RNA–Protein interactions for RNA: ENST00000621396.4

CBWD3-216, Transcript of COBW domain containing 3, humanhuman

TSL 2

Gene CBWD3, Length 2,437 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-216ENST00000621396 MFAP3LO75121 409 aa17.31■□□□□ 0.36
CBWD3-216ENST00000621396 PIGRP01833 764 aa17.31■□□□□ 0.36
CBWD3-216ENST00000621396 FMO5P49326 533 aa17.31■□□□□ 0.36
CBWD3-216ENST00000621396 SLC9C1Q4G0N8 1177 aa17.31■□□□□ 0.36
CBWD3-216ENST00000621396 HS1BP3Q53T59 392 aa17.31■□□□□ 0.36
CBWD3-216ENST00000621396 INTS8Q75QN2 995 aaKnown RBP17.31■□□□□ 0.36
CBWD3-216ENST00000621396 TMEM130Q8N3G9 435 aa17.31■□□□□ 0.36
CBWD3-216ENST00000621396 TTYH3Q9C0H2 523 aa17.31■□□□□ 0.36
CBWD3-216ENST00000621396 GCNT4Q9P109 453 aa17.31■□□□□ 0.36
CBWD3-216ENST00000621396 STYXL1Q9Y6J8 313 aa17.31■□□□□ 0.36
CBWD3-216ENST00000621396 LRRIQ3A6PVS8 624 aaPredicted RBP17.31■□□□□ 0.36
CBWD3-216ENST00000621396 ABLIM1O14639 778 aa17.31■□□□□ 0.36
CBWD3-216ENST00000621396 NOL4O94818 638 aa17.31■□□□□ 0.36
CBWD3-216ENST00000621396 MYBPC2Q14324 1141 aa17.31■□□□□ 0.36
CBWD3-216ENST00000621396 ZNF568Q3ZCX4 644 aa17.31■□□□□ 0.36
CBWD3-216ENST00000621396 PARD3BQ8TEW8 1205 aa17.31■□□□□ 0.36
CBWD3-216ENST00000621396 FBXL18Q96ME1 805 aa17.31■□□□□ 0.36
CBWD3-216ENST00000621396 DEFB118Q96PH6 123 aa17.31■□□□□ 0.36
CBWD3-216ENST00000621396 OSBPL7Q9BZF2 842 aa17.31■□□□□ 0.36
CBWD3-216ENST00000621396 ESPNB1AK53 854 aa17.3■□□□□ 0.36
CBWD3-216ENST00000621396 KPNA6O60684 536 aa17.3■□□□□ 0.36
CBWD3-216ENST00000621396 HOXC8P31273 242 aa17.3■□□□□ 0.36
CBWD3-216ENST00000621396 SNRPFP62306 86 aaKnown RBP17.3■□□□□ 0.36
CBWD3-216ENST00000621396 CYP24A1Q07973 514 aa17.3■□□□□ 0.36
CBWD3-216ENST00000621396 EXOC3L4Q17RC7 722 aa17.3■□□□□ 0.36
CBWD3-216ENST00000621396 ZSCAN30Q86W11 494 aa17.3■□□□□ 0.36
CBWD3-216ENST00000621396 XRN2Q9H0D6 950 aaKnown RBP eCLIP17.3■□□□□ 0.36
CBWD3-216ENST00000621396 PTPRJQ12913 1337 aa17.3■□□□□ 0.36
CBWD3-216ENST00000621396 SCN10AQ9Y5Y9 1956 aa17.3■□□□□ 0.36
CBWD3-216ENST00000621396 ZNF233A6NK53 670 aa17.3■□□□□ 0.36
CBWD3-216ENST00000621396 EXTL3O43909 919 aa17.3■□□□□ 0.36
CBWD3-216ENST00000621396 ERLIN2O94905 339 aa17.3■□□□□ 0.36
CBWD3-216ENST00000621396 PON1P27169 355 aa17.3■□□□□ 0.36
CBWD3-216ENST00000621396 POLR2FP61218 127 aaKnown RBP17.3■□□□□ 0.36
CBWD3-216ENST00000621396 ITGA7Q13683 1181 aa17.3■□□□□ 0.36
CBWD3-216ENST00000621396 MTF1Q14872 753 aa17.3■□□□□ 0.36
CBWD3-216ENST00000621396 ZPBP2Q6X784 338 aa17.3■□□□□ 0.36
CBWD3-216ENST00000621396 TSHZ1Q6ZSZ6 1077 aa17.3■□□□□ 0.36
CBWD3-216ENST00000621396 PCSK9Q8NBP7 692 aaKnown RBP17.3■□□□□ 0.36
CBWD3-216ENST00000621396 CCDC150Q8NCX0 1101 aa17.3■□□□□ 0.36
CBWD3-216ENST00000621396 PTPRHQ9HD43 1115 aa17.3■□□□□ 0.36
CBWD3-216ENST00000621396 ABHD10Q9NUJ1 306 aa17.3■□□□□ 0.36
CBWD3-216ENST00000621396 RBAKQ9NYW8 714 aaPredicted RBP17.3■□□□□ 0.36
CBWD3-216ENST00000621396 LUC7L2Q9Y383 392 aaKnown RBP17.3■□□□□ 0.36
CBWD3-216ENST00000621396 FAM189A1O60320 539 aa17.29■□□□□ 0.36
CBWD3-216ENST00000621396 TSPAN1O60635 241 aa17.29■□□□□ 0.36
CBWD3-216ENST00000621396 GNAT1P11488 350 aa17.29■□□□□ 0.36
CBWD3-216ENST00000621396 NKX3-2P78367 333 aa17.29■□□□□ 0.36
CBWD3-216ENST00000621396 E4F1Q66K89 784 aaPredicted RBP17.29■□□□□ 0.36
CBWD3-216ENST00000621396 SLFN12LQ6IEE8 588 aa17.29■□□□□ 0.36
CBWD3-216ENST00000621396 TMEM139Q8IV31 216 aa17.29■□□□□ 0.36
CBWD3-216ENST00000621396 TMEM174Q8WUU8 243 aa17.29■□□□□ 0.36
CBWD3-216ENST00000621396 NFKBIZQ9BYH8 718 aa17.29■□□□□ 0.36
CBWD3-216ENST00000621396 TMEM117Q9H0C3 514 aa17.29■□□□□ 0.36
CBWD3-216ENST00000621396 RNF208Q9H0X6 261 aa17.29■□□□□ 0.36
CBWD3-216ENST00000621396 RNF19AQ9NV58 838 aa17.29■□□□□ 0.36
CBWD3-216ENST00000621396 PRMT7Q9NVM4 692 aaPredicted RBP17.29■□□□□ 0.36
CBWD3-216ENST00000621396 AJAP1Q9UKB5 411 aaPredicted RBP17.29■□□□□ 0.36
CBWD3-216ENST00000621396 PNMA6AP0CW24 399 aaPredicted RBP17.29■□□□□ 0.36
CBWD3-216ENST00000621396 CST5P28325 142 aaPredicted RBP17.29■□□□□ 0.36
CBWD3-216ENST00000621396 ABCD1P33897 745 aa17.29■□□□□ 0.36
CBWD3-216ENST00000621396 PTGISQ16647 500 aa17.29■□□□□ 0.36
CBWD3-216ENST00000621396 NEK11Q8NG66 645 aa17.29■□□□□ 0.36
CBWD3-216ENST00000621396 ZNF516Q92618 1163 aa17.29■□□□□ 0.36
CBWD3-216ENST00000621396 MFSD14AQ96MC6 490 aa17.29■□□□□ 0.36
CBWD3-216ENST00000621396 CDT1Q9H211 546 aa17.29■□□□□ 0.36
CBWD3-216ENST00000621396 CAPN11Q9UMQ6 739 aa17.29■□□□□ 0.36
CBWD3-216ENST00000621396 SOWAHDA6NJG2 315 aa17.28■□□□□ 0.36
CBWD3-216ENST00000621396 TNNI1P19237 187 aa17.28■□□□□ 0.36
CBWD3-216ENST00000621396 MYL7Q01449 175 aa17.28■□□□□ 0.36
CBWD3-216ENST00000621396 NOLC1Q14978 699 aaKnown RBP eCLIP17.28■□□□□ 0.36
CBWD3-216ENST00000621396 MPZL3Q6UWV2 235 aa17.28■□□□□ 0.36
CBWD3-216ENST00000621396 RRAGAQ7L523 313 aa17.28■□□□□ 0.36
CBWD3-216ENST00000621396 CATSPER4Q7RTX7 472 aa17.28■□□□□ 0.36
CBWD3-216ENST00000621396 KCNN1Q92952 543 aa17.28■□□□□ 0.36
CBWD3-216ENST00000621396 GLT1D1Q96MS3 346 aa17.28■□□□□ 0.36
CBWD3-216ENST00000621396 CHP1Q99653 195 aa17.28■□□□□ 0.36
CBWD3-216ENST00000621396 BAG1Q99933 345 aaPredicted RBP17.28■□□□□ 0.36
CBWD3-216ENST00000621396 PDZD7Q9H5P4 517 aa17.28■□□□□ 0.36
CBWD3-216ENST00000621396 HES2Q9Y543 173 aa17.28■□□□□ 0.36
CBWD3-216ENST00000621396 TPM1P09493 284 aa17.28■□□□□ 0.36
CBWD3-216ENST00000621396 PROZP22891 400 aa17.28■□□□□ 0.36
CBWD3-216ENST00000621396 EIF4BP23588 611 aaKnown RBP17.28■□□□□ 0.36
CBWD3-216ENST00000621396 MSNP26038 577 aaKnown RBP17.28■□□□□ 0.36
CBWD3-216ENST00000621396 HOXA11P31270 313 aaPredicted RBP17.28■□□□□ 0.36
CBWD3-216ENST00000621396 PRMT2P55345 433 aa17.28■□□□□ 0.36
CBWD3-216ENST00000621396 POU5F1BQ06416 359 aa17.28■□□□□ 0.36
CBWD3-216ENST00000621396 MCL1Q07820 350 aa17.28■□□□□ 0.36
CBWD3-216ENST00000621396 SNX17Q15036 470 aa17.28■□□□□ 0.36
CBWD3-216ENST00000621396 ENOX2Q16206 610 aaKnown RBP17.28■□□□□ 0.36
CBWD3-216ENST00000621396 GBP6Q6ZN66 633 aa17.28■□□□□ 0.36
CBWD3-216ENST00000621396 ZNF410Q86VK4 478 aa17.28■□□□□ 0.36
CBWD3-216ENST00000621396 GCOM2Q9BZD3 368 aaPredicted RBP17.28■□□□□ 0.36
CBWD3-216ENST00000621396 TRPV6Q9H1D0 765 aa17.28■□□□□ 0.36
CBWD3-216ENST00000621396 A0A1W2PQ45 241 aaPredicted RBP17.27■□□□□ 0.36
CBWD3-216ENST00000621396 A0A1W2PQY0 241 aa17.27■□□□□ 0.36
CBWD3-216ENST00000621396 LRRC53A6NM62 1247 aa17.27■□□□□ 0.36
CBWD3-216ENST00000621396 DARSP14868 501 aaKnown RBP17.27■□□□□ 0.36
CBWD3-216ENST00000621396 ARID5AQ03989 594 aa17.27■□□□□ 0.36
CBWD3-216ENST00000621396 DPY19L2P1Q6NXN4 242 aa17.27■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms