RNA–Protein interactions for RNA: ENST00000608903.5

CTCFL-221, Transcript of CCCTC-binding factor like, humanhuman

TSL 1 (best) BASIC

Gene CTCFL, Length 2,135 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-221ENST00000608903 CD4P01730 458 aa12.61□□□□□ -0.39
CTCFL-221ENST00000608903 ABCD1P33897 745 aa12.61□□□□□ -0.39
CTCFL-221ENST00000608903 PSMC2P35998 433 aaKnown RBP12.61□□□□□ -0.39
CTCFL-221ENST00000608903 THPOP40225 353 aa12.61□□□□□ -0.39
CTCFL-221ENST00000608903 PBX1P40424 430 aa12.61□□□□□ -0.39
CTCFL-221ENST00000608903 MTIF2P46199 727 aaKnown RBP12.61□□□□□ -0.39
CTCFL-221ENST00000608903 ATN1P54259 1190 aaPredicted RBP12.61□□□□□ -0.39
CTCFL-221ENST00000608903 DLG4P78352 724 aa12.61□□□□□ -0.39
CTCFL-221ENST00000608903 SPAG1Q07617 926 aa12.61□□□□□ -0.39
CTCFL-221ENST00000608903 CCDC40Q4G0X9 1142 aa12.61□□□□□ -0.39
CTCFL-221ENST00000608903 FRMD5Q7Z6J6 570 aa12.61□□□□□ -0.39
CTCFL-221ENST00000608903 FAM186BQ8IYM0 893 aa12.61□□□□□ -0.39
CTCFL-221ENST00000608903 CEP120Q8N960 986 aa12.61□□□□□ -0.39
CTCFL-221ENST00000608903 PRMT7Q9NVM4 692 aaPredicted RBP12.61□□□□□ -0.39
CTCFL-221ENST00000608903 MAGEC2Q9UBF1 373 aaPredicted RBP12.61□□□□□ -0.39
CTCFL-221ENST00000608903 TNFSF13BQ9Y275 285 aa12.61□□□□□ -0.39
CTCFL-221ENST00000608903 TRPV2Q9Y5S1 764 aa12.61□□□□□ -0.39
CTCFL-221ENST00000608903 CNTNAP2Q9UHC6 1331 aa12.61□□□□□ -0.39
CTCFL-221ENST00000608903 DYNC1I1O14576 645 aa12.61□□□□□ -0.39
CTCFL-221ENST00000608903 TOM1L1O75674 476 aa12.61□□□□□ -0.39
CTCFL-221ENST00000608903 TNFSF9P41273 254 aa12.61□□□□□ -0.39
CTCFL-221ENST00000608903 ACOT2P49753 483 aa12.61□□□□□ -0.39
CTCFL-221ENST00000608903 MCCD1P59942 119 aaPredicted RBP12.61□□□□□ -0.39
CTCFL-221ENST00000608903 MCL1Q07820 350 aa12.61□□□□□ -0.39
CTCFL-221ENST00000608903 ARID5BQ14865 1188 aa12.61□□□□□ -0.39
CTCFL-221ENST00000608903 ZNF618Q5T7W0 954 aa12.61□□□□□ -0.39
CTCFL-221ENST00000608903 SLC39A5Q6ZMH5 540 aa12.61□□□□□ -0.39
CTCFL-221ENST00000608903 FAM228AQ86W67 206 aa12.61□□□□□ -0.39
CTCFL-221ENST00000608903 FAM114A1Q8IWE2 563 aa12.61□□□□□ -0.39
CTCFL-221ENST00000608903 TMEM192Q8IY95 271 aa12.61□□□□□ -0.39
CTCFL-221ENST00000608903 FAM213AQ9BRX8 229 aa12.61□□□□□ -0.39
CTCFL-221ENST00000608903 MKNK1Q9BUB5 465 aa12.61□□□□□ -0.39
CTCFL-221ENST00000608903 CDT1Q9H211 546 aa12.61□□□□□ -0.39
CTCFL-221ENST00000608903 AGO3Q9H9G7 860 aaKnown RBP12.61□□□□□ -0.39
CTCFL-221ENST00000608903 LGALS16A8MUM7 142 aa12.6□□□□□ -0.39
CTCFL-221ENST00000608903 GOLGA6L6A8MZA4 724 aa12.6□□□□□ -0.39
CTCFL-221ENST00000608903 N4BP3O15049 544 aa12.6□□□□□ -0.39
CTCFL-221ENST00000608903 GNA14O95837 355 aa12.6□□□□□ -0.39
CTCFL-221ENST00000608903 HARSP12081 509 aaKnown RBP12.6□□□□□ -0.39
CTCFL-221ENST00000608903 CDC42EP1Q00587 391 aa12.6□□□□□ -0.39
CTCFL-221ENST00000608903 MBTPS1Q14703 1052 aa12.6□□□□□ -0.39
CTCFL-221ENST00000608903 VWA3BQ502W6 1294 aa12.6□□□□□ -0.39
CTCFL-221ENST00000608903 FAM26DQ5JW98 314 aa12.6□□□□□ -0.39
CTCFL-221ENST00000608903 GPD1LQ8N335 351 aa12.6□□□□□ -0.39
CTCFL-221ENST00000608903 KIAA1524Q8TCG1 905 aa12.6□□□□□ -0.39
CTCFL-221ENST00000608903 SLC35C1Q96A29 364 aa12.6□□□□□ -0.39
CTCFL-221ENST00000608903 MFSD14AQ96MC6 490 aa12.6□□□□□ -0.39
CTCFL-221ENST00000608903 MSTO1Q9BUK6 570 aa12.6□□□□□ -0.39
CTCFL-221ENST00000608903 NOC4LQ9BVI4 516 aaKnown RBP12.6□□□□□ -0.39
CTCFL-221ENST00000608903 ARMCX3Q9UH62 379 aaPredicted RBP12.6□□□□□ -0.39
CTCFL-221ENST00000608903 AGO2Q9UKV8 859 aaKnown RBP12.6□□□□□ -0.39
CTCFL-221ENST00000608903 A0A1B0GUA9 196 aa12.59□□□□□ -0.39
CTCFL-221ENST00000608903 CLDN3O15551 220 aa12.59□□□□□ -0.39
CTCFL-221ENST00000608903 EXTL3O43909 919 aa12.59□□□□□ -0.39
CTCFL-221ENST00000608903 TRIM49P0CI25 452 aa12.59□□□□□ -0.39
CTCFL-221ENST00000608903 TRIM49CP0CI26 452 aa12.59□□□□□ -0.39
CTCFL-221ENST00000608903 EPB41P11171 864 aaKnown RBP12.59□□□□□ -0.39
CTCFL-221ENST00000608903 CKBP12277 381 aa12.59□□□□□ -0.39
CTCFL-221ENST00000608903 KLK7P49862 253 aa12.59□□□□□ -0.39
CTCFL-221ENST00000608903 GPNMBQ14956 572 aa12.59□□□□□ -0.39
CTCFL-221ENST00000608903 SNRNP35Q16560 246 aaKnown RBP12.59□□□□□ -0.39
CTCFL-221ENST00000608903 MAN2A1Q16706 1144 aa12.59□□□□□ -0.39
CTCFL-221ENST00000608903 SCARA3Q6AZY7 606 aa12.59□□□□□ -0.39
CTCFL-221ENST00000608903 MPZL3Q6UWV2 235 aa12.59□□□□□ -0.39
CTCFL-221ENST00000608903 CACTINQ8WUQ7 758 aaKnown RBP12.59□□□□□ -0.39
CTCFL-221ENST00000608903 PRIMPOLQ96LW4 560 aa12.59□□□□□ -0.39
CTCFL-221ENST00000608903 POP1Q99575 1024 aaKnown RBP12.59□□□□□ -0.39
CTCFL-221ENST00000608903 NDST4Q9H3R1 872 aa12.59□□□□□ -0.39
CTCFL-221ENST00000608903 TPM3P06753 285 aa12.59□□□□□ -0.39
CTCFL-221ENST00000608903 RBM10P98175 930 aaKnown RBP12.59□□□□□ -0.39
CTCFL-221ENST00000608903 KCNMA1Q12791 1236 aa12.59□□□□□ -0.39
CTCFL-221ENST00000608903 KCNH2Q12809 1159 aa12.59□□□□□ -0.39
CTCFL-221ENST00000608903 NOLC1Q14978 699 aaKnown RBP eCLIP12.59□□□□□ -0.39
CTCFL-221ENST00000608903 UBXN11Q5T124 520 aa12.59□□□□□ -0.39
CTCFL-221ENST00000608903 SLFN12LQ6IEE8 588 aa12.59□□□□□ -0.39
CTCFL-221ENST00000608903 CATSPER4Q7RTX7 472 aa12.59□□□□□ -0.39
CTCFL-221ENST00000608903 PAWRQ96IZ0 340 aaKnown RBP12.59□□□□□ -0.39
CTCFL-221ENST00000608903 PKNOX2Q96KN3 472 aa12.59□□□□□ -0.39
CTCFL-221ENST00000608903 EIF2AQ9BY44 585 aaKnown RBP12.59□□□□□ -0.39
CTCFL-221ENST00000608903 CXCL16Q9H2A7 254 aa12.59□□□□□ -0.39
CTCFL-221ENST00000608903 TOPORSQ9NS56 1045 aaPredicted RBP12.59□□□□□ -0.39
CTCFL-221ENST00000608903 PCDH10Q9P2E7 1040 aa12.59□□□□□ -0.39
CTCFL-221ENST00000608903 NOD1Q9Y239 953 aa12.59□□□□□ -0.39
CTCFL-221ENST00000608903 FRMD4BQ9Y2L6 1034 aa12.59□□□□□ -0.39
CTCFL-221ENST00000608903 MAPK13O15264 365 aa12.58□□□□□ -0.4
CTCFL-221ENST00000608903 CYP24A1Q07973 514 aa12.58□□□□□ -0.4
CTCFL-221ENST00000608903 PPP3CAQ08209 521 aa12.58□□□□□ -0.4
CTCFL-221ENST00000608903 LPIN1Q14693 890 aa12.58□□□□□ -0.4
CTCFL-221ENST00000608903 ZNF568Q3ZCX4 644 aa12.58□□□□□ -0.4
CTCFL-221ENST00000608903 TRIM60Q495X7 471 aa12.58□□□□□ -0.4
CTCFL-221ENST00000608903 FBXO47Q5MNV8 452 aa12.58□□□□□ -0.4
CTCFL-221ENST00000608903 DPY19L2P1Q6NXN4 242 aa12.58□□□□□ -0.4
CTCFL-221ENST00000608903 RSPH3Q86UC2 560 aa12.58□□□□□ -0.4
CTCFL-221ENST00000608903 VSTM4Q8IW00 320 aa12.58□□□□□ -0.4
CTCFL-221ENST00000608903 THNSL1Q8IYQ7 743 aa12.58□□□□□ -0.4
CTCFL-221ENST00000608903 TMEM130Q8N3G9 435 aa12.58□□□□□ -0.4
CTCFL-221ENST00000608903 ZNF516Q92618 1163 aa12.58□□□□□ -0.4
CTCFL-221ENST00000608903 TCHPQ9BT92 498 aa12.58□□□□□ -0.4
CTCFL-221ENST00000608903 AGPAT5Q9NUQ2 364 aa12.58□□□□□ -0.4
CTCFL-221ENST00000608903 ST3GAL5Q9UNP4 418 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms