RNA–Protein interactions for RNA: ENST00000594828.7

LSM4-204, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM4, Length 807 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-204ENST00000594828 ACKR2O00590 384 aa25.92■■□□□ 1.74
LSM4-204ENST00000594828 N4BP3O15049 544 aa25.92■■□□□ 1.74
LSM4-204ENST00000594828 PRKCBP05771 671 aa25.92■■□□□ 1.74
LSM4-204ENST00000594828 LIG1P18858 919 aa25.92■■□□□ 1.74
LSM4-204ENST00000594828 CDC25AP30304 524 aa25.92■■□□□ 1.74
LSM4-204ENST00000594828 ITIH3Q06033 890 aa25.92■■□□□ 1.74
LSM4-204ENST00000594828 PPFIBP1Q86W92 1011 aa25.92■■□□□ 1.74
LSM4-204ENST00000594828 GSTCDQ8NEC7 633 aa25.92■■□□□ 1.74
LSM4-204ENST00000594828 SLC22A17Q8WUG5 538 aa25.92■■□□□ 1.74
LSM4-204ENST00000594828 EMILIN2Q9BXX0 1053 aa25.92■■□□□ 1.74
LSM4-204ENST00000594828 CCDC113Q9H0I3 377 aa25.92■■□□□ 1.74
LSM4-204ENST00000594828 ADAM7Q9H2U9 754 aa25.92■■□□□ 1.74
LSM4-204ENST00000594828 MRPL17Q9NRX2 175 aaKnown RBP25.92■■□□□ 1.74
LSM4-204ENST00000594828 MARCH5Q9NX47 278 aa25.92■■□□□ 1.74
LSM4-204ENST00000594828 ZSCAN21Q9Y5A6 473 aaPredicted RBP25.92■■□□□ 1.74
LSM4-204ENST00000594828 SOD2P04179 222 aa25.91■■□□□ 1.74
LSM4-204ENST00000594828 EPCAMP16422 314 aa25.91■■□□□ 1.74
LSM4-204ENST00000594828 KLHL5Q96PQ7 755 aa25.91■■□□□ 1.74
LSM4-204ENST00000594828 COLEC11Q9BWP8 271 aa25.91■■□□□ 1.74
LSM4-204ENST00000594828 PDZD7Q9H5P4 517 aa25.91■■□□□ 1.74
LSM4-204ENST00000594828 DZANK1Q9NVP4 752 aa25.91■■□□□ 1.74
LSM4-204ENST00000594828 LILRB3O75022 631 aa25.9■■□□□ 1.74
LSM4-204ENST00000594828 KLRC2P26717 231 aa25.9■■□□□ 1.74
LSM4-204ENST00000594828 EFNA5P52803 228 aa25.9■■□□□ 1.74
LSM4-204ENST00000594828 ATP2C1P98194 919 aaPredicted RBP25.9■■□□□ 1.74
LSM4-204ENST00000594828 GRIK3Q13003 919 aa25.9■■□□□ 1.74
LSM4-204ENST00000594828 RPS6KC1Q96S38 1066 aa25.9■■□□□ 1.74
LSM4-204ENST00000594828 ADPGKQ9BRR6 497 aa25.9■■□□□ 1.74
LSM4-204ENST00000594828 KIFC3Q9BVG8 833 aa25.9■■□□□ 1.74
LSM4-204ENST00000594828 SSX2IPQ9Y2D8 614 aa25.9■■□□□ 1.74
LSM4-204ENST00000594828 USP20Q9Y2K6 914 aa25.9■■□□□ 1.74
LSM4-204ENST00000594828 ZMYM2Q9UBW7 1377 aa25.9■■□□□ 1.74
LSM4-204ENST00000594828 C2CD2LO14523 706 aa25.89■■□□□ 1.74
LSM4-204ENST00000594828 URODP06132 367 aa25.89■■□□□ 1.74
LSM4-204ENST00000594828 CNPP09543 421 aaKnown RBP25.89■■□□□ 1.74
LSM4-204ENST00000594828 RARS2Q5T160 578 aaKnown RBP25.89■■□□□ 1.74
LSM4-204ENST00000594828 LARP1BQ659C4 914 aaKnown RBP25.89■■□□□ 1.74
LSM4-204ENST00000594828 TAS1R1Q7RTX1 841 aa25.89■■□□□ 1.74
LSM4-204ENST00000594828 C12orf76Q8N812 135 aaPredicted RBP25.89■■□□□ 1.74
LSM4-204ENST00000594828 NECTIN4Q96NY8 510 aa25.89■■□□□ 1.74
LSM4-204ENST00000594828 MMTAG2Q9BU76 263 aaKnown RBP25.89■■□□□ 1.74
LSM4-204ENST00000594828 HERC2P3Q9BVR0 1158 aa25.89■■□□□ 1.74
LSM4-204ENST00000594828 CDH22Q9UJ99 828 aa25.89■■□□□ 1.74
LSM4-204ENST00000594828 HCN4Q9Y3Q4 1203 aa25.89■■□□□ 1.74
LSM4-204ENST00000594828 ZRSR1Q15695 479 aaKnown RBP25.88■■□□□ 1.73
LSM4-204ENST00000594828 CABP7Q86V35 215 aa25.88■■□□□ 1.73
LSM4-204ENST00000594828 SNTG2Q9NY99 539 aa25.88■■□□□ 1.73
LSM4-204ENST00000594828 TDRD15B5MCY1 1934 aaKnown RBP25.87■■□□□ 1.73
LSM4-204ENST00000594828 K7ERI5 159 aa25.87■■□□□ 1.73
LSM4-204ENST00000594828 EFEMP2O95967 443 aa25.87■■□□□ 1.73
LSM4-204ENST00000594828 EDN1P05305 212 aa25.87■■□□□ 1.73
LSM4-204ENST00000594828 MTHFRP42898 656 aa25.87■■□□□ 1.73
LSM4-204ENST00000594828 RNF168Q8IYW5 571 aaPredicted RBP25.87■■□□□ 1.73
LSM4-204ENST00000594828 EDAQ92838 391 aa25.87■■□□□ 1.73
LSM4-204ENST00000594828 RIPOR3Q96MK2 946 aa25.87■■□□□ 1.73
LSM4-204ENST00000594828 DAXXQ9UER7 740 aaPredicted RBP25.87■■□□□ 1.73
LSM4-204ENST00000594828 VWA3AA6NCI4 1184 aa25.86■■□□□ 1.73
LSM4-204ENST00000594828 CCDC169A6NNP5 214 aa25.86■■□□□ 1.73
LSM4-204ENST00000594828 F8W810 466 aa25.86■■□□□ 1.73
LSM4-204ENST00000594828 GLUD2P49448 558 aa25.86■■□□□ 1.73
LSM4-204ENST00000594828 CLCN4P51793 760 aa25.86■■□□□ 1.73
LSM4-204ENST00000594828 PEX3P56589 373 aa25.86■■□□□ 1.73
LSM4-204ENST00000594828 ATAT1Q5SQI0 421 aa25.86■■□□□ 1.73
LSM4-204ENST00000594828 KIAA0319Q5VV43 1072 aa25.86■■□□□ 1.73
LSM4-204ENST00000594828 EEF1DP3Q658K8 133 aa25.86■■□□□ 1.73
LSM4-204ENST00000594828 ARL6IP4Q66PJ3 421 aaKnown RBP25.86■■□□□ 1.73
LSM4-204ENST00000594828 KIAA1841Q6NSI8 718 aa25.86■■□□□ 1.73
LSM4-204ENST00000594828 RINT1Q6NUQ1 792 aa25.86■■□□□ 1.73
LSM4-204ENST00000594828 KANK3Q6NY19 840 aa25.86■■□□□ 1.73
LSM4-204ENST00000594828 KCNK18Q7Z418 384 aa25.86■■□□□ 1.73
LSM4-204ENST00000594828 FBXL18Q96ME1 805 aa25.86■■□□□ 1.73
LSM4-204ENST00000594828 RUSC1Q9BVN2 902 aa25.86■■□□□ 1.73
LSM4-204ENST00000594828 POMKQ9H5K3 350 aa25.86■■□□□ 1.73
LSM4-204ENST00000594828 NR2E1Q9Y466 385 aa25.86■■□□□ 1.73
LSM4-204ENST00000594828 SPDYE4A6NLX3 237 aa25.85■■□□□ 1.73
LSM4-204ENST00000594828 HIP1RO75146 1068 aa25.85■■□□□ 1.73
LSM4-204ENST00000594828 RECQL4O94761 1208 aa25.85■■□□□ 1.73
LSM4-204ENST00000594828 WEE2P0C1S8 567 aa25.85■■□□□ 1.73
LSM4-204ENST00000594828 SP100P23497 879 aaPredicted RBP25.85■■□□□ 1.73
LSM4-204ENST00000594828 NPTX2P47972 431 aa25.85■■□□□ 1.73
LSM4-204ENST00000594828 DCAF4L1Q3SXM0 396 aa25.85■■□□□ 1.73
LSM4-204ENST00000594828 NT5DC1Q5TFE4 455 aa25.85■■□□□ 1.73
LSM4-204ENST00000594828 ATF7IP2Q5U623 682 aa25.85■■□□□ 1.73
LSM4-204ENST00000594828 C1orf186Q6ZWK4 172 aa25.85■■□□□ 1.73
LSM4-204ENST00000594828 DAW1Q8N136 415 aa25.85■■□□□ 1.73
LSM4-204ENST00000594828 RABGGTAQ92696 567 aa25.85■■□□□ 1.73
LSM4-204ENST00000594828 DRC1Q96MC2 740 aa25.85■■□□□ 1.73
LSM4-204ENST00000594828 TSHZ2Q9NRE2 1034 aa25.85■■□□□ 1.73
LSM4-204ENST00000594828 ADAM28Q9UKQ2 775 aa25.85■■□□□ 1.73
LSM4-204ENST00000594828 TADA2AO75478 443 aa25.84■■□□□ 1.73
LSM4-204ENST00000594828 THP07101 528 aa25.84■■□□□ 1.73
LSM4-204ENST00000594828 DSG1Q02413 1049 aa25.84■■□□□ 1.73
LSM4-204ENST00000594828 DMP1Q13316 513 aaPredicted RBP25.84■■□□□ 1.73
LSM4-204ENST00000594828 TUSC3Q13454 348 aa25.84■■□□□ 1.73
LSM4-204ENST00000594828 HYIQ5T013 277 aa25.84■■□□□ 1.73
LSM4-204ENST00000594828 FUT10Q6P4F1 479 aa25.84■■□□□ 1.73
LSM4-204ENST00000594828 TMC5Q6UXY8 1006 aa25.84■■□□□ 1.73
LSM4-204ENST00000594828 APBB1IPQ7Z5R6 666 aaPredicted RBP25.84■■□□□ 1.73
LSM4-204ENST00000594828 KCTD17Q8N5Z5 321 aa25.84■■□□□ 1.73
LSM4-204ENST00000594828 GPR62Q9BZJ7 368 aa25.84■■□□□ 1.73
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms