RNA–Protein interactions for RNA: ENST00000597146.1

LIG1-214, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 589 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-214ENST00000597146 HEBP1Q9NRV9 189 aa17.36■□□□□ 0.37
LIG1-214ENST00000597146 BARHL2Q9NY43 387 aa17.36■□□□□ 0.37
LIG1-214ENST00000597146 VWA8A3KMH1 1905 aa17.36■□□□□ 0.37
LIG1-214ENST00000597146 CCL16O15467 120 aa17.35■□□□□ 0.37
LIG1-214ENST00000597146 MLH1P40692 756 aa17.35■□□□□ 0.37
LIG1-214ENST00000597146 LIFRP42702 1097 aa17.35■□□□□ 0.37
LIG1-214ENST00000597146 SCNN1GP51170 649 aa17.35■□□□□ 0.37
LIG1-214ENST00000597146 CDC42EP1Q00587 391 aa17.35■□□□□ 0.37
LIG1-214ENST00000597146 DSC1Q08554 894 aa17.35■□□□□ 0.37
LIG1-214ENST00000597146 FUT2Q10981 343 aa17.35■□□□□ 0.37
LIG1-214ENST00000597146 PRSS55Q6UWB4 352 aaPredicted RBP17.35■□□□□ 0.37
LIG1-214ENST00000597146 SMG8Q8ND04 991 aaKnown RBP17.35■□□□□ 0.37
LIG1-214ENST00000597146 GJA10Q969M2 543 aa17.35■□□□□ 0.37
LIG1-214ENST00000597146 MBOAT7Q96N66 472 aa17.35■□□□□ 0.37
LIG1-214ENST00000597146 GAD1Q99259 594 aa17.35■□□□□ 0.37
LIG1-214ENST00000597146 IFT122Q9HBG6 1241 aa17.35■□□□□ 0.37
LIG1-214ENST00000597146 FBXW11Q9UKB1 542 aa17.35■□□□□ 0.37
LIG1-214ENST00000597146 V9GY48 417 aaPredicted RBP17.35■□□□□ 0.37
LIG1-214ENST00000597146 ARID2Q68CP9 1835 aa17.35■□□□□ 0.37
LIG1-214ENST00000597146 PDCD11Q14690 1871 aaKnown RBP17.35■□□□□ 0.37
LIG1-214ENST00000597146 NCAM2O15394 837 aa17.34■□□□□ 0.37
LIG1-214ENST00000597146 LRP3O75074 770 aa17.34■□□□□ 0.37
LIG1-214ENST00000597146 DNM2P50570 870 aa17.34■□□□□ 0.37
LIG1-214ENST00000597146 ADCY1Q08828 1119 aa17.34■□□□□ 0.37
LIG1-214ENST00000597146 CSRP2Q16527 193 aa17.34■□□□□ 0.37
LIG1-214ENST00000597146 FUT10Q6P4F1 479 aa17.34■□□□□ 0.37
LIG1-214ENST00000597146 ING5Q8WYH8 240 aa17.34■□□□□ 0.37
LIG1-214ENST00000597146 RABGGTAQ92696 567 aa17.34■□□□□ 0.37
LIG1-214ENST00000597146 ZFP42Q96MM3 310 aa17.34■□□□□ 0.37
LIG1-214ENST00000597146 LSG1Q9H089 658 aaKnown RBP17.34■□□□□ 0.37
LIG1-214ENST00000597146 UNC45AQ9H3U1 944 aa17.34■□□□□ 0.37
LIG1-214ENST00000597146 MINDY3Q9H8M7 445 aa17.34■□□□□ 0.37
LIG1-214ENST00000597146 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP17.34■□□□□ 0.373e-7■□□□□ 10.4
LIG1-214ENST00000597146 MIOSQ9NXC5 875 aa17.34■□□□□ 0.37
LIG1-214ENST00000597146 FNIP2Q9P278 1114 aa17.34■□□□□ 0.37
LIG1-214ENST00000597146 NDRG2Q9UN36 371 aaKnown RBP17.34■□□□□ 0.37
LIG1-214ENST00000597146 POLIQ9UNA4 740 aa17.34■□□□□ 0.37
LIG1-214ENST00000597146 WDFY3Q8IZQ1 3526 aa17.34■□□□□ 0.37
LIG1-214ENST00000597146 SETXQ7Z333 2677 aaKnown RBP17.33■□□□□ 0.36
LIG1-214ENST00000597146 ARL5CA6NH57 179 aa17.33■□□□□ 0.36
LIG1-214ENST00000597146 hCG_1984214I3L0E3 225 aa17.33■□□□□ 0.36
LIG1-214ENST00000597146 SLC27A2O14975 620 aa17.33■□□□□ 0.36
LIG1-214ENST00000597146 STBD1O95210 358 aa17.33■□□□□ 0.36
LIG1-214ENST00000597146 C1RP00736 705 aa17.33■□□□□ 0.36
LIG1-214ENST00000597146 ITGA4P13612 1032 aa17.33■□□□□ 0.36
LIG1-214ENST00000597146 NCLP19338 710 aaKnown RBP17.33■□□□□ 0.36
LIG1-214ENST00000597146 HOXA11P31270 313 aaPredicted RBP17.33■□□□□ 0.36
LIG1-214ENST00000597146 SHC2P98077 582 aa17.33■□□□□ 0.36
LIG1-214ENST00000597146 SRSF5Q13243 272 aaKnown RBP17.33■□□□□ 0.36
LIG1-214ENST00000597146 USP41Q3LFD5 358 aa17.33■□□□□ 0.36
LIG1-214ENST00000597146 CREB3L3Q68CJ9 461 aa17.33■□□□□ 0.36
LIG1-214ENST00000597146 ZNF852Q6ZMS4 543 aa17.33■□□□□ 0.36
LIG1-214ENST00000597146 SYNE3Q6ZMZ3 975 aa17.33■□□□□ 0.36
LIG1-214ENST00000597146 NPAS3Q8IXF0 933 aa17.33■□□□□ 0.36
LIG1-214ENST00000597146 CELF5Q8N6W0 485 aaKnown RBP17.33■□□□□ 0.36
LIG1-214ENST00000597146 ZNF713Q8N859 430 aaPredicted RBP17.33■□□□□ 0.36
LIG1-214ENST00000597146 NELL2Q99435 816 aa17.33■□□□□ 0.36
LIG1-214ENST00000597146 NIFKQ9BYG3 293 aaKnown RBP17.33■□□□□ 0.36
LIG1-214ENST00000597146 PLA2G2FQ9BZM2 168 aa17.33■□□□□ 0.36
LIG1-214ENST00000597146 GLT8D2Q9H1C3 349 aa17.33■□□□□ 0.36
LIG1-214ENST00000597146 RNF39Q9H2S5 420 aa17.33■□□□□ 0.36
LIG1-214ENST00000597146 CHRDQ9H2X0 955 aa17.33■□□□□ 0.36
LIG1-214ENST00000597146 HCFC1R1Q9NWW0 138 aa17.33■□□□□ 0.36
LIG1-214ENST00000597146 CACNG4Q9UBN1 327 aa17.33■□□□□ 0.36
LIG1-214ENST00000597146 SPAG17Q6Q759 2223 aa17.33■□□□□ 0.36
LIG1-214ENST00000597146 SDK1Q7Z5N4 2213 aa17.33■□□□□ 0.36
LIG1-214ENST00000597146 AKAP13Q12802 2813 aa17.32■□□□□ 0.36
LIG1-214ENST00000597146 MSH4O15457 936 aa17.32■□□□□ 0.36
LIG1-214ENST00000597146 C8AP07357 584 aa17.32■□□□□ 0.36
LIG1-214ENST00000597146 SIM2Q14190 667 aaPredicted RBP17.32■□□□□ 0.36
LIG1-214ENST00000597146 RTP2Q5QGT7 225 aa17.32■□□□□ 0.36
LIG1-214ENST00000597146 PPM1LQ5SGD2 360 aa17.32■□□□□ 0.36
LIG1-214ENST00000597146 LIN9Q5TKA1 542 aa17.32■□□□□ 0.36
LIG1-214ENST00000597146 ARHGAP30Q7Z6I6 1101 aaPredicted RBP17.32■□□□□ 0.36
LIG1-214ENST00000597146 ZNF687Q8N1G0 1237 aa17.32■□□□□ 0.36
LIG1-214ENST00000597146 EIF2AQ9BY44 585 aaKnown RBP17.32■□□□□ 0.36
LIG1-214ENST00000597146 HES2Q9Y543 173 aa17.32■□□□□ 0.36
LIG1-214ENST00000597146 IPPQ9Y573 584 aa17.32■□□□□ 0.36
LIG1-214ENST00000597146 LAMA1P25391 3075 aa17.32■□□□□ 0.36
LIG1-214ENST00000597146 GAS7O60861 476 aa17.31■□□□□ 0.36
LIG1-214ENST00000597146 MAFO75444 373 aaPredicted RBP17.31■□□□□ 0.36
LIG1-214ENST00000597146 PROS1P07225 676 aa17.31■□□□□ 0.36
LIG1-214ENST00000597146 HNRNPA1P09651 372 aaKnown RBP eCLIP17.31■□□□□ 0.36
LIG1-214ENST00000597146 JAK3P52333 1124 aa17.31■□□□□ 0.36
LIG1-214ENST00000597146 NRLP54845 237 aa17.31■□□□□ 0.36
LIG1-214ENST00000597146 XKR3Q5GH77 459 aa17.31■□□□□ 0.36
LIG1-214ENST00000597146 PLA2G4FQ68DD2 849 aa17.31■□□□□ 0.36
LIG1-214ENST00000597146 IL31Q6EBC2 164 aa17.31■□□□□ 0.36
LIG1-214ENST00000597146 APOA5Q6Q788 366 aa17.31■□□□□ 0.36
LIG1-214ENST00000597146 SGMS1Q86VZ5 419 aa17.31■□□□□ 0.36
LIG1-214ENST00000597146 DDX1Q92499 740 aaKnown RBP17.31■□□□□ 0.36
LIG1-214ENST00000597146 COLEC11Q9BWP8 271 aa17.31■□□□□ 0.36
LIG1-214ENST00000597146 RBM28Q9NW13 759 aaKnown RBP17.31■□□□□ 0.36
LIG1-214ENST00000597146 PPP4R2Q9NY27 417 aa17.31■□□□□ 0.36
LIG1-214ENST00000597146 MRPS17Q9Y2R5 130 aaKnown RBP17.31■□□□□ 0.36
LIG1-214ENST00000597146 COL4A3BPQ9Y5P4 624 aa17.31■□□□□ 0.36
LIG1-214ENST00000597146 NBEAQ8NFP9 2946 aa17.3■□□□□ 0.36
LIG1-214ENST00000597146 C1QTNF9BB2RNN3 333 aa17.3■□□□□ 0.36
LIG1-214ENST00000597146 C1QTNF9P0C862 333 aa17.3■□□□□ 0.36
LIG1-214ENST00000597146 SFNP31947 248 aa17.3■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms