RNA–Protein interactions for RNA: ENST00000622183.1

CPNE3-213, Transcript of copine 3, humanhuman

TSL 3

Gene CPNE3, Length 156 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-213ENST00000622183 PDCD2LQ9BRP1 358 aa6.18□□□□□ -1.42
CPNE3-213ENST00000622183 TMEM168Q9H0V1 697 aa6.18□□□□□ -1.42
CPNE3-213ENST00000622183 OR10A2Q9H208 303 aa6.18□□□□□ -1.42
CPNE3-213ENST00000622183 BHMT2Q9H2M3 363 aa6.18□□□□□ -1.42
CPNE3-213ENST00000622183 TRPS1Q9UHF7 1281 aa6.18□□□□□ -1.42
CPNE3-213ENST00000622183 SH3D21A4FU49 640 aa6.17□□□□□ -1.42
CPNE3-213ENST00000622183 MTSS1O43312 755 aa6.17□□□□□ -1.42
CPNE3-213ENST00000622183 ARIH2O95376 493 aa6.17□□□□□ -1.42
CPNE3-213ENST00000622183 TAL1P17542 331 aaPredicted RBP6.17□□□□□ -1.42
CPNE3-213ENST00000622183 PEX2P28328 305 aa6.17□□□□□ -1.42
CPNE3-213ENST00000622183 CSF2RBP32927 897 aa6.17□□□□□ -1.42
CPNE3-213ENST00000622183 CRHR1P34998 444 aa6.17□□□□□ -1.42
CPNE3-213ENST00000622183 SREBF1P36956 1147 aa6.17□□□□□ -1.42
CPNE3-213ENST00000622183 KIR2DL3P43628 341 aa6.17□□□□□ -1.42
CPNE3-213ENST00000622183 GPSM2P81274 684 aa6.17□□□□□ -1.42
CPNE3-213ENST00000622183 CNN3Q15417 329 aaKnown RBP6.17□□□□□ -1.42
CPNE3-213ENST00000622183 LONRF3Q496Y0 759 aa6.17□□□□□ -1.42
CPNE3-213ENST00000622183 RNF220Q5VTB9 566 aa6.17□□□□□ -1.42
CPNE3-213ENST00000622183 SWSAP1Q6NVH7 229 aa6.17□□□□□ -1.42
CPNE3-213ENST00000622183 KRT78Q8N1N4 520 aa6.17□□□□□ -1.42
CPNE3-213ENST00000622183 Q8N3U1 123 aa6.17□□□□□ -1.42
CPNE3-213ENST00000622183 C3orf20Q8ND61 904 aa6.17□□□□□ -1.42
CPNE3-213ENST00000622183 PLBD2Q8NHP8 589 aa6.17□□□□□ -1.42
CPNE3-213ENST00000622183 ZNF526Q8TF50 670 aaPredicted RBP6.17□□□□□ -1.42
CPNE3-213ENST00000622183 GCDHQ92947 438 aaPredicted RBP6.17□□□□□ -1.42
CPNE3-213ENST00000622183 GJA10Q969M2 543 aa6.17□□□□□ -1.42
CPNE3-213ENST00000622183 CLPTM1LQ96KA5 538 aa6.17□□□□□ -1.42
CPNE3-213ENST00000622183 FAM167AQ96KS9 214 aa6.17□□□□□ -1.42
CPNE3-213ENST00000622183 SPATA25Q9BR10 227 aa6.17□□□□□ -1.42
CPNE3-213ENST00000622183 NAA15Q9BXJ9 866 aaKnown RBP6.17□□□□□ -1.42
CPNE3-213ENST00000622183 KLHL11Q9NVR0 708 aa6.17□□□□□ -1.42
CPNE3-213ENST00000622183 GPRC5DQ9NZD1 345 aa6.17□□□□□ -1.42
CPNE3-213ENST00000622183 CALCOCO1Q9P1Z2 691 aa6.17□□□□□ -1.42
CPNE3-213ENST00000622183 LRRC14BA6NHZ5 514 aa6.16□□□□□ -1.42
CPNE3-213ENST00000622183 PQBP1O60828 265 aaKnown RBP6.16□□□□□ -1.42
CPNE3-213ENST00000622183 PI3P19957 117 aa6.16□□□□□ -1.42
CPNE3-213ENST00000622183 AK2P54819 239 aa6.16□□□□□ -1.42
CPNE3-213ENST00000622183 PER3P56645 1201 aa6.16□□□□□ -1.42
CPNE3-213ENST00000622183 RAB1AP62820 205 aa6.16□□□□□ -1.42
CPNE3-213ENST00000622183 MESP2Q0VG99 397 aa6.16□□□□□ -1.42
CPNE3-213ENST00000622183 USP10Q14694 798 aaKnown RBP6.16□□□□□ -1.42
CPNE3-213ENST00000622183 CCDC157Q569K6 752 aa6.16□□□□□ -1.42
CPNE3-213ENST00000622183 AGBL4Q5VU57 503 aa6.16□□□□□ -1.42
CPNE3-213ENST00000622183 MAEAQ7L5Y9 396 aa6.16□□□□□ -1.42
CPNE3-213ENST00000622183 RSPH3Q86UC2 560 aa6.16□□□□□ -1.42
CPNE3-213ENST00000622183 SPICE1Q8N0Z3 855 aa6.16□□□□□ -1.42
CPNE3-213ENST00000622183 PQLC1Q8N2U9 271 aa6.16□□□□□ -1.42
CPNE3-213ENST00000622183 KLHL36Q8N4N3 616 aa6.16□□□□□ -1.42
CPNE3-213ENST00000622183 LILRA3Q8N6C8 439 aaPredicted RBP6.16□□□□□ -1.42
CPNE3-213ENST00000622183 IFI44Q8TCB0 444 aa6.16□□□□□ -1.42
CPNE3-213ENST00000622183 LRTOMTQ8WZ04 291 aa6.16□□□□□ -1.42
CPNE3-213ENST00000622183 RAB24Q969Q5 203 aa6.16□□□□□ -1.42
CPNE3-213ENST00000622183 SLC7A6OSQ96CW6 309 aaPredicted RBP6.16□□□□□ -1.42
CPNE3-213ENST00000622183 MTFMTQ96DP5 389 aaKnown RBP6.16□□□□□ -1.42
CPNE3-213ENST00000622183 KIAA1683Q9H0B3 1180 aa6.16□□□□□ -1.42
CPNE3-213ENST00000622183 BARX1Q9HBU1 254 aaPredicted RBP6.16□□□□□ -1.42
CPNE3-213ENST00000622183 LANCL2Q9NS86 450 aa6.16□□□□□ -1.42
CPNE3-213ENST00000622183 LMBRD1Q9NUN5 540 aa6.16□□□□□ -1.42
CPNE3-213ENST00000622183 ING3Q9NXR8 418 aa6.16□□□□□ -1.42
CPNE3-213ENST00000622183 ADAM29Q9UKF5 820 aa6.16□□□□□ -1.42
CPNE3-213ENST00000622183 FAM184BQ9ULE4 1060 aa6.16□□□□□ -1.42
CPNE3-213ENST00000622183 PCDHGB6Q9Y5F9 930 aa6.16□□□□□ -1.42
CPNE3-213ENST00000622183 C9orf118A6NHY6 69 aa6.15□□□□□ -1.42
CPNE3-213ENST00000622183 FRS3O43559 492 aa6.15□□□□□ -1.42
CPNE3-213ENST00000622183 ITGA10O75578 1167 aa6.15□□□□□ -1.42
CPNE3-213ENST00000622183 TOX4O94842 621 aa6.15□□□□□ -1.42
CPNE3-213ENST00000622183 AMY1AP04745 511 aa6.15□□□□□ -1.42
CPNE3-213ENST00000622183 CYP1A1P04798 512 aaPredicted RBP6.15□□□□□ -1.42
CPNE3-213ENST00000622183 ZNF888P0CJ79 500 aaPredicted RBP6.15□□□□□ -1.42
CPNE3-213ENST00000622183 GYPEP15421 78 aa6.15□□□□□ -1.42
CPNE3-213ENST00000622183 SYN1P17600 705 aa6.15□□□□□ -1.42
CPNE3-213ENST00000622183 GUCY1A2P33402 732 aa6.15□□□□□ -1.42
CPNE3-213ENST00000622183 TM4SF4P48230 202 aa6.15□□□□□ -1.42
CPNE3-213ENST00000622183 SARSP49591 514 aaKnown RBP6.15□□□□□ -1.42
CPNE3-213ENST00000622183 NKX6-1P78426 367 aaPredicted RBP6.15□□□□□ -1.42
CPNE3-213ENST00000622183 ATP8B2P98198 1209 aa6.15□□□□□ -1.42
CPNE3-213ENST00000622183 TLE1Q04724 770 aa6.15□□□□□ -1.42
CPNE3-213ENST00000622183 POLD3Q15054 466 aaPredicted RBP6.15□□□□□ -1.42
CPNE3-213ENST00000622183 FAM26FQ5R3K3 315 aa6.15□□□□□ -1.42
CPNE3-213ENST00000622183 SYDE1Q6ZW31 735 aaPredicted RBP6.15□□□□□ -1.42
CPNE3-213ENST00000622183 HEATR3Q7Z4Q2 680 aa6.15□□□□□ -1.42
CPNE3-213ENST00000622183 MORC1Q86VD1 984 aa6.15□□□□□ -1.42
CPNE3-213ENST00000622183 CCHCR1Q8TD31 782 aa6.15□□□□□ -1.42
CPNE3-213ENST00000622183 TMX3Q96JJ7 454 aa6.15□□□□□ -1.42
CPNE3-213ENST00000622183 UHRF1Q96T88 793 aaPredicted RBP6.15□□□□□ -1.42
CPNE3-213ENST00000622183 NUP62CLQ9H1M0 184 aa6.15□□□□□ -1.42
CPNE3-213ENST00000622183 TAGLN3Q9UI15 199 aa6.15□□□□□ -1.42
CPNE3-213ENST00000622183 CNOT6Q9ULM6 557 aaKnown RBP6.15□□□□□ -1.42
CPNE3-213ENST00000622183 RBM8AQ9Y5S9 174 aaKnown RBP6.15□□□□□ -1.42
CPNE3-213ENST00000622183 ADCY6O43306 1168 aa6.14□□□□□ -1.43
CPNE3-213ENST00000622183 MGEA5O60502 916 aa6.14□□□□□ -1.43
CPNE3-213ENST00000622183 GPR32O75388 356 aa6.14□□□□□ -1.43
CPNE3-213ENST00000622183 JUNP05412 331 aaKnown RBP6.14□□□□□ -1.43
CPNE3-213ENST00000622183 VSIG10L2P0DP72 767 aa6.14□□□□□ -1.43
CPNE3-213ENST00000622183 ALDH5A1P51649 535 aaPredicted RBP6.14□□□□□ -1.43
CPNE3-213ENST00000622183 HGFACQ04756 655 aa6.14□□□□□ -1.43
CPNE3-213ENST00000622183 FGL2Q14314 439 aa6.14□□□□□ -1.43
CPNE3-213ENST00000622183 GAGE13Q4V321 117 aa6.14□□□□□ -1.43
CPNE3-213ENST00000622183 KHDC1Q4VXA5 237 aaKnown RBP6.14□□□□□ -1.43
CPNE3-213ENST00000622183 ZMAT1Q5H9K5 638 aa6.14□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms