RNA–Protein interactions for RNA: ENST00000624720.1

USB1-216, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

Gene USB1, Length 2,895 nt, Biotype TEC, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-216ENST00000624720 AVENQ9NQS1 362 aaPredicted RBP9.81□□□□□ -0.84
USB1-216ENST00000624720 PANK4Q9NVE7 773 aa9.81□□□□□ -0.84
USB1-216ENST00000624720 AGAP1Q9UPQ3 857 aa9.81□□□□□ -0.84
USB1-216ENST00000624720 LRRC42Q9Y546 428 aa9.81□□□□□ -0.84
USB1-216ENST00000624720 MAGEB6P1A0A0J9YX57 407 aa9.81□□□□□ -0.84
USB1-216ENST00000624720 H3BQV1 296 aa9.81□□□□□ -0.84
USB1-216ENST00000624720 NDC80O14777 642 aa9.81□□□□□ -0.84
USB1-216ENST00000624720 MAGEB3O15480 346 aa9.81□□□□□ -0.84
USB1-216ENST00000624720 YKT6O15498 198 aa9.81□□□□□ -0.84
USB1-216ENST00000624720 RANBP6O60518 1105 aaKnown RBP9.81□□□□□ -0.84
USB1-216ENST00000624720 PDE5AO76074 875 aa9.81□□□□□ -0.84
USB1-216ENST00000624720 EPN2O95208 641 aa9.81□□□□□ -0.84
USB1-216ENST00000624720 SLC4A1P02730 911 aa9.81□□□□□ -0.84
USB1-216ENST00000624720 FYNP06241 537 aa9.81□□□□□ -0.84
USB1-216ENST00000624720 SRGNP10124 158 aa9.81□□□□□ -0.84
USB1-216ENST00000624720 ALADP13716 330 aa9.81□□□□□ -0.84
USB1-216ENST00000624720 NAGAP17050 411 aa9.81□□□□□ -0.84
USB1-216ENST00000624720 SCNN1DP51172 638 aa9.81□□□□□ -0.84
USB1-216ENST00000624720 PRKCEQ02156 737 aa9.81□□□□□ -0.84
USB1-216ENST00000624720 CUL4AQ13619 759 aa9.81□□□□□ -0.84
USB1-216ENST00000624720 TCEAL1Q15170 157 aa9.81□□□□□ -0.84
USB1-216ENST00000624720 SPRED3Q2MJR0 410 aa9.81□□□□□ -0.84
USB1-216ENST00000624720 NDUFAF5Q5TEU4 345 aa9.81□□□□□ -0.84
USB1-216ENST00000624720 IFFO2Q5TF58 517 aa9.81□□□□□ -0.84
USB1-216ENST00000624720 RTL10Q7L3V2 364 aa9.81□□□□□ -0.84
USB1-216ENST00000624720 METTL3Q86U44 580 aaKnown RBP9.81□□□□□ -0.84
USB1-216ENST00000624720 BBOF1Q8ND07 529 aa9.81□□□□□ -0.84
USB1-216ENST00000624720 PHKBQ93100 1093 aa9.81□□□□□ -0.84
USB1-216ENST00000624720 ITPKCQ96DU7 683 aa9.81□□□□□ -0.84
USB1-216ENST00000624720 CEP95Q96GE4 821 aa9.81□□□□□ -0.84
USB1-216ENST00000624720 CCT8L2Q96SF2 557 aa9.81□□□□□ -0.84
USB1-216ENST00000624720 DSCC1Q9BVC3 393 aa9.81□□□□□ -0.84
USB1-216ENST00000624720 SHCBP1LQ9BZQ2 653 aa9.81□□□□□ -0.84
USB1-216ENST00000624720 NDST4Q9H3R1 872 aa9.81□□□□□ -0.84
USB1-216ENST00000624720 DBNDD1Q9H9R9 158 aa9.81□□□□□ -0.84
USB1-216ENST00000624720 STK32BQ9NY57 414 aa9.81□□□□□ -0.84
USB1-216ENST00000624720 TDRKHQ9Y2W6 561 aaKnown RBP9.81□□□□□ -0.84
USB1-216ENST00000624720 TCRBV5S4A2TA0A5A2 114 aa9.81□□□□□ -0.84
USB1-216ENST00000624720 SNTNA6NMZ2 147 aa9.81□□□□□ -0.84
USB1-216ENST00000624720 E9PMD0 336 aa9.81□□□□□ -0.84
USB1-216ENST00000624720 ZBTB7AO95365 584 aa9.81□□□□□ -0.84
USB1-216ENST00000624720 S100BP04271 92 aaPredicted RBP9.81□□□□□ -0.84
USB1-216ENST00000624720 ZFYP08048 801 aaPredicted RBP9.81□□□□□ -0.84
USB1-216ENST00000624720 ENO2P09104 434 aaPredicted RBP9.81□□□□□ -0.84
USB1-216ENST00000624720 SPATA31D3P0C874 917 aa9.81□□□□□ -0.84
USB1-216ENST00000624720 ATP6V1C1P21283 382 aa9.81□□□□□ -0.84
USB1-216ENST00000624720 ADD1P35611 737 aaKnown RBP9.81□□□□□ -0.84
USB1-216ENST00000624720 ZNF165P49910 485 aa9.81□□□□□ -0.84
USB1-216ENST00000624720 GTF2IP78347 998 aa9.81□□□□□ -0.84
USB1-216ENST00000624720 SPCS2Q15005 226 aa9.81□□□□□ -0.84
USB1-216ENST00000624720 Q3C1V9 767 aa9.81□□□□□ -0.84
USB1-216ENST00000624720 CMPK2Q5EBM0 449 aa9.81□□□□□ -0.84
USB1-216ENST00000624720 FAM47AQ5JRC9 791 aa9.81□□□□□ -0.84
USB1-216ENST00000624720 SPATA31D4Q6ZUB0 917 aa9.81□□□□□ -0.84
USB1-216ENST00000624720 TMTC1Q8IUR5 882 aa9.81□□□□□ -0.84
USB1-216ENST00000624720 SPATA2LQ8IUW3 424 aaPredicted RBP9.81□□□□□ -0.84
USB1-216ENST00000624720 CCDC63Q8NA47 563 aa9.81□□□□□ -0.84
USB1-216ENST00000624720 EHBP1Q8NDI1 1231 aa9.81□□□□□ -0.84
USB1-216ENST00000624720 GOT1L1Q8NHS2 421 aaPredicted RBP9.81□□□□□ -0.84
USB1-216ENST00000624720 SLC7A3Q8WY07 619 aa9.81□□□□□ -0.84
USB1-216ENST00000624720 NEK6Q9HC98 313 aa9.81□□□□□ -0.84
USB1-216ENST00000624720 RIC8AQ9NPQ8 531 aa9.81□□□□□ -0.84
USB1-216ENST00000624720 GMIPQ9P107 970 aa9.81□□□□□ -0.84
USB1-216ENST00000624720 POLLQ9UGP5 575 aa9.81□□□□□ -0.84
USB1-216ENST00000624720 GSG1L2A8MUP6 293 aa9.8□□□□□ -0.84
USB1-216ENST00000624720 OR5F1O95221 314 aa9.8□□□□□ -0.84
USB1-216ENST00000624720 BAG3O95817 575 aa9.8□□□□□ -0.84
USB1-216ENST00000624720 EPS15P42566 896 aa9.8□□□□□ -0.84
USB1-216ENST00000624720 MAP3K7CLP57077 242 aa9.8□□□□□ -0.84
USB1-216ENST00000624720 ANTXR2P58335 489 aa9.8□□□□□ -0.84
USB1-216ENST00000624720 RELAQ04206 551 aa9.8□□□□□ -0.84
USB1-216ENST00000624720 SEPT6Q14141 434 aa9.8□□□□□ -0.84
USB1-216ENST00000624720 ZNF268Q14587 947 aaPredicted RBP9.8□□□□□ -0.84
USB1-216ENST00000624720 PKN2Q16513 984 aaKnown RBP9.8□□□□□ -0.84
USB1-216ENST00000624720 ODF2Q5BJF6 829 aa9.8□□□□□ -0.84
USB1-216ENST00000624720 ANKMY2Q8IV38 441 aa9.8□□□□□ -0.84
USB1-216ENST00000624720 DDHD1Q8NEL9 900 aa9.8□□□□□ -0.84
USB1-216ENST00000624720 INTS12Q96CB8 462 aaKnown RBP9.8□□□□□ -0.84
USB1-216ENST00000624720 SPATA16Q9BXB7 569 aa9.8□□□□□ -0.84
USB1-216ENST00000624720 PPCSQ9HAB8 311 aa9.8□□□□□ -0.84
USB1-216ENST00000624720 VTA1Q9NP79 307 aa9.8□□□□□ -0.84
USB1-216ENST00000624720 CD93Q9NPY3 652 aa9.8□□□□□ -0.84
USB1-216ENST00000624720 SCAF8Q9UPN6 1271 aaKnown RBP9.8□□□□□ -0.84
USB1-216ENST00000624720 ATF5Q9Y2D1 282 aaPredicted RBP9.8□□□□□ -0.84
USB1-216ENST00000624720 SBF2Q86WG5 1849 aa9.8□□□□□ -0.84
USB1-216ENST00000624720 COL1A1P02452 1464 aaPredicted RBP9.8□□□□□ -0.84
USB1-216ENST00000624720 OR5K4A6NMS3 321 aa9.8□□□□□ -0.84
USB1-216ENST00000624720 USP17L12C9JPN9 530 aa9.8□□□□□ -0.84
USB1-216ENST00000624720 USP17L21D6R901 530 aa9.8□□□□□ -0.84
USB1-216ENST00000624720 PRMT3O60678 531 aa9.8□□□□□ -0.84
USB1-216ENST00000624720 ZBED1O96006 694 aa9.8□□□□□ -0.84
USB1-216ENST00000624720 SFPQP23246 707 aaKnown RBP eCLIP9.8□□□□□ -0.84
USB1-216ENST00000624720 IFNA8P32881 189 aa9.8□□□□□ -0.84
USB1-216ENST00000624720 RXRGP48443 463 aa9.8□□□□□ -0.84
USB1-216ENST00000624720 RUNX1T1Q06455 604 aa9.8□□□□□ -0.84
USB1-216ENST00000624720 PICALMQ13492 652 aa9.8□□□□□ -0.84
USB1-216ENST00000624720 KRT32Q14532 448 aa9.8□□□□□ -0.84
USB1-216ENST00000624720 MOGQ16653 247 aa9.8□□□□□ -0.84
USB1-216ENST00000624720 SDE2Q6IQ49 451 aa9.8□□□□□ -0.84
USB1-216ENST00000624720 TTC23LQ6PF05 361 aa9.8□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms