RNA–Protein interactions for RNA: YDL080C

THI3, Transcript of Regulatory protein that binds Pdc2p and Thi2p transcription factors, yeast

Gene THI3, Length 1,830 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
THI3	YDL080C	YOL036W	Q08206	761 aa		7.38	□□□□□ -1.23
THI3	YDL080C	YRA1	Q12159	226 aa	Known RBP	7.38	□□□□□ -1.23
THI3	YDL080C	YOS9	Q99220	542 aa		7.38	□□□□□ -1.23
THI3	YDL080C	TDH2	P00358	332 aa	Known RBP	7.38	□□□□□ -1.23
THI3	YDL080C	STE50	P25344	346 aa		7.38	□□□□□ -1.23
THI3	YDL080C	MRP17	P28778	131 aa		7.38	□□□□□ -1.23
THI3	YDL080C	SRP102	P36057	244 aa	Predicted RBP	7.38	□□□□□ -1.23
THI3	YDL080C	SMB1	P40018	196 aa	Known RBP	7.38	□□□□□ -1.23
THI3	YDL080C	GPI14	P47088	403 aa	Known RBP	7.38	□□□□□ -1.23
THI3	YDL080C	YLR152C	P54072	576 aa		7.38	□□□□□ -1.23
THI3	YDL080C	CTF19	Q02732	369 aa		7.38	□□□□□ -1.23
THI3	YDL080C	ISU1	Q03020	165 aa		7.38	□□□□□ -1.23
THI3	YDL080C	ATP14	Q12349	124 aa		7.38	□□□□□ -1.23
THI3	YDL080C	NOP56	Q12460	504 aa	Known RBP RIP-Chip data	7.38	□□□□□ -1.23	not detected
THI3	YDL080C	SEF1	P34228	1148 aa		7.37	□□□□□ -1.23
THI3	YDL080C	PTI1	P39927	425 aa	Predicted RBP	7.37	□□□□□ -1.23
THI3	YDL080C	SER3	P40054	469 aa		7.37	□□□□□ -1.23
THI3	YDL080C	SYS1	P41544	203 aa		7.37	□□□□□ -1.23
THI3	YDL080C	POP6	P53218	158 aa		7.37	□□□□□ -1.23
THI3	YDL080C	RSM27	P53305	110 aa		7.37	□□□□□ -1.23
THI3	YDL080C	NAM8	Q00539	523 aa	Known RBP	7.37	□□□□□ -1.23
THI3	YDL080C	FRE7	Q12333	620 aa		7.37	□□□□□ -1.23
THI3	YDL080C	YIL046W-A	Q3E7Z4	54 aa		7.37	□□□□□ -1.23
THI3	YDL080C	PHO2	P07269	559 aa		7.36	□□□□□ -1.23
THI3	YDL080C	MATALPHA1	P0CY06	175 aa		7.36	□□□□□ -1.23
THI3	YDL080C	HMLALPHA1	P0CY07	175 aa		7.36	□□□□□ -1.23
THI3	YDL080C	MEK1	P24719	497 aa	Predicted RBP	7.36	□□□□□ -1.23
THI3	YDL080C	DBP2	P24783	546 aa	Known RBP	7.36	□□□□□ -1.23
THI3	YDL080C	PET18	P25362	215 aa		7.36	□□□□□ -1.23
THI3	YDL080C	MSS1	P32559	526 aa	Predicted RBP	7.36	□□□□□ -1.23
THI3	YDL080C	TAF14	P35189	244 aa		7.36	□□□□□ -1.23
THI3	YDL080C	SRY1	P36007	326 aa		7.36	□□□□□ -1.23
THI3	YDL080C	ALG3	P38179	458 aa		7.36	□□□□□ -1.23
THI3	YDL080C	NIT3	P49954	291 aa		7.36	□□□□□ -1.23
THI3	YDL080C	SLI1	P53304	468 aa		7.36	□□□□□ -1.23
THI3	YDL080C	CUZ1	P53899	274 aa		7.36	□□□□□ -1.23
THI3	YDL080C	KAP120	Q02932	1032 aa		7.36	□□□□□ -1.23
THI3	YDL080C	IRC19	Q07843	230 aa		7.36	□□□□□ -1.23
THI3	YDL080C	MIM1	Q08176	113 aa		7.36	□□□□□ -1.23
THI3	YDL080C	FEX1	Q08913	375 aa		7.36	□□□□□ -1.23
THI3	YDL080C	HMS1	Q12398	434 aa		7.36	□□□□□ -1.23
THI3	YDL080C	AIM17	P23180	465 aa	Known RBP	7.36	□□□□□ -1.23
THI3	YDL080C	KRR1	P25586	316 aa	Predicted RBP	7.36	□□□□□ -1.23
THI3	YDL080C	YCR061W	P25639	631 aa		7.36	□□□□□ -1.23
THI3	YDL080C	MKK2	P32491	506 aa		7.36	□□□□□ -1.23
THI3	YDL080C	NAT2	P37293	288 aa		7.36	□□□□□ -1.23
THI3	YDL080C	SSH1	P38353	490 aa	Known RBP	7.36	□□□□□ -1.23
THI3	YDL080C	YIL067C	P40514	678 aa		7.36	□□□□□ -1.23
THI3	YDL080C	RMD9	P53140	646 aa	Known RBP	7.36	□□□□□ -1.23
THI3	YDL080C	PDR16	P53860	351 aa	Known RBP	7.36	□□□□□ -1.23
THI3	YDL080C	LAP3	Q01532	483 aa	Known RBP RIP-Chip data	7.36	□□□□□ -1.23	not detected
THI3	YDL080C	YML108W	Q03759	105 aa		7.36	□□□□□ -1.23
THI3	YDL080C	YDL129W	Q07555	291 aa		7.36	□□□□□ -1.23
THI3	YDL080C	YOR385W	Q08909	290 aa		7.36	□□□□□ -1.23
THI3	YDL080C	HOM3	P10869	527 aa		7.35	□□□□□ -1.23
THI3	YDL080C	MAG1	P22134	296 aa	Known RBP	7.35	□□□□□ -1.23
THI3	YDL080C	SCO1	P23833	295 aa		7.35	□□□□□ -1.23
THI3	YDL080C	CWH43	P25618	953 aa		7.35	□□□□□ -1.23
THI3	YDL080C	PMT2	P31382	759 aa		7.35	□□□□□ -1.23
THI3	YDL080C	NAB2	P32505	525 aa	Known RBP RIP-Chip data	7.35	□□□□□ -1.23	not detected
THI3	YDL080C	AIM46	P38885	310 aa		7.35	□□□□□ -1.23
THI3	YDL080C	BUD8	P41698	603 aa		7.35	□□□□□ -1.23
THI3	YDL080C	YGR066C	P53242	292 aa		7.35	□□□□□ -1.23
THI3	YDL080C	OKP1	P53298	406 aa		7.35	□□□□□ -1.23
THI3	YDL080C	MTM1	P53320	366 aa		7.35	□□□□□ -1.23
THI3	YDL080C	NNT1	Q05874	261 aa		7.35	□□□□□ -1.23
THI3	YDL080C	YPR147C	Q06522	304 aa	Known RBP	7.35	□□□□□ -1.23
THI3	YDL080C	SYC1	Q08553	188 aa	Predicted RBP	7.35	□□□□□ -1.23
THI3	YDL080C	REX3	Q12090	404 aa		7.35	□□□□□ -1.23
THI3	YDL080C	TRM13	Q12383	476 aa		7.35	□□□□□ -1.23
THI3	YDL080C	GLT1	Q12680	2145 aa	Known RBP	7.34	□□□□□ -1.23
THI3	YDL080C	YBR085C-A	O43137	85 aa		7.34	□□□□□ -1.23
THI3	YDL080C	CHO1	P08456	276 aa		7.34	□□□□□ -1.23
THI3	YDL080C	PUT1	P09368	476 aa		7.34	□□□□□ -1.23
THI3	YDL080C	CTA1	P15202	515 aa		7.34	□□□□□ -1.23
THI3	YDL080C	SUA5	P32579	426 aa		7.34	□□□□□ -1.23
THI3	YDL080C	SNC2	P33328	115 aa		7.34	□□□□□ -1.23
THI3	YDL080C	OSH7	P38755	437 aa		7.34	□□□□□ -1.23
THI3	YDL080C	DLS1	P40366	167 aa		7.34	□□□□□ -1.23
THI3	YDL080C	AVT7	P40501	490 aa		7.34	□□□□□ -1.23
THI3	YDL080C	CIN2	P46670	268 aa		7.34	□□□□□ -1.23
THI3	YDL080C	BXI1	P48558	297 aa		7.34	□□□□□ -1.23
THI3	YDL080C	YGR126W	P53274	230 aa		7.34	□□□□□ -1.23
THI3	YDL080C	SCW4	P53334	386 aa	Known RBP	7.34	□□□□□ -1.23
THI3	YDL080C	APM1	Q00776	475 aa	Predicted RBP	7.34	□□□□□ -1.23
THI3	YDL080C	URA6	P15700	204 aa		7.34	□□□□□ -1.24
THI3	YDL080C	HXT2	P23585	541 aa		7.34	□□□□□ -1.24
THI3	YDL080C	PCL1	P24867	279 aa		7.34	□□□□□ -1.24
THI3	YDL080C	ADH7	P25377	361 aa		7.34	□□□□□ -1.24
THI3	YDL080C	MRP20	P32387	263 aa		7.34	□□□□□ -1.24
THI3	YDL080C	TAD2	P47058	250 aa		7.34	□□□□□ -1.24
THI3	YDL080C	RVB1	Q03940	463 aa	Known RBP	7.34	□□□□□ -1.24
THI3	YDL080C	CTS2	Q06350	511 aa		7.34	□□□□□ -1.24
THI3	YDL080C	YRM1	Q12340	786 aa		7.34	□□□□□ -1.24
THI3	YDL080C	SWM1	Q12379	170 aa		7.34	□□□□□ -1.24
THI3	YDL080C	PAR32	Q12515	295 aa	Known RBP	7.34	□□□□□ -1.24
THI3	YDL080C	HNM1	P19807	563 aa		7.33	□□□□□ -1.24
THI3	YDL080C	EHD3	P28817	500 aa		7.33	□□□□□ -1.24
THI3	YDL080C	COS9	P36034	407 aa		7.33	□□□□□ -1.24
THI3	YDL080C	PAN3	P36102	679 aa	Predicted RBP	7.33	□□□□□ -1.24

Retrieved 100 of 5,963 RNA–protein pairs in 50.9 ms