RNA–Protein interactions for RNA: YDL091C

UBX3, Transcript of Subunit of the DSC ubiquitin ligase complex, yeastyeast

Gene UBX3, Length 1,368 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBX3YDL091C COX10P21592 462 aa2.16□□□□□ -2.06
UBX3YDL091C YCR016WP25617 290 aaKnown RBP2.16□□□□□ -2.06
UBX3YDL091C ICL1P28240 557 aaPredicted RBP2.16□□□□□ -2.06
UBX3YDL091C YKL187CP34231 750 aa2.16□□□□□ -2.06
UBX3YDL091C RPC25P35718 212 aa2.16□□□□□ -2.06
UBX3YDL091C SWD2P36104 329 aaPredicted RBP2.16□□□□□ -2.06
UBX3YDL091C MRPL17P36528 281 aa2.16□□□□□ -2.06
UBX3YDL091C RFT1P38206 574 aaPredicted RBP2.16□□□□□ -2.06
UBX3YDL091C SUR2P38992 349 aa2.16□□□□□ -2.06
UBX3YDL091C FET3P38993 636 aa2.16□□□□□ -2.06
UBX3YDL091C PRM9P39551 298 aa2.16□□□□□ -2.06
UBX3YDL091C YER137CP40083 148 aaKnown RBP2.16□□□□□ -2.06
UBX3YDL091C YFH7P43591 353 aa2.16□□□□□ -2.06
UBX3YDL091C HAM1P47119 197 aaKnown RBP2.16□□□□□ -2.06
UBX3YDL091C CCC1P47818 322 aa2.16□□□□□ -2.06
UBX3YDL091C FMP48P53233 369 aa2.16□□□□□ -2.06
UBX3YDL091C ERV25P54837 211 aaKnown RBP2.16□□□□□ -2.06
UBX3YDL091C PRO2P54885 456 aaKnown RBP2.16□□□□□ -2.06
UBX3YDL091C YKR005CQ02203 525 aa2.16□□□□□ -2.06
UBX3YDL091C FAR8Q05040 523 aa2.16□□□□□ -2.06
UBX3YDL091C PBP4Q07362 185 aaKnown RBP2.16□□□□□ -2.06
UBX3YDL091C YPL225WQ08971 146 aaKnown RBP2.16□□□□□ -2.06
UBX3YDL091C AKR2Q12013 749 aa2.16□□□□□ -2.06
UBX3YDL091C YDR018CQ12185 396 aa2.16□□□□□ -2.06
UBX3YDL091C RTR2Q12378 196 aa2.16□□□□□ -2.06
UBX3YDL091C ERP3Q12403 225 aa2.16□□□□□ -2.06
UBX3YDL091C ADE6P38972 1358 aaKnown RBP2.16□□□□□ -2.06
UBX3YDL091C MET5P47169 1442 aa2.16□□□□□ -2.06
UBX3YDL091C NUP170P38181 1502 aa2.16□□□□□ -2.06
UBX3YDL091C SSK2P53599 1579 aa2.15□□□□□ -2.06
UBX3YDL091C IPP1P00817 287 aaKnown RBP2.15□□□□□ -2.07
UBX3YDL091C SPT3P06844 337 aa2.15□□□□□ -2.07
UBX3YDL091C MRPL20P22354 195 aaPredicted RBP2.15□□□□□ -2.07
UBX3YDL091C BUD23P25627 275 aaPredicted RBP2.15□□□□□ -2.07
UBX3YDL091C RPL16BP26785 198 aaKnown RBP2.15□□□□□ -2.07
UBX3YDL091C YBL010CP32788 280 aa2.15□□□□□ -2.07
UBX3YDL091C YHI9P38765 294 aa2.15□□□□□ -2.07
UBX3YDL091C EDC3P39998 551 aaKnown RBP2.15□□□□□ -2.07
UBX3YDL091C SOK1P40317 901 aa2.15□□□□□ -2.07
UBX3YDL091C LOC1P43586 204 aaPredicted RBP2.15□□□□□ -2.07
UBX3YDL091C PMT4P46971 762 aa2.15□□□□□ -2.07
UBX3YDL091C ILM1P47155 203 aa2.15□□□□□ -2.07
UBX3YDL091C RBL2P48606 106 aaKnown RBP2.15□□□□□ -2.07
UBX3YDL091C RIB4P50861 169 aaPredicted RBP2.15□□□□□ -2.07
UBX3YDL091C OKP1P53298 406 aa2.15□□□□□ -2.07
UBX3YDL091C INP1Q03694 420 aa2.15□□□□□ -2.07
UBX3YDL091C COX20Q04935 205 aa2.15□□□□□ -2.07
UBX3YDL091C STE23Q06010 1027 aa2.15□□□□□ -2.07
UBX3YDL091C RRG8Q06109 277 aa2.15□□□□□ -2.07
UBX3YDL091C BCP1Q06338 283 aa2.15□□□□□ -2.07
UBX3YDL091C DIB1Q06819 143 aaPredicted RBP2.15□□□□□ -2.07
UBX3YDL091C SNT2P53127 1403 aa2.15□□□□□ -2.07
UBX3YDL091C GAL7P08431 366 aa2.14□□□□□ -2.07
UBX3YDL091C SPS100P13130 326 aa2.14□□□□□ -2.07
UBX3YDL091C MRPL6P32904 214 aa2.14□□□□□ -2.07
UBX3YDL091C MSN4P33749 630 aa2.14□□□□□ -2.07
UBX3YDL091C BDH1P39714 382 aa2.14□□□□□ -2.07
UBX3YDL091C HSH155P49955 971 aaKnown RBP2.14□□□□□ -2.07
UBX3YDL091C YGL118CP53132 145 aa2.14□□□□□ -2.07
UBX3YDL091C SDS23P53172 527 aa2.14□□□□□ -2.07
UBX3YDL091C YGR042WP53227 271 aa2.14□□□□□ -2.07
UBX3YDL091C SSU72P53538 206 aaPredicted RBP2.14□□□□□ -2.07
UBX3YDL091C GMC1Q04399 608 aa2.14□□□□□ -2.07
UBX3YDL091C ARC18Q05933 178 aaKnown RBP2.14□□□□□ -2.07
UBX3YDL091C DXO1Q06349 442 aa2.14□□□□□ -2.07
UBX3YDL091C CUR1Q06469 252 aa2.14□□□□□ -2.07
UBX3YDL091C TY3A-GQ12173 290 aa2.14□□□□□ -2.07
UBX3YDL091C TY3A-IQ99219 290 aa2.14□□□□□ -2.07
UBX3YDL091C SEY1Q99287 776 aa2.14□□□□□ -2.07
UBX3YDL091C FLO11P08640 1367 aa2.14□□□□□ -2.07
UBX3YDL091C ATP6P00854 259 aa2.13□□□□□ -2.07
UBX3YDL091C RPL25P04456 142 aaKnown RBP2.13□□□□□ -2.07
UBX3YDL091C CDC36P06100 191 aaPredicted RBP2.13□□□□□ -2.07
UBX3YDL091C POL30P15873 258 aaKnown RBP2.13□□□□□ -2.07
UBX3YDL091C DAL81P21657 970 aa2.13□□□□□ -2.07
UBX3YDL091C CSM1P25651 190 aa2.13□□□□□ -2.07
UBX3YDL091C SOP4P39543 234 aaPredicted RBP2.13□□□□□ -2.07
UBX3YDL091C SEN34P39707 275 aa2.13□□□□□ -2.07
UBX3YDL091C HPM1P40481 377 aa2.13□□□□□ -2.07
UBX3YDL091C SLM1P40485 686 aa2.13□□□□□ -2.07
UBX3YDL091C YIL059CP40520 121 aa2.13□□□□□ -2.07
UBX3YDL091C YIA6P40556 373 aa2.13□□□□□ -2.07
UBX3YDL091C YIL001WP40560 513 aa2.13□□□□□ -2.07
UBX3YDL091C ASG7P46993 209 aa2.13□□□□□ -2.07
UBX3YDL091C SLX9P53251 210 aaPredicted RBP2.13□□□□□ -2.07
UBX3YDL091C DBP6P53734 629 aaKnown RBP2.13□□□□□ -2.07
UBX3YDL091C MNT4P53745 580 aa2.13□□□□□ -2.07
UBX3YDL091C MRPS17Q03246 237 aaPredicted RBP2.13□□□□□ -2.07
UBX3YDL091C GIM5Q04493 163 aa2.13□□□□□ -2.07
UBX3YDL091C DCR2Q05924 578 aa2.13□□□□□ -2.07
UBX3YDL091C KAP95Q06142 861 aaKnown RBP2.13□□□□□ -2.07
UBX3YDL091C GPN3Q06543 272 aa2.13□□□□□ -2.07
UBX3YDL091C YLR413WQ06689 675 aa2.13□□□□□ -2.07
UBX3YDL091C RRT8Q08219 342 aa2.13□□□□□ -2.07
UBX3YDL091C HRT1Q08273 121 aa2.13□□□□□ -2.07
UBX3YDL091C YDL211CQ12121 372 aa2.13□□□□□ -2.07
UBX3YDL091C MSH5Q12175 901 aa2.13□□□□□ -2.07
UBX3YDL091C BBP1Q12365 385 aa2.13□□□□□ -2.07
UBX3YDL091C SNU23Q12368 194 aaPredicted RBP2.13□□□□□ -2.07
UBX3YDL091C GIS3Q12418 502 aa2.13□□□□□ -2.07
Retrieved 100 of 5,963 RNA–protein pairs in 16.9 ms