RNA–Protein interactions for RNA: YBR154C

RPB5, Transcript of RNA polymerase subunit ABC27, yeastyeast

Gene RPB5, Length 648 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPB5YBR154C PRS2P38620 318 aaKnown RBP1.68□□□□□ -2.14
RPB5YBR154C RPL10P41805 221 aaKnown RBP1.68□□□□□ -2.14
RPB5YBR154C YFL064CP43540 174 aa1.68□□□□□ -2.14
RPB5YBR154C LIF1P53150 421 aa1.68□□□□□ -2.14
RPB5YBR154C COG7P53195 279 aa1.68□□□□□ -2.14
RPB5YBR154C TIM21P53220 239 aa1.68□□□□□ -2.14
RPB5YBR154C MRPL50P53724 139 aa1.68□□□□□ -2.14
RPB5YBR154C CWC21Q03375 135 aaKnown RBP1.68□□□□□ -2.14
RPB5YBR154C INP1Q03694 420 aa1.68□□□□□ -2.14
RPB5YBR154C UTP15Q04305 513 aaKnown RBP1.68□□□□□ -2.14
RPB5YBR154C YLR283WQ05867 314 aa1.68□□□□□ -2.14
RPB5YBR154C SEC10Q06245 871 aa1.68□□□□□ -2.14
RPB5YBR154C PAM18Q07914 168 aa1.68□□□□□ -2.14
RPB5YBR154C RLP24Q07915 199 aaKnown RBP1.68□□□□□ -2.14
RPB5YBR154C YOL029CQ08187 201 aa1.68□□□□□ -2.14
RPB5YBR154C MSH5Q12175 901 aa1.68□□□□□ -2.14
RPB5YBR154C YOR029WQ12243 111 aa1.68□□□□□ -2.14
RPB5YBR154C DFM1Q12743 341 aaKnown RBP1.68□□□□□ -2.14
RPB5YBR154C YOS9Q99220 542 aa1.68□□□□□ -2.14
RPB5YBR154C NTG1P31378 399 aa1.67□□□□□ -2.14
RPB5YBR154C ZRT3P34240 503 aa1.67□□□□□ -2.14
RPB5YBR154C MRPL3P36516 390 aa1.67□□□□□ -2.14
RPB5YBR154C ATG12P38316 186 aa1.67□□□□□ -2.14
RPB5YBR154C BFR1P38934 470 aaKnown RBP RIP-Chip data1.67□□□□□ -2.14not detected
RPB5YBR154C KRE29P40026 464 aa1.67□□□□□ -2.14
RPB5YBR154C YER085CP40058 173 aa1.67□□□□□ -2.14
RPB5YBR154C YIL054WP40524 105 aa1.67□□□□□ -2.14
RPB5YBR154C YJR012CP47087 207 aa1.67□□□□□ -2.14
RPB5YBR154C MAL13P53338 473 aa1.67□□□□□ -2.14
RPB5YBR154C SWS2P53937 143 aa1.67□□□□□ -2.14
RPB5YBR154C YMR244WQ04018 355 aa1.67□□□□□ -2.14
RPB5YBR154C KRE28Q04431 385 aa1.67□□□□□ -2.14
RPB5YBR154C DIB1Q06819 143 aaPredicted RBP1.67□□□□□ -2.14
RPB5YBR154C CSM4Q08955 156 aa1.67□□□□□ -2.14
RPB5YBR154C YPL278CQ08990 100 aa1.67□□□□□ -2.14
RPB5YBR154C FLO11P08640 1367 aa1.67□□□□□ -2.14
RPB5YBR154C YMR316C-AI2HB70 103 aa1.66□□□□□ -2.14
RPB5YBR154C TDH2P00358 332 aaKnown RBP1.66□□□□□ -2.14
RPB5YBR154C CDC42P19073 191 aa1.66□□□□□ -2.14
RPB5YBR154C RNA15P25299 296 aaPredicted RBP1.66□□□□□ -2.14
RPB5YBR154C YCR025CP25352 136 aa1.66□□□□□ -2.14
RPB5YBR154C ATG15P25641 520 aa1.66□□□□□ -2.14
RPB5YBR154C IMP1P28627 190 aa1.66□□□□□ -2.14
RPB5YBR154C KRE6P32486 720 aa1.66□□□□□ -2.14
RPB5YBR154C SRB4P32569 687 aa1.66□□□□□ -2.14
RPB5YBR154C MSN4P33749 630 aa1.66□□□□□ -2.14
RPB5YBR154C BMH2P34730 273 aaKnown RBP1.66□□□□□ -2.14
RPB5YBR154C TCD1P38756 429 aa1.66□□□□□ -2.14
RPB5YBR154C ASP1P38986 381 aaPredicted RBP1.66□□□□□ -2.14
RPB5YBR154C SEN34P39707 275 aa1.66□□□□□ -2.14
RPB5YBR154C BDH1P39714 382 aa1.66□□□□□ -2.14
RPB5YBR154C RTR1P40084 226 aaPredicted RBP1.66□□□□□ -2.14
RPB5YBR154C AVT7P40501 490 aa1.66□□□□□ -2.14
RPB5YBR154C SER33P40510 469 aa1.66□□□□□ -2.14
RPB5YBR154C DSN1P40568 576 aa1.66□□□□□ -2.14
RPB5YBR154C GLG2P47011 380 aa1.66□□□□□ -2.14
RPB5YBR154C PRP24P49960 444 aaKnown RBP1.66□□□□□ -2.14
RPB5YBR154C NBP1P52919 319 aaPredicted RBP1.66□□□□□ -2.14
RPB5YBR154C NBP35P52920 328 aa1.66□□□□□ -2.14
RPB5YBR154C ACT1P60010 375 aaKnown RBP1.66□□□□□ -2.14
RPB5YBR154C YPL113CQ02961 396 aa1.66□□□□□ -2.14
RPB5YBR154C SDC1Q03323 175 aa1.66□□□□□ -2.14
RPB5YBR154C YDR209CQ03480 137 aa1.66□□□□□ -2.14
RPB5YBR154C ARC18Q05933 178 aaKnown RBP1.66□□□□□ -2.14
RPB5YBR154C ECM19Q06011 112 aa1.66□□□□□ -2.14
RPB5YBR154C LOA1Q06508 300 aa1.66□□□□□ -2.14
RPB5YBR154C YDL144CQ07589 356 aa1.66□□□□□ -2.14
RPB5YBR154C STH1P32597 1359 aa1.66□□□□□ -2.14
RPB5YBR154C CFT1Q06632 1357 aaKnown RBP1.66□□□□□ -2.14
RPB5YBR154C RPL4AP10664 362 aaKnown RBP1.65□□□□□ -2.15
RPB5YBR154C OSM1P21375 501 aaKnown RBP1.65□□□□□ -2.15
RPB5YBR154C VPS3P23643 1011 aa1.65□□□□□ -2.15
RPB5YBR154C RPS5P26783 225 aaKnown RBP1.65□□□□□ -2.15
RPB5YBR154C CAM1P29547 415 aaKnown RBP1.65□□□□□ -2.15
RPB5YBR154C QRI5P32344 111 aa1.65□□□□□ -2.15
RPB5YBR154C SMB1P40018 196 aaKnown RBP1.65□□□□□ -2.15
RPB5YBR154C EDC2P40023 145 aaPredicted RBP1.65□□□□□ -2.15
RPB5YBR154C YIL012WP40551 113 aa1.65□□□□□ -2.15
RPB5YBR154C OTU1P43558 301 aa1.65□□□□□ -2.15
RPB5YBR154C RPL4BP49626 362 aaKnown RBP1.65□□□□□ -2.15
RPB5YBR154C YGL118CP53132 145 aa1.65□□□□□ -2.15
RPB5YBR154C MRS2Q01926 470 aa1.65□□□□□ -2.15
RPB5YBR154C EBS1Q03466 884 aaKnown RBP1.65□□□□□ -2.15
RPB5YBR154C MYO5Q04439 1219 aaKnown RBP1.65□□□□□ -2.15
RPB5YBR154C SGT2Q12118 346 aaKnown RBP1.65□□□□□ -2.15
RPB5YBR154C YDL211CQ12121 372 aa1.65□□□□□ -2.15
RPB5YBR154C SNF8Q12483 233 aa1.65□□□□□ -2.15
RPB5YBR154C YAL063C-AQ3E791 96 aa1.65□□□□□ -2.15
RPB5YBR154C AI5_BETAQ9ZZX0 354 aa1.65□□□□□ -2.15
RPB5YBR154C MATALPHA1P0CY06 175 aa1.64□□□□□ -2.15
RPB5YBR154C HMLALPHA1P0CY07 175 aa1.64□□□□□ -2.15
RPB5YBR154C CUP2P15315 225 aa1.64□□□□□ -2.15
RPB5YBR154C PHO80P20052 293 aa1.64□□□□□ -2.15
RPB5YBR154C RPB4P20433 221 aaPredicted RBP1.64□□□□□ -2.15
RPB5YBR154C RPO26P20435 155 aa1.64□□□□□ -2.15
RPB5YBR154C COX10P21592 462 aa1.64□□□□□ -2.15
RPB5YBR154C RPB9P27999 122 aa1.64□□□□□ -2.15
RPB5YBR154C HOM6P31116 359 aaKnown RBP1.64□□□□□ -2.15
RPB5YBR154C CAT2P32796 670 aaKnown RBP1.64□□□□□ -2.15
RPB5YBR154C TKL2P33315 681 aa1.64□□□□□ -2.15
Retrieved 100 of 5,963 RNA–protein pairs in 26.5 ms