RNA–Protein interactions for RNA: ENST00000618395.4

COL5A1-208, Transcript of collagen type V alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL5A1, Length 8,437 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-208ENST00000618395 C6orf62Q9GZU0 229 aaPredicted RBP15.84■□□□□ 0.13
COL5A1-208ENST00000618395 H2AFY2Q9P0M6 372 aaPredicted RBP15.84■□□□□ 0.13
COL5A1-208ENST00000618395 COBLO75128 1261 aa15.84■□□□□ 0.13
COL5A1-208ENST00000618395 KCNJ6P48051 423 aa15.84■□□□□ 0.13
COL5A1-208ENST00000618395 SARSP49591 514 aaKnown RBP15.84■□□□□ 0.13
COL5A1-208ENST00000618395 MYL10Q9BUA6 226 aa15.84■□□□□ 0.13
COL5A1-208ENST00000618395 C8orf4Q9NR00 106 aa15.84■□□□□ 0.13
COL5A1-208ENST00000618395 PARD3Q8TEW0 1356 aa15.84■□□□□ 0.13
COL5A1-208ENST00000618395 MYH7P12883 1935 aa15.84■□□□□ 0.13
COL5A1-208ENST00000618395 PPM1NQ8N819 430 aa15.84■□□□□ 0.13
COL5A1-208ENST00000618395 OTUD7AQ8TE49 926 aaPredicted RBP15.84■□□□□ 0.13
COL5A1-208ENST00000618395 ZNF219Q9P2Y4 722 aaPredicted RBP15.84■□□□□ 0.13
COL5A1-208ENST00000618395 PRDM4Q9UKN5 801 aa15.84■□□□□ 0.13
COL5A1-208ENST00000618395 TLR3O15455 904 aaKnown RBP15.84■□□□□ 0.13
COL5A1-208ENST00000618395 EFR3AQ14156 821 aa15.84■□□□□ 0.13
COL5A1-208ENST00000618395 PTK2BQ14289 1009 aa15.84■□□□□ 0.13
COL5A1-208ENST00000618395 NCAPHQ15003 741 aa15.84■□□□□ 0.13
COL5A1-208ENST00000618395 SCUBE1Q8IWY4 988 aa15.84■□□□□ 0.13
COL5A1-208ENST00000618395 GJA10Q969M2 543 aa15.84■□□□□ 0.13
COL5A1-208ENST00000618395 PPP1R36Q96LQ0 422 aa15.84■□□□□ 0.13
COL5A1-208ENST00000618395 FOXP1Q9H334 677 aaPredicted RBP15.84■□□□□ 0.13
COL5A1-208ENST00000618395 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.84■□□□□ 0.13
COL5A1-208ENST00000618395 ITGADQ13349 1161 aa15.84■□□□□ 0.13
COL5A1-208ENST00000618395 IZUMO2Q6UXV1 221 aa15.84■□□□□ 0.13
COL5A1-208ENST00000618395 PEG3Q9GZU2 1588 aa15.84■□□□□ 0.13
COL5A1-208ENST00000618395 LDHBP07195 334 aaKnown RBP15.83■□□□□ 0.13
COL5A1-208ENST00000618395 BBS7Q8IWZ6 715 aa15.83■□□□□ 0.13
COL5A1-208ENST00000618395 ARPP21Q9UBL0 812 aaPredicted RBP15.83■□□□□ 0.13
COL5A1-208ENST00000618395 ADCY9O60503 1353 aa15.83■□□□□ 0.13
COL5A1-208ENST00000618395 LRRC63Q05C16 580 aa15.83■□□□□ 0.13
COL5A1-208ENST00000618395 MYBPC2Q14324 1141 aa15.83■□□□□ 0.13
COL5A1-208ENST00000618395 HACE1Q8IYU2 909 aa15.83■□□□□ 0.13
COL5A1-208ENST00000618395 HNRNPLLQ8WVV9 542 aaKnown RBP15.83■□□□□ 0.13
COL5A1-208ENST00000618395 PPP2R3CQ969Q6 453 aa15.83■□□□□ 0.13
COL5A1-208ENST00000618395 SYCP2Q9BX26 1530 aa15.83■□□□□ 0.13
COL5A1-208ENST00000618395 GATAD2AQ86YP4 633 aa15.83■□□□□ 0.12
COL5A1-208ENST00000618395 MB21D1Q8N884 522 aa15.83■□□□□ 0.12
COL5A1-208ENST00000618395 DDX25Q9UHL0 483 aaKnown RBP15.83■□□□□ 0.12
COL5A1-208ENST00000618395 POLR3AO14802 1390 aaPredicted RBP15.83■□□□□ 0.12
COL5A1-208ENST00000618395 BNC1Q01954 994 aa15.83■□□□□ 0.12
COL5A1-208ENST00000618395 DGUOKQ16854 277 aa15.83■□□□□ 0.12
COL5A1-208ENST00000618395 FAM102BQ5T8I3 360 aa15.83■□□□□ 0.12
COL5A1-208ENST00000618395 LINS1Q8NG48 757 aa15.83■□□□□ 0.12
COL5A1-208ENST00000618395 RPRD1BQ9NQG5 326 aaKnown RBP15.83■□□□□ 0.12
COL5A1-208ENST00000618395 HACD3Q9P035 362 aa15.83■□□□□ 0.12
COL5A1-208ENST00000618395 USP27XA6NNY8 438 aa15.83■□□□□ 0.12
COL5A1-208ENST00000618395 KRT20P35900 424 aa15.83■□□□□ 0.12
COL5A1-208ENST00000618395 ZNF618Q5T7W0 954 aa15.83■□□□□ 0.12
COL5A1-208ENST00000618395 SNX30Q5VWJ9 437 aa15.83■□□□□ 0.12
COL5A1-208ENST00000618395 DEPTORQ8TB45 409 aa15.83■□□□□ 0.12
COL5A1-208ENST00000618395 BHMTQ93088 406 aa15.83■□□□□ 0.12
COL5A1-208ENST00000618395 ARIH2O95376 493 aa15.83■□□□□ 0.12
COL5A1-208ENST00000618395 DDX5P17844 614 aaKnown RBP15.83■□□□□ 0.12
COL5A1-208ENST00000618395 KBTBD3Q8NAB2 608 aa15.83■□□□□ 0.12
COL5A1-208ENST00000618395 MYCBPAPQ8TBZ2 947 aa15.83■□□□□ 0.12
COL5A1-208ENST00000618395 VWA5AO00534 786 aa15.83■□□□□ 0.12
COL5A1-208ENST00000618395 ZBTB39O15060 712 aa15.83■□□□□ 0.12
COL5A1-208ENST00000618395 IFNL2Q8IZJ0 200 aa15.83■□□□□ 0.12
COL5A1-208ENST00000618395 DMAP1Q9NPF5 467 aaPredicted RBP15.83■□□□□ 0.12
COL5A1-208ENST00000618395 ADAMTS1Q9UHI8 967 aa15.83■□□□□ 0.12
COL5A1-208ENST00000618395 BAZ2BQ9UIF8 2168 aaKnown RBP15.82■□□□□ 0.12
COL5A1-208ENST00000618395 TCN1P20061 433 aaPredicted RBP15.82■□□□□ 0.12
COL5A1-208ENST00000618395 RFC5P40937 340 aa15.82■□□□□ 0.12
COL5A1-208ENST00000618395 AKIRIN2Q53H80 203 aa15.82■□□□□ 0.12
COL5A1-208ENST00000618395 ZBED8Q8IZ13 594 aa15.82■□□□□ 0.12
COL5A1-208ENST00000618395 ACAP3Q96P50 834 aa15.82■□□□□ 0.12
COL5A1-208ENST00000618395 DDX56Q9NY93 547 aaKnown RBP15.82■□□□□ 0.12
COL5A1-208ENST00000618395 MAP3K5Q99683 1374 aa15.82■□□□□ 0.12
COL5A1-208ENST00000618395 RPRD2Q5VT52 1461 aaKnown RBP15.82■□□□□ 0.12
COL5A1-208ENST00000618395 SYNJ2BP-COX16A0A087WUM0 186 aa15.82■□□□□ 0.12
COL5A1-208ENST00000618395 ALOX12P18054 663 aa15.82■□□□□ 0.12
COL5A1-208ENST00000618395 TAF2Q6P1X5 1199 aa15.82■□□□□ 0.12
COL5A1-208ENST00000618395 AGR3Q8TD06 166 aa15.82■□□□□ 0.12
COL5A1-208ENST00000618395 COX16Q9P0S2 106 aa15.82■□□□□ 0.12
COL5A1-208ENST00000618395 NINQ8N4C6 2090 aa15.82■□□□□ 0.12
COL5A1-208ENST00000618395 PLEKHA8Q96JA3 519 aa15.82■□□□□ 0.12
COL5A1-208ENST00000618395 CDYLQ9Y232 598 aa15.82■□□□□ 0.12
COL5A1-208ENST00000618395 FKBP6O75344 327 aa15.82■□□□□ 0.12
COL5A1-208ENST00000618395 PSMA3P25788 255 aa15.82■□□□□ 0.12
COL5A1-208ENST00000618395 HADHAP40939 763 aa15.82■□□□□ 0.12
COL5A1-208ENST00000618395 TMEM79Q9BSE2 394 aa15.82■□□□□ 0.12
COL5A1-208ENST00000618395 NYXQ9GZU5 481 aa15.82■□□□□ 0.12
COL5A1-208ENST00000618395 CCDC130P13994 396 aa15.82■□□□□ 0.12
COL5A1-208ENST00000618395 CIITAP33076 1130 aa15.82■□□□□ 0.12
COL5A1-208ENST00000618395 RIBC1Q8N443 379 aaPredicted RBP15.82■□□□□ 0.12
COL5A1-208ENST00000618395 RNPC3Q96LT9 517 aaKnown RBP15.82■□□□□ 0.12
COL5A1-208ENST00000618395 CITED4Q96RK1 184 aa15.82■□□□□ 0.12
COL5A1-208ENST00000618395 NDST4Q9H3R1 872 aa15.82■□□□□ 0.12
COL5A1-208ENST00000618395 POU5F1BQ06416 359 aa15.82■□□□□ 0.12
COL5A1-208ENST00000618395 TRMT5Q32P41 509 aaKnown RBP15.82■□□□□ 0.12
COL5A1-208ENST00000618395 LMBRD2Q68DH5 695 aaPredicted RBP15.82■□□□□ 0.12
COL5A1-208ENST00000618395 SETDB2Q96T68 719 aa15.82■□□□□ 0.12
COL5A1-208ENST00000618395 UBE2TQ9NPD8 197 aaPredicted RBP15.82■□□□□ 0.12
COL5A1-208ENST00000618395 RRN3Q9NYV6 651 aa15.82■□□□□ 0.12
COL5A1-208ENST00000618395 TELO2Q9Y4R8 837 aa15.82■□□□□ 0.12
COL5A1-208ENST00000618395 MAP3K19Q56UN5 1328 aa15.81■□□□□ 0.12
COL5A1-208ENST00000618395 LRRC74BQ6ZQY2 392 aa15.81■□□□□ 0.12
COL5A1-208ENST00000618395 ULK4Q96C45 1275 aa15.81■□□□□ 0.12
COL5A1-208ENST00000618395 SERHL2Q9H4I8 314 aa15.81■□□□□ 0.12
COL5A1-208ENST00000618395 TUFT1Q9NNX1 390 aa15.81■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms