219 aa2.09□□□□□ -2.07
NSE4YDL105W FEX1Q08913 375 aa2.09□□□□□ -2.07
NSE4YDL105W FEX2Q08991 375 aa2.09□□□□□ -2.07
NSE4YDL105W ATG5Q12380 294 aa2.09□□□□□ -2.07
NSE4YDL105W YEL009C-AA0A023PZF2 135 aa2.08□□□□□ -2.08
NSE4YDL105W YAL064W-BO13512 126 aa2.08□□□□□ -2.08
NSE4YDL105W ZWF1P11412 505 aaKnown RBP2.08□□□□□ -2.08
NSE4YDL105W RRT12P25381 491 aa2.08□□□□□ -2.08
NSE4YDL105W SUR2P38992 349 aa2.08□□□□□ -2.08
NSE4YDL105W IBA57P47158 497 aa2.08□□□□□ -2.08
NSE4YDL105W PEX31P53203 462 aa2.08□□□□□ -2.08
NSE4YDL105W SYF2P53277 215 aaPredicted RBP2.08□□□□□ -2.08
NSE4YDL105W CLP1Q08685 445 aaPredicted RBP2.08□□□□□ -2.08
NSE4YDL105W PER33Q12144 273 aa2.08□□□□□ -2.08
NSE4YDL105W FMP16Q12497 93 aa2.08□□□□□ -2.08
NSE4YDL105W TDH1P00360 332 aaKnown RBP2.07□□□□□ -2.08
NSE4YDL105W RPS3P05750 240 aaKnown RBP2.07□□□□□ -2.08
NSE4YDL105W SSA3P09435 649 aaKnown RBP2.07□□□□□ -2.08
NSE4YDL105W ATG15P25641 520 aa2.07□□□□□ -2.08
NSE4YDL105W PEX3P28795 441 aa2.07□□□□□ -2.08
NSE4YDL105W YER084WP40057 128 aa2.07□□□□□ -2.08
NSE4YDL105W EMC2P47133 292 aaKnown RBP2.07□□□□□ -2.08
NSE4YDL105W SPP2Q02521 185 aa2.07□□□□□ -2.08
NSE4YDL105W TRM44Q02648 567 aaKnown RBP2.07□□□□□ -2.08
NSE4YDL105W MIX17Q03667 156 aa2.07□□□□□ -2.08
NSE4YDL105W SFH1Q06168 426 aa2.07□□□□□ -2.08
NSE4YDL105W SEC10Q06245 871 aa2.07□□□□□ -2.08
NSE4YDL105W ISD11Q6Q560 94 aa2.07□□□□□ -2.08
NSE4YDL105W PAN1P32521 1480 aa2.07□□□□□ -2.08
NSE4YDL105W HIS3P06633 220 aa2.06□□□□□ -2.08
NSE4YDL105W BMH1P29311 267 aaKnown RBP2.06□□□□□ -2.08
NSE4YDL105W RIB7P33312 244 aa2.06□□□□□ -2.08
NSE4YDL105W SHC1P39000 512 aa2.06□□□□□ -2.08
NSE4YDL105W TIM21P53220 239 aa2.06□□□□□ -2.08
NSE4YDL105W YNL095CP53932 642 aa2.06□□□□□ -2.08
NSE4YDL105W VBA1Q04301 562 aa2.06□□□□□ -2.08
NSE4YDL105W CDD1Q06549 142 aa2.06□□□□□ -2.08
NSE4YDL105W YOS9Q99220 542 aa2.06□□□□□ -2.08
NSE4YDL105W FMP33P46998 180 aa2.05□□□□□ -2.08
NSE4YDL105W YJR141WP47172 347 aaPredicted RBP2.05□□□□□ -2.08
NSE4YDL105W OST3P48439 350 aa2.05□□□□□ -2.08
NSE4YDL105W FMP41P53889 259 aaKnown RBP2.05□□□□□ -2.08
NSE4YDL105W RRP36Q12481 300 aaPredicted RBP2.05□□□□□ -2.08
NSE4YDL105W RPL24AP04449 155 aaKnown RBP2.04□□□□□ -2.08
NSE4YDL105W CSG2P35206 410 aa2.04□□□□□ -2.08
NSE4YDL105W MRPL37P36532 105 aa2.04□□□□□ -2.08
NSE4YDL105W YER188WP40103 239 aa2.04□□□□□ -2.08
NSE4YDL105W TAD2P47058 250 aa2.04□□□□□ -2.08
NSE4YDL105W LAP3Q01532 483 aaKnown RBP RIP-Chip data2.04□□□□□ -2.08not detected
NSE4YDL105W SDC1Q03323 175 aa2.04□□□□□ -2.08
NSE4YDL105W GMC2Q06201 188 aa2.04□□□□□ -2.08
NSE4YDL105W SSK22P25390 1331 aaPredicted RBP2.03□□□□□ -2.08
NSE4YDL105W RPL4AP10664 362 aaKnown RBP2.03□□□□□ -2.08
NSE4YDL105W MET16P18408 261 aaPredicted RBP2.03□□□□□ -2.08
NSE4YDL105W POF1P25576 258 aa2.03□□□□□ -2.08
NSE4YDL105W HMT1P38074 348 aa2.03□□□□□ -2.08
NSE4YDL105W ATG12P38316 186 aa2.03□□□□□ -2.08
NSE4YDL105W HSM3P38348 480 aa2.03□□□□□ -2.08
NSE4YDL105W SPT8P38915 602 aa2.03□□□□□ -2.08
NSE4YDL105W PET100P38958 111 aa2.03□□□□□ -2.08
NSE4YDL105W RPL4BP49626 362 aaKnown RBP2.03□□□□□ -2.08
NSE4YDL105W SLX9P53251 210 aaPredicted RBP2.03□□□□□ -2.08
NSE4YDL105W LSB1P53281 241 aa2.03□□□□□ -2.08
NSE4YDL105W YPL039WQ03080 316 aa2.03□□□□□ -2.08
NSE4YDL105W CTR3Q06686 241 aa2.03□□□□□ -2.08
NSE4YDL105W YOL019WQ08157 551 aa2.03□□□□□ -2.08
NSE4YDL105W ARN2P38724 620 aa2.02□□□□□ -2.09
NSE4YDL105W NPT1P39683 429 aaKnown RBP2.02□□□□□ -2.09
NSE4YDL105W MPP6P53725 186 aaPredicted RBP2.02□□□□□ -2.09
NSE4YDL105W MNT4P53745 580 aa2.02□□□□□ -2.09
NSE4YDL105W FCF1Q05498 189 aaPredicted RBP2.02□□□□□ -2.09
NSE4YDL105W LOA1Q06508 300 aa2.02□□□□□ -2.09
NSE4YDL105W AI5_BETAQ9ZZX0 354 aa2.02□□□□□ -2.09
NSE4YDL105W SFC1P33303 322 aa2.01□□□□□ -2.09
NSE4YDL105W COY1P34237 679 aa2.01□□□□□ -2.09
NSE4YDL105W YUH1P35127 236 aa2.01□□□□□ -2.09
NSE4YDL105W RCY1P39531 840 aa2.01□□□□□ -2.09
NSE4YDL105W SER33P40510 469 aa2.01□□□□□ -2.09
NSE4YDL105W PIR5P46999 287 aa2.01□□□□□ -2.09
NSE4YDL105W KAP114P53067 1004 aa2.01□□□□□ -2.09
NSE4YDL105W NIF3P53081 288 aa2.01□□□□□ -2.09
NSE4YDL105W SSU72P53538 206 aaPredicted RBP2.01□□□□□ -2.09
NSE4YDL105W RGM1Q00453 211 aa2.01□□□□□ -2.09
NSE4YDL105W ATC1Q04005 294 aa2.01□□□□□ -2.09
NSE4YDL105W KAP95Q06142 861 aaKnown RBP2.01□□□□□ -2.09
NSE4YDL105W YBL112CQ3E7Y4 105 aa2.01□□□□□ -2.09
NSE4YDL105W HIS1P00498 297 aaKnown RBP2□□□□□ -2.09
NSE4YDL105W HEK2P38199 381 aaKnown RBP RIP-Chip data2□□□□□ -2.09not detected
NSE4YDL105W MED6P38782 295 aa2□□□□□ -2.09
NSE4YDL105W COA1P40452 197 aa2□□□□□ -2.09
NSE4YDL105W PEX10Q05568 337 aa2□□□□□ -2.09
NSE4YDL105W ARV1Q06541 321 aa2□□□□□ -2.09
NSE4YDL105W SMT3Q12306 101 aaKnown RBP2□□□□□ -2.09
NSE4YDL105W SME1Q12330 94 aaPredicted RBP2□□□□□ -2.09
NSE4YDL105W AGC1Q12482 902 aa2□□□□□ -2.09
NSE4YDL105W INO80P53115 1489 aa2□□□□□ -2.09
NSE4YDL105W STH1P32597 1359 aa1.99□□□□□ -2.09
NSE4YDL105W RPP0P05317 312 aaKnown RBP1.99□□□□□ -2.09
Retrieved 100 of 5,963 RNA–protein pairs in 19.1 ms