RNA–Protein interactions for RNA: ENST00000637223.1

CLN6-218, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 652 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-218ENST00000637223 DGKIO75912 1065 aa18.85■□□□□ 0.61
CLN6-218ENST00000637223 EOMESO95936 686 aa18.85■□□□□ 0.61
CLN6-218ENST00000637223 HARSP12081 509 aaKnown RBP18.85■□□□□ 0.61
CLN6-218ENST00000637223 ABCD1P33897 745 aa18.85■□□□□ 0.61
CLN6-218ENST00000637223 LIG4P49917 911 aa18.85■□□□□ 0.61
CLN6-218ENST00000637223 HTRA4P83105 476 aaPredicted RBP18.85■□□□□ 0.61
CLN6-218ENST00000637223 RAB30Q15771 203 aa18.85■□□□□ 0.61
CLN6-218ENST00000637223 ZNF568Q3ZCX4 644 aa18.85■□□□□ 0.61
CLN6-218ENST00000637223 PAN2Q504Q3 1202 aaKnown RBP18.85■□□□□ 0.61
CLN6-218ENST00000637223 L1TD1Q5T7N2 865 aaKnown RBP18.85■□□□□ 0.61
CLN6-218ENST00000637223 ZPBP2Q6X784 338 aa18.85■□□□□ 0.61
CLN6-218ENST00000637223 TIFAQ96CG3 184 aa18.85■□□□□ 0.61
CLN6-218ENST00000637223 HVCN1Q96D96 273 aa18.85■□□□□ 0.61
CLN6-218ENST00000637223 ACCSQ96QU6 501 aa18.85■□□□□ 0.61
CLN6-218ENST00000637223 TCHPQ9BT92 498 aa18.85■□□□□ 0.61
CLN6-218ENST00000637223 CDT1Q9H211 546 aa18.85■□□□□ 0.61
CLN6-218ENST00000637223 RNF39Q9H2S5 420 aa18.85■□□□□ 0.61
CLN6-218ENST00000637223 NKX2-4Q9H2Z4 354 aa18.85■□□□□ 0.61
CLN6-218ENST00000637223 RNF19AQ9NV58 838 aa18.85■□□□□ 0.61
CLN6-218ENST00000637223 RNF216Q9NWF9 866 aaPredicted RBP18.85■□□□□ 0.61
CLN6-218ENST00000637223 MSRAQ9UJ68 235 aa18.85■□□□□ 0.61
CLN6-218ENST00000637223 HOOK1Q9UJC3 728 aaKnown RBP18.85■□□□□ 0.61
CLN6-218ENST00000637223 PCDHA11Q9Y5I1 949 aa18.85■□□□□ 0.61
CLN6-218ENST00000637223 TOM1L1O75674 476 aa18.84■□□□□ 0.61
CLN6-218ENST00000637223 CA3P07451 260 aa18.84■□□□□ 0.61
CLN6-218ENST00000637223 MATR3P43243 847 aaKnown RBP eCLIP18.84■□□□□ 0.61
CLN6-218ENST00000637223 ALCAMQ13740 583 aa18.84■□□□□ 0.61
CLN6-218ENST00000637223 DCAF4L1Q3SXM0 396 aa18.84■□□□□ 0.61
CLN6-218ENST00000637223 MPZL3Q6UWV2 235 aa18.84■□□□□ 0.61
CLN6-218ENST00000637223 STXBP4Q6ZWJ1 553 aa18.84■□□□□ 0.61
CLN6-218ENST00000637223 MRPL10Q7Z7H8 261 aaKnown RBP18.84■□□□□ 0.61
CLN6-218ENST00000637223 HELQQ8TDG4 1101 aa18.84■□□□□ 0.61
CLN6-218ENST00000637223 CCDC47Q96A33 483 aaKnown RBP18.84■□□□□ 0.61
CLN6-218ENST00000637223 PGBD4Q96DM1 585 aa18.84■□□□□ 0.61
CLN6-218ENST00000637223 GAS2L1Q99501 681 aaPredicted RBP18.84■□□□□ 0.61
CLN6-218ENST00000637223 PTPRHQ9HD43 1115 aa18.84■□□□□ 0.61
CLN6-218ENST00000637223 THEGQ9P2T0 379 aa18.84■□□□□ 0.61
CLN6-218ENST00000637223 INSL6Q9Y581 213 aa18.84■□□□□ 0.61
CLN6-218ENST00000637223 TBKBP1A7MCY6 615 aa18.83■□□□□ 0.6
CLN6-218ENST00000637223 TISP43B9A030 160 aa18.83■□□□□ 0.6
CLN6-218ENST00000637223 ANKRD63C9JTQ0 380 aa18.83■□□□□ 0.6
CLN6-218ENST00000637223 ABLIM1O14639 778 aa18.83■□□□□ 0.6
CLN6-218ENST00000637223 ARHGEF15O94989 841 aa18.83■□□□□ 0.6
CLN6-218ENST00000637223 PIGRP01833 764 aa18.83■□□□□ 0.6
CLN6-218ENST00000637223 ITGA4P13612 1032 aa18.83■□□□□ 0.6
CLN6-218ENST00000637223 PROZP22891 400 aa18.83■□□□□ 0.6
CLN6-218ENST00000637223 STK4Q13043 487 aa18.83■□□□□ 0.6
CLN6-218ENST00000637223 CLLU1OSQ5K130 101 aa18.83■□□□□ 0.6
CLN6-218ENST00000637223 SLC39A4Q6P5W5 647 aa18.83■□□□□ 0.6
CLN6-218ENST00000637223 AGMOQ6ZNB7 445 aa18.83■□□□□ 0.6
CLN6-218ENST00000637223 EPM2AIP1Q7L775 607 aaPredicted RBP18.83■□□□□ 0.6
CLN6-218ENST00000637223 SYCP3Q8IZU3 236 aa18.83■□□□□ 0.6
CLN6-218ENST00000637223 ZNF689Q96CS4 500 aaPredicted RBP18.83■□□□□ 0.6
CLN6-218ENST00000637223 UHRF1Q96T88 793 aaPredicted RBP18.83■□□□□ 0.6
CLN6-218ENST00000637223 RC3H2Q9HBD1 1191 aaKnown RBP18.83■□□□□ 0.6
CLN6-218ENST00000637223 SNTG2Q9NY99 539 aa18.83■□□□□ 0.6
CLN6-218ENST00000637223 EXOC7Q9UPT5 735 aa18.83■□□□□ 0.6
CLN6-218ENST00000637223 PTPRSQ13332 1948 aa18.82■□□□□ 0.6
CLN6-218ENST00000637223 CLDN3O15551 220 aa18.82■□□□□ 0.6
CLN6-218ENST00000637223 HOXA2O43364 376 aa18.82■□□□□ 0.6
CLN6-218ENST00000637223 RHOBTB3O94955 611 aa18.82■□□□□ 0.6
CLN6-218ENST00000637223 SMC2O95347 1197 aa18.82■□□□□ 0.6
CLN6-218ENST00000637223 AKAP5P24588 427 aa18.82■□□□□ 0.6
CLN6-218ENST00000637223 MRPS5P82675 430 aaKnown RBP18.82■□□□□ 0.6
CLN6-218ENST00000637223 PSMD2Q13200 908 aa18.82■□□□□ 0.6
CLN6-218ENST00000637223 BTG3Q14201 252 aaPredicted RBP18.82■□□□□ 0.6
CLN6-218ENST00000637223 CAMK4Q16566 473 aa18.82■□□□□ 0.6
CLN6-218ENST00000637223 APBB1IPQ7Z5R6 666 aaPredicted RBP18.82■□□□□ 0.6
CLN6-218ENST00000637223 NELFCDQ8IXH7 590 aa18.82■□□□□ 0.6
CLN6-218ENST00000637223 ELOA2Q8IYF1 753 aaPredicted RBP18.82■□□□□ 0.6
CLN6-218ENST00000637223 HACE1Q8IYU2 909 aa18.82■□□□□ 0.6
CLN6-218ENST00000637223 ABI1Q8IZP0 508 aa18.82■□□□□ 0.6
CLN6-218ENST00000637223 CEP120Q8N960 986 aa18.82■□□□□ 0.6
CLN6-218ENST00000637223 KIAA0895Q8NCT3 520 aa18.82■□□□□ 0.6
CLN6-218ENST00000637223 SCFD1Q8WVM8 642 aa18.82■□□□□ 0.6
CLN6-218ENST00000637223 SMARCE1Q969G3 411 aa18.82■□□□□ 0.6
CLN6-218ENST00000637223 HAPLN2Q9GZV7 340 aa18.82■□□□□ 0.6
CLN6-218ENST00000637223 RSAD1Q9HA92 442 aa18.82■□□□□ 0.6
CLN6-218ENST00000637223 PARP2Q9UGN5 583 aa18.82■□□□□ 0.6
CLN6-218ENST00000637223 INPP5FQ9Y2H2 1132 aa18.82■□□□□ 0.6
CLN6-218ENST00000637223 GDAQ9Y2T3 454 aa18.82■□□□□ 0.6
CLN6-218ENST00000637223 PCDHA5Q9Y5H7 936 aa18.82■□□□□ 0.6
CLN6-218ENST00000637223 EIF3DO15371 548 aaKnown RBP eCLIP18.81■□□□□ 0.6
CLN6-218ENST00000637223 MCF2P10911 925 aa18.81■□□□□ 0.6
CLN6-218ENST00000637223 HOXD11P31277 338 aaPredicted RBP18.81■□□□□ 0.6
CLN6-218ENST00000637223 HOXD13P35453 343 aa18.81■□□□□ 0.6
CLN6-218ENST00000637223 OSTNP61366 133 aa18.81■□□□□ 0.6
CLN6-218ENST00000637223 MCL1Q07820 350 aa18.81■□□□□ 0.6
CLN6-218ENST00000637223 KCNB1Q14721 858 aa18.81■□□□□ 0.6
CLN6-218ENST00000637223 NOLC1Q14978 699 aaKnown RBP eCLIP18.81■□□□□ 0.6
CLN6-218ENST00000637223 CCDC85BQ15834 202 aaPredicted RBP18.81■□□□□ 0.6
CLN6-218ENST00000637223 SEZ6Q53EL9 994 aa18.81■□□□□ 0.6
CLN6-218ENST00000637223 GLB1LQ6UWU2 654 aa18.81■□□□□ 0.6
CLN6-218ENST00000637223 THNSL1Q8IYQ7 743 aa18.81■□□□□ 0.6
CLN6-218ENST00000637223 ZNF507Q8TCN5 953 aa18.81■□□□□ 0.6
CLN6-218ENST00000637223 GPT2Q8TD30 523 aa18.81■□□□□ 0.6
CLN6-218ENST00000637223 SP7Q8TDD2 431 aaPredicted RBP18.81■□□□□ 0.6
CLN6-218ENST00000637223 CASD1Q96PB1 797 aa18.81■□□□□ 0.6
CLN6-218ENST00000637223 TMEM117Q9H0C3 514 aa18.81■□□□□ 0.6
CLN6-218ENST00000637223 PRDM12Q9H4Q4 367 aa18.81■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms