RNA–Protein interactions for RNA: ENST00000604187.1

PDLIM1P1-201, Transcript of PDZ and LIM domain 1 pseudogene 1, humanhuman

BASIC

Gene PDLIM1P1, Length 969 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1P1-201ENST00000604187 UBN1Q9NPG3 1134 aa13.18□□□□□ -0.3
PDLIM1P1-201ENST00000604187 NAP1L2Q9ULW6 460 aaPredicted RBP13.18□□□□□ -0.3
PDLIM1P1-201ENST00000604187 COL4A3Q01955 1670 aa13.18□□□□□ -0.3
PDLIM1P1-201ENST00000604187 TBC1D4O60343 1298 aa13.17□□□□□ -0.3
PDLIM1P1-201ENST00000604187 SRGAP2CP0DJJ0 459 aa13.17□□□□□ -0.3
PDLIM1P1-201ENST00000604187 TARSP26639 723 aaKnown RBP13.17□□□□□ -0.3
PDLIM1P1-201ENST00000604187 GNA11P29992 359 aa13.17□□□□□ -0.3
PDLIM1P1-201ENST00000604187 PFKPQ01813 784 aa13.17□□□□□ -0.3
PDLIM1P1-201ENST00000604187 CREMQ03060 361 aa13.17□□□□□ -0.3
PDLIM1P1-201ENST00000604187 LPAL2Q16609 132 aa13.17□□□□□ -0.3
PDLIM1P1-201ENST00000604187 USP41Q3LFD5 358 aa13.17□□□□□ -0.3
PDLIM1P1-201ENST00000604187 LIN9Q5TKA1 542 aa13.17□□□□□ -0.3
PDLIM1P1-201ENST00000604187 FUT10Q6P4F1 479 aa13.17□□□□□ -0.3
PDLIM1P1-201ENST00000604187 TPRG1Q6ZUI0 275 aa13.17□□□□□ -0.3
PDLIM1P1-201ENST00000604187 ANO5Q75V66 913 aa13.17□□□□□ -0.3
PDLIM1P1-201ENST00000604187 RDM1Q8NG50 284 aa13.17□□□□□ -0.3
PDLIM1P1-201ENST00000604187 PRPF31Q8WWY3 499 aaKnown RBP13.17□□□□□ -0.3
PDLIM1P1-201ENST00000604187 JPH2Q9BR39 696 aaPredicted RBP13.17□□□□□ -0.3
PDLIM1P1-201ENST00000604187 COLEC11Q9BWP8 271 aa13.17□□□□□ -0.3
PDLIM1P1-201ENST00000604187 EIF2AQ9BY44 585 aaKnown RBP13.17□□□□□ -0.3
PDLIM1P1-201ENST00000604187 PRMT8Q9NR22 394 aaPredicted RBP13.17□□□□□ -0.3
PDLIM1P1-201ENST00000604187 FNIP2Q9P278 1114 aa13.17□□□□□ -0.3
PDLIM1P1-201ENST00000604187 HES2Q9Y543 173 aa13.17□□□□□ -0.3
PDLIM1P1-201ENST00000604187 IPPQ9Y573 584 aa13.17□□□□□ -0.3
PDLIM1P1-201ENST00000604187 EDIL3O43854 480 aa13.16□□□□□ -0.3
PDLIM1P1-201ENST00000604187 PSMD10O75832 226 aa13.16□□□□□ -0.3
PDLIM1P1-201ENST00000604187 ADD1P35611 737 aaKnown RBP13.16□□□□□ -0.3
PDLIM1P1-201ENST00000604187 SPEM2Q0P670 501 aa13.16□□□□□ -0.3
PDLIM1P1-201ENST00000604187 NECTIN1Q15223 517 aa13.16□□□□□ -0.3
PDLIM1P1-201ENST00000604187 RSPO2Q6UXX9 243 aaPredicted RBP13.16□□□□□ -0.3
PDLIM1P1-201ENST00000604187 SRGAP1Q7Z6B7 1085 aa13.16□□□□□ -0.3
PDLIM1P1-201ENST00000604187 CNNM3Q8NE01 707 aa13.16□□□□□ -0.3
PDLIM1P1-201ENST00000604187 ITFG1Q8TB96 612 aa13.16□□□□□ -0.3
PDLIM1P1-201ENST00000604187 SLC7A3Q8WY07 619 aa13.16□□□□□ -0.3
PDLIM1P1-201ENST00000604187 RABGGTAQ92696 567 aa13.16□□□□□ -0.3
PDLIM1P1-201ENST00000604187 TMEM143Q96AN5 459 aa13.16□□□□□ -0.3
PDLIM1P1-201ENST00000604187 CLDN23Q96B33 292 aa13.16□□□□□ -0.3
PDLIM1P1-201ENST00000604187 MBOAT7Q96N66 472 aa13.16□□□□□ -0.3
PDLIM1P1-201ENST00000604187 PHF20Q9BVI0 1012 aa13.16□□□□□ -0.3
PDLIM1P1-201ENST00000604187 APOL6Q9BWW8 343 aa13.16□□□□□ -0.3
PDLIM1P1-201ENST00000604187 ANO2Q9NQ90 1003 aa13.16□□□□□ -0.3
PDLIM1P1-201ENST00000604187 FBXW11Q9UKB1 542 aa13.16□□□□□ -0.3
PDLIM1P1-201ENST00000604187 POLIQ9UNA4 740 aa13.16□□□□□ -0.3
PDLIM1P1-201ENST00000604187 DYNC1LI1Q9Y6G9 523 aaKnown RBP13.16□□□□□ -0.3
PDLIM1P1-201ENST00000604187 CACNA1IQ9P0X4 2223 aa13.16□□□□□ -0.3
PDLIM1P1-201ENST00000604187 CCL16O15467 120 aa13.15□□□□□ -0.3
PDLIM1P1-201ENST00000604187 ERLIN2O94905 339 aa13.15□□□□□ -0.3
PDLIM1P1-201ENST00000604187 HNRNPA1P09651 372 aaKnown RBP eCLIP13.15□□□□□ -0.3
PDLIM1P1-201ENST00000604187 NPEPPSP55786 919 aa13.15□□□□□ -0.3
PDLIM1P1-201ENST00000604187 EXOSC10Q01780 885 aaKnown RBP13.15□□□□□ -0.3
PDLIM1P1-201ENST00000604187 LAMTOR4Q0VGL1 99 aa13.15□□□□□ -0.3
PDLIM1P1-201ENST00000604187 MTAPQ13126 283 aa13.15□□□□□ -0.3
PDLIM1P1-201ENST00000604187 RTP2Q5QGT7 225 aa13.15□□□□□ -0.3
PDLIM1P1-201ENST00000604187 PPM1LQ5SGD2 360 aa13.15□□□□□ -0.3
PDLIM1P1-201ENST00000604187 PRSS55Q6UWB4 352 aaPredicted RBP13.15□□□□□ -0.3
PDLIM1P1-201ENST00000604187 GPR65Q8IYL9 337 aa13.15□□□□□ -0.3
PDLIM1P1-201ENST00000604187 ZNF579Q8NAF0 562 aaKnown RBP13.15□□□□□ -0.3
PDLIM1P1-201ENST00000604187 BICD2Q8TD16 824 aa13.15□□□□□ -0.3
PDLIM1P1-201ENST00000604187 NETO1Q8TDF5 533 aa13.15□□□□□ -0.3
PDLIM1P1-201ENST00000604187 PSPC1Q8WXF1 523 aaKnown RBP13.15□□□□□ -0.3
PDLIM1P1-201ENST00000604187 BMP2KQ9NSY1 1161 aaPredicted RBP13.15□□□□□ -0.3
PDLIM1P1-201ENST00000604187 MIOSQ9NXC5 875 aa13.15□□□□□ -0.3
PDLIM1P1-201ENST00000604187 RALYQ9UKM9 306 aaKnown RBP13.15□□□□□ -0.3
PDLIM1P1-201ENST00000604187 ADAM28Q9UKQ2 775 aa13.15□□□□□ -0.3
PDLIM1P1-201ENST00000604187 RAB23Q9ULC3 237 aa13.15□□□□□ -0.3
PDLIM1P1-201ENST00000604187 FAM208BQ5VWN6 2430 aa13.15□□□□□ -0.3
PDLIM1P1-201ENST00000604187 EVPLQ92817 2033 aa13.14□□□□□ -0.31
PDLIM1P1-201ENST00000604187 LOC105378220A0A1B0GUY1 285 aaPredicted RBP13.14□□□□□ -0.31
PDLIM1P1-201ENST00000604187 SLC30A4O14863 429 aa13.14□□□□□ -0.31
PDLIM1P1-201ENST00000604187 NCAM2O15394 837 aa13.14□□□□□ -0.31
PDLIM1P1-201ENST00000604187 TSPAN1O60635 241 aa13.14□□□□□ -0.31
PDLIM1P1-201ENST00000604187 XYLBO75191 536 aa13.14□□□□□ -0.31
PDLIM1P1-201ENST00000604187 TDP2O95551 362 aa13.14□□□□□ -0.31
PDLIM1P1-201ENST00000604187 C8AP07357 584 aa13.14□□□□□ -0.31
PDLIM1P1-201ENST00000604187 RPS9P46781 194 aaKnown RBP13.14□□□□□ -0.31
PDLIM1P1-201ENST00000604187 USP11P51784 963 aa13.14□□□□□ -0.31
PDLIM1P1-201ENST00000604187 RCAN1P53805 252 aa13.14□□□□□ -0.31
PDLIM1P1-201ENST00000604187 PSMC5P62195 406 aa13.14□□□□□ -0.31
PDLIM1P1-201ENST00000604187 B3GNT9Q6UX72 402 aa13.14□□□□□ -0.31
PDLIM1P1-201ENST00000604187 ZNF852Q6ZMS4 543 aa13.14□□□□□ -0.31
PDLIM1P1-201ENST00000604187 DHX32Q7L7V1 743 aaKnown RBP13.14□□□□□ -0.31
PDLIM1P1-201ENST00000604187 NPAS3Q8IXF0 933 aa13.14□□□□□ -0.31
PDLIM1P1-201ENST00000604187 RNF149Q8NC42 400 aa13.14□□□□□ -0.31
PDLIM1P1-201ENST00000604187 NELL2Q99435 816 aa13.14□□□□□ -0.31
PDLIM1P1-201ENST00000604187 ESYT1Q9BSJ8 1104 aa13.14□□□□□ -0.31
PDLIM1P1-201ENST00000604187 FAM126AQ9BYI3 521 aaPredicted RBP13.14□□□□□ -0.31
PDLIM1P1-201ENST00000604187 C2orf16Q68DN1 1984 aa13.14□□□□□ -0.31
PDLIM1P1-201ENST00000604187 SF3B1O75533 1304 aaKnown RBP eCLIP13.13□□□□□ -0.31
PDLIM1P1-201ENST00000604187 CCDC196A0A1B0GTZ2 297 aa13.13□□□□□ -0.31
PDLIM1P1-201ENST00000604187 Q4G0T1 1027 aa13.13□□□□□ -0.31
PDLIM1P1-201ENST00000604187 RNF20Q5VTR2 975 aa13.13□□□□□ -0.31
PDLIM1P1-201ENST00000604187 LAIR1Q6GTX8 287 aa13.13□□□□□ -0.31
PDLIM1P1-201ENST00000604187 NOTUMQ6P988 496 aa13.13□□□□□ -0.31
PDLIM1P1-201ENST00000604187 CCDC148Q8NFR7 591 aa13.13□□□□□ -0.31
PDLIM1P1-201ENST00000604187 TBCKQ8TEA7 893 aa13.13□□□□□ -0.31
PDLIM1P1-201ENST00000604187 ING5Q8WYH8 240 aa13.13□□□□□ -0.31
PDLIM1P1-201ENST00000604187 CCDC51Q96ER9 411 aa13.13□□□□□ -0.31
PDLIM1P1-201ENST00000604187 CPB2Q96IY4 423 aa13.13□□□□□ -0.31
PDLIM1P1-201ENST00000604187 CEP170P1Q96L14 293 aa13.13□□□□□ -0.31
PDLIM1P1-201ENST00000604187 NXF3Q9H4D5 531 aaKnown RBP13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms