RNA–Protein interactions for RNA: ENST00000638133.1

PPFIA1-225, Transcript of PTPRF interacting protein alpha 1, humanhuman

TSL 3

Gene PPFIA1, Length 814 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA1-225ENST00000638133 TXLNAP40222 546 aa16.4■□□□□ 0.22
PPFIA1-225ENST00000638133 AFF1P51825 1210 aaKnown RBP16.4■□□□□ 0.22
PPFIA1-225ENST00000638133 GRIK3Q13003 919 aa16.4■□□□□ 0.22
PPFIA1-225ENST00000638133 STRN3Q13033 797 aa16.4■□□□□ 0.22
PPFIA1-225ENST00000638133 RESTQ13127 1097 aa16.4■□□□□ 0.22
PPFIA1-225ENST00000638133 SMAD4Q13485 552 aaKnown RBP16.4■□□□□ 0.22
PPFIA1-225ENST00000638133 DHX8Q14562 1220 aaKnown RBP16.4■□□□□ 0.22
PPFIA1-225ENST00000638133 TMEM119Q4V9L6 283 aa16.4■□□□□ 0.22
PPFIA1-225ENST00000638133 TMEM173Q86WV6 379 aaPredicted RBP16.4■□□□□ 0.22
PPFIA1-225ENST00000638133 MRPL43Q8N983 215 aaKnown RBP16.4■□□□□ 0.22
PPFIA1-225ENST00000638133 SNTG2Q9NY99 539 aa16.4■□□□□ 0.22
PPFIA1-225ENST00000638133 CCDC39Q9UFE4 941 aa16.4■□□□□ 0.22
PPFIA1-225ENST00000638133 BARX2Q9UMQ3 279 aaPredicted RBP16.4■□□□□ 0.22
PPFIA1-225ENST00000638133 PRG3Q9Y2Y8 225 aaPredicted RBP16.4■□□□□ 0.22
PPFIA1-225ENST00000638133 BRWD1Q9NSI6 2320 aa16.4■□□□□ 0.22
PPFIA1-225ENST00000638133 ZMYM2Q9UBW7 1377 aa16.39■□□□□ 0.21
PPFIA1-225ENST00000638133 CUL9Q8IWT3 2517 aa16.39■□□□□ 0.21
PPFIA1-225ENST00000638133 C2orf71A6NGG8 1288 aa16.39■□□□□ 0.21
PPFIA1-225ENST00000638133 SFI1A8K8P3 1242 aa16.39■□□□□ 0.21
PPFIA1-225ENST00000638133 INPPL1O15357 1258 aa16.39■□□□□ 0.21
PPFIA1-225ENST00000638133 MARCKSP29966 332 aaPredicted RBP16.39■□□□□ 0.21
PPFIA1-225ENST00000638133 KARSQ15046 597 aaKnown RBP16.39■□□□□ 0.21
PPFIA1-225ENST00000638133 TCHPQ9BT92 498 aa16.39■□□□□ 0.21
PPFIA1-225ENST00000638133 COLEC11Q9BWP8 271 aa16.39■□□□□ 0.21
PPFIA1-225ENST00000638133 MRPL4Q9BYD3 311 aaKnown RBP16.39■□□□□ 0.21
PPFIA1-225ENST00000638133 ZBP1Q9H171 429 aa16.39■□□□□ 0.21
PPFIA1-225ENST00000638133 TMEM134Q9H6X4 195 aa16.39■□□□□ 0.21
PPFIA1-225ENST00000638133 LARSQ9P2J5 1176 aaKnown RBP16.39■□□□□ 0.21
PPFIA1-225ENST00000638133 PRKAG3Q9UGI9 489 aa16.39■□□□□ 0.21
PPFIA1-225ENST00000638133 MTMR6Q9Y217 621 aa16.39■□□□□ 0.21
PPFIA1-225ENST00000638133 USP20Q9Y2K6 914 aa16.39■□□□□ 0.21
PPFIA1-225ENST00000638133 MYH11P35749 1972 aa16.38■□□□□ 0.21
PPFIA1-225ENST00000638133 TTLL13PA6NNM8 815 aa16.38■□□□□ 0.21
PPFIA1-225ENST00000638133 H0YCG3 227 aa16.38■□□□□ 0.21
PPFIA1-225ENST00000638133 SLC16A4O15374 487 aa16.38■□□□□ 0.21
PPFIA1-225ENST00000638133 MBTPS2O43462 519 aa16.38■□□□□ 0.21
PPFIA1-225ENST00000638133 CTSAP10619 480 aa16.38■□□□□ 0.21
PPFIA1-225ENST00000638133 PDIA4P13667 645 aaKnown RBP16.38■□□□□ 0.21
PPFIA1-225ENST00000638133 PLS3P13797 630 aa16.38■□□□□ 0.21
PPFIA1-225ENST00000638133 SLC12A3P55017 1021 aa16.38■□□□□ 0.21
PPFIA1-225ENST00000638133 COASYQ13057 564 aa16.38■□□□□ 0.21
PPFIA1-225ENST00000638133 FAM173BQ6P4H8 233 aa16.38■□□□□ 0.21
PPFIA1-225ENST00000638133 GPBP1Q86WP2 473 aa16.38■□□□□ 0.21
PPFIA1-225ENST00000638133 FAM178BQ8IXR5 827 aa16.38■□□□□ 0.21
PPFIA1-225ENST00000638133 COLGALT2Q8IYK4 626 aa16.38■□□□□ 0.21
PPFIA1-225ENST00000638133 DAW1Q8N136 415 aa16.38■□□□□ 0.21
PPFIA1-225ENST00000638133 CASP10Q92851 521 aa16.38■□□□□ 0.21
PPFIA1-225ENST00000638133 POP1Q99575 1024 aaKnown RBP16.38■□□□□ 0.21
PPFIA1-225ENST00000638133 EMILIN2Q9BXX0 1053 aa16.38■□□□□ 0.21
PPFIA1-225ENST00000638133 MIOSQ9NXC5 875 aa16.38■□□□□ 0.21
PPFIA1-225ENST00000638133 CLEC1BQ9P126 229 aa16.38■□□□□ 0.21
PPFIA1-225ENST00000638133 SSX2IPQ9Y2D8 614 aa16.38■□□□□ 0.21
PPFIA1-225ENST00000638133 GDAQ9Y2T3 454 aa16.38■□□□□ 0.21
PPFIA1-225ENST00000638133 SPDYE4A6NLX3 237 aa16.37■□□□□ 0.21
PPFIA1-225ENST00000638133 B4GALT3O60512 393 aa16.37■□□□□ 0.21
PPFIA1-225ENST00000638133 RECQL4O94761 1208 aa16.37■□□□□ 0.21
PPFIA1-225ENST00000638133 FAM13AO94988 1023 aa16.37■□□□□ 0.21
PPFIA1-225ENST00000638133 GLP2RO95838 553 aa16.37■□□□□ 0.21
PPFIA1-225ENST00000638133 URODP06132 367 aa16.37■□□□□ 0.21
PPFIA1-225ENST00000638133 THP07101 528 aa16.37■□□□□ 0.21
PPFIA1-225ENST00000638133 PLCG1P19174 1290 aa16.37■□□□□ 0.21
PPFIA1-225ENST00000638133 YARSP54577 528 aaKnown RBP16.37■□□□□ 0.21
PPFIA1-225ENST00000638133 SMAD2Q15796 467 aaKnown RBP16.37■□□□□ 0.21
PPFIA1-225ENST00000638133 ZNF568Q3ZCX4 644 aa16.37■□□□□ 0.21
PPFIA1-225ENST00000638133 NT5DC1Q5TFE4 455 aa16.37■□□□□ 0.21
PPFIA1-225ENST00000638133 EEF1DP3Q658K8 133 aa16.37■□□□□ 0.21
PPFIA1-225ENST00000638133 KIAA1841Q6NSI8 718 aa16.37■□□□□ 0.21
PPFIA1-225ENST00000638133 GJD3Q8N144 294 aa16.37■□□□□ 0.21
PPFIA1-225ENST00000638133 BCL7CQ8WUZ0 217 aaPredicted RBP16.37■□□□□ 0.21
PPFIA1-225ENST00000638133 SPIRE2Q8WWL2 714 aa16.37■□□□□ 0.21
PPFIA1-225ENST00000638133 AUTS2Q8WXX7 1259 aa16.37■□□□□ 0.21
PPFIA1-225ENST00000638133 MSLNLQ96KJ4 702 aa16.37■□□□□ 0.21
PPFIA1-225ENST00000638133 ZNF396Q96N95 335 aaPredicted RBP16.37■□□□□ 0.21
PPFIA1-225ENST00000638133 ZHX3Q9H4I2 956 aa16.37■□□□□ 0.21
PPFIA1-225ENST00000638133 MRPL17Q9NRX2 175 aaKnown RBP16.37■□□□□ 0.21
PPFIA1-225ENST00000638133 ARHGAP28Q9P2N2 729 aa16.37■□□□□ 0.21
PPFIA1-225ENST00000638133 ODF2LQ9ULJ1 636 aa16.37■□□□□ 0.21
PPFIA1-225ENST00000638133 TNFSF13BQ9Y275 285 aa16.37■□□□□ 0.21
PPFIA1-225ENST00000638133 NPHP3-ACAD11A0A0J9YXS1 232 aa16.36■□□□□ 0.21
PPFIA1-225ENST00000638133 TBCAO75347 108 aaKnown RBP16.36■□□□□ 0.21
PPFIA1-225ENST00000638133 TADA2AO75478 443 aa16.36■□□□□ 0.21
PPFIA1-225ENST00000638133 EDN1P05305 212 aa16.36■□□□□ 0.21
PPFIA1-225ENST00000638133 MATR3P43243 847 aaKnown RBP eCLIP16.36■□□□□ 0.213e-7■■□□□ 14.3
PPFIA1-225ENST00000638133 RBM10P98175 930 aaKnown RBP16.36■□□□□ 0.21
PPFIA1-225ENST00000638133 CACNB1Q02641 598 aaPredicted RBP16.36■□□□□ 0.21
PPFIA1-225ENST00000638133 GRIN1Q05586 938 aa16.36■□□□□ 0.21
PPFIA1-225ENST00000638133 DSC1Q08554 894 aa16.36■□□□□ 0.21
PPFIA1-225ENST00000638133 MAPK7Q13164 816 aa16.36■□□□□ 0.21
PPFIA1-225ENST00000638133 STK38Q15208 465 aa16.36■□□□□ 0.21
PPFIA1-225ENST00000638133 PTPAQ15257 358 aa16.36■□□□□ 0.21
PPFIA1-225ENST00000638133 SPECC1Q5M775 1068 aa16.36■□□□□ 0.21
PPFIA1-225ENST00000638133 TMEM184AQ6ZMB5 413 aa16.36■□□□□ 0.21
PPFIA1-225ENST00000638133 ZBTB33Q86T24 672 aa16.36■□□□□ 0.21
PPFIA1-225ENST00000638133 PPFIBP1Q86W92 1011 aa16.36■□□□□ 0.21
PPFIA1-225ENST00000638133 ADHFE1Q8IWW8 467 aa16.36■□□□□ 0.21
PPFIA1-225ENST00000638133 MYCT1Q8N699 235 aa16.36■□□□□ 0.21
PPFIA1-225ENST00000638133 SMRP1Q8NCR6 262 aa16.36■□□□□ 0.21
PPFIA1-225ENST00000638133 LARP4BQ92615 738 aaKnown RBP16.36■□□□□ 0.21
PPFIA1-225ENST00000638133 RAD54LQ92698 747 aa16.36■□□□□ 0.21
PPFIA1-225ENST00000638133 BICD1Q96G01 975 aa16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms