RNA–Protein interactions for RNA: ENST00000585031.2

TOP3A-220, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 4

Gene TOP3A, Length 575 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-220ENST00000585031 ZFP37Q9Y6Q3 630 aaPredicted RBP20.26■□□□□ 0.83
TOP3A-220ENST00000585031 FRYQ5TBA9 3013 aa20.26■□□□□ 0.83
TOP3A-220ENST00000585031 SHISA7A6NL88 538 aa20.25■□□□□ 0.83
TOP3A-220ENST00000585031 ZMYND10O75800 440 aa20.25■□□□□ 0.83
TOP3A-220ENST00000585031 SRGAP2CP0DJJ0 459 aa20.25■□□□□ 0.83
TOP3A-220ENST00000585031 FSHRP23945 695 aa20.25■□□□□ 0.83
TOP3A-220ENST00000585031 MLH1P40692 756 aa20.25■□□□□ 0.83
TOP3A-220ENST00000585031 MAGEA9P43362 315 aa20.25■□□□□ 0.83
TOP3A-220ENST00000585031 SCNN1GP51170 649 aa20.25■□□□□ 0.83
TOP3A-220ENST00000585031 PRKCQQ04759 706 aa20.25■□□□□ 0.83
TOP3A-220ENST00000585031 FZD5Q13467 585 aa20.25■□□□□ 0.83
TOP3A-220ENST00000585031 UBXN2BQ14CS0 331 aa20.25■□□□□ 0.83
TOP3A-220ENST00000585031 POTEHQ6S545 545 aa20.25■□□□□ 0.83
TOP3A-220ENST00000585031 DHX32Q7L7V1 743 aaKnown RBP20.25■□□□□ 0.83
TOP3A-220ENST00000585031 PRPF31Q8WWY3 499 aaKnown RBP20.25■□□□□ 0.83
TOP3A-220ENST00000585031 TMEM143Q96AN5 459 aa20.25■□□□□ 0.83
TOP3A-220ENST00000585031 CHAMP1Q96JM3 812 aa20.25■□□□□ 0.83
TOP3A-220ENST00000585031 MBOAT7Q96N66 472 aa20.25■□□□□ 0.83
TOP3A-220ENST00000585031 WRAP73Q9P2S5 460 aaPredicted RBP20.25■□□□□ 0.83
TOP3A-220ENST00000585031 CACNG4Q9UBN1 327 aa20.25■□□□□ 0.83
TOP3A-220ENST00000585031 USP18Q9UMW8 372 aa20.25■□□□□ 0.83
TOP3A-220ENST00000585031 IPPQ9Y573 584 aa20.25■□□□□ 0.83
TOP3A-220ENST00000585031 PRSS55Q6UWB4 352 aaPredicted RBP20.24■□□□□ 0.83
TOP3A-220ENST00000585031 RSPO2Q6UXX9 243 aaPredicted RBP20.24■□□□□ 0.83
TOP3A-220ENST00000585031 GSTCDQ8NEC7 633 aa20.24■□□□□ 0.83
TOP3A-220ENST00000585031 RDM1Q8NG50 284 aa20.24■□□□□ 0.83
TOP3A-220ENST00000585031 ITFG1Q8TB96 612 aa20.24■□□□□ 0.83
TOP3A-220ENST00000585031 PHKBQ93100 1093 aa20.24■□□□□ 0.83
TOP3A-220ENST00000585031 CLDN23Q96B33 292 aa20.24■□□□□ 0.83
TOP3A-220ENST00000585031 LTB4R2Q9NPC1 389 aa20.24■□□□□ 0.83
TOP3A-220ENST00000585031 FNIP2Q9P278 1114 aa20.24■□□□□ 0.83
TOP3A-220ENST00000585031 CDH7Q9ULB5 785 aa20.24■□□□□ 0.83
TOP3A-220ENST00000585031 VWA8A3KMH1 1905 aa20.23■□□□□ 0.83
TOP3A-220ENST00000585031 ARID2Q68CP9 1835 aa20.23■□□□□ 0.83
TOP3A-220ENST00000585031 EML1O00423 815 aa20.23■□□□□ 0.83
TOP3A-220ENST00000585031 SLC30A4O14863 429 aa20.23■□□□□ 0.83
TOP3A-220ENST00000585031 PRPF3O43395 683 aaKnown RBP20.23■□□□□ 0.83
TOP3A-220ENST00000585031 TDP2O95551 362 aa20.23■□□□□ 0.83
TOP3A-220ENST00000585031 ITGA4P13612 1032 aa20.23■□□□□ 0.83
TOP3A-220ENST00000585031 CPA1P15085 419 aa20.23■□□□□ 0.83
TOP3A-220ENST00000585031 TARSP26639 723 aaKnown RBP20.23■□□□□ 0.83
TOP3A-220ENST00000585031 USP11P51784 963 aa20.23■□□□□ 0.83
TOP3A-220ENST00000585031 PPM1JQ5JR12 505 aa20.23■□□□□ 0.83
TOP3A-220ENST00000585031 FUT10Q6P4F1 479 aa20.23■□□□□ 0.83
TOP3A-220ENST00000585031 SRGAP1Q7Z6B7 1085 aa20.23■□□□□ 0.83
TOP3A-220ENST00000585031 FGF13Q92913 245 aa20.23■□□□□ 0.83
TOP3A-220ENST00000585031 ANO2Q9NQ90 1003 aa20.23■□□□□ 0.83
TOP3A-220ENST00000585031 BMP2KQ9NSY1 1161 aaPredicted RBP20.23■□□□□ 0.83
TOP3A-220ENST00000585031 CNOT1A5YKK6 2376 aaKnown RBP20.23■□□□□ 0.83
TOP3A-220ENST00000585031 F5P12259 2224 aa20.23■□□□□ 0.83
TOP3A-220ENST00000585031 RALGAPA1Q6GYQ0 2036 aa20.22■□□□□ 0.83
TOP3A-220ENST00000585031 GNA11P29992 359 aa20.22■□□□□ 0.83
TOP3A-220ENST00000585031 LAMTOR4Q0VGL1 99 aa20.22■□□□□ 0.83
TOP3A-220ENST00000585031 Q4G0T1 1027 aa20.22■□□□□ 0.83
TOP3A-220ENST00000585031 CENPQQ7L2Z9 268 aaPredicted RBP20.22■□□□□ 0.83
TOP3A-220ENST00000585031 ETNPPLQ8TBG4 499 aa20.22■□□□□ 0.83
TOP3A-220ENST00000585031 CPB2Q96IY4 423 aa20.22■□□□□ 0.83
TOP3A-220ENST00000585031 KXD1Q9BQD3 176 aa20.22■□□□□ 0.83
TOP3A-220ENST00000585031 VPS54Q9P1Q0 977 aa20.22■□□□□ 0.83
TOP3A-220ENST00000585031 RALYQ9UKM9 306 aaKnown RBP20.22■□□□□ 0.83
TOP3A-220ENST00000585031 NAP1L2Q9ULW6 460 aaPredicted RBP20.22■□□□□ 0.83
TOP3A-220ENST00000585031 FAM208BQ5VWN6 2430 aa20.21■□□□□ 0.83
TOP3A-220ENST00000585031 ADAM12O43184 909 aa20.21■□□□□ 0.83
TOP3A-220ENST00000585031 NTRK3Q16288 839 aa20.21■□□□□ 0.83
TOP3A-220ENST00000585031 USP41Q3LFD5 358 aa20.21■□□□□ 0.83
TOP3A-220ENST00000585031 RTP2Q5QGT7 225 aa20.21■□□□□ 0.83
TOP3A-220ENST00000585031 NETO1Q8TDF5 533 aa20.21■□□□□ 0.83
TOP3A-220ENST00000585031 TBCKQ8TEA7 893 aa20.21■□□□□ 0.83
TOP3A-220ENST00000585031 CLSTN3Q9BQT9 956 aa20.21■□□□□ 0.83
TOP3A-220ENST00000585031 PAAF1Q9BRP4 392 aa20.21■□□□□ 0.83
TOP3A-220ENST00000585031 FAM126AQ9BYI3 521 aaPredicted RBP20.21■□□□□ 0.83
TOP3A-220ENST00000585031 PLA2G2FQ9BZM2 168 aa20.21■□□□□ 0.83
TOP3A-220ENST00000585031 DHX33Q9H6R0 707 aaKnown RBP20.21■□□□□ 0.83
TOP3A-220ENST00000585031 FBXW11Q9UKB1 542 aa20.21■□□□□ 0.83
TOP3A-220ENST00000585031 ZBTB39O15060 712 aa20.2■□□□□ 0.82
TOP3A-220ENST00000585031 TSPAN1O60635 241 aa20.2■□□□□ 0.82
TOP3A-220ENST00000585031 TDGF1P13385 188 aa20.2■□□□□ 0.82
TOP3A-220ENST00000585031 RPS9P46781 194 aaKnown RBP20.2■□□□□ 0.82
TOP3A-220ENST00000585031 RCAN1P53805 252 aa20.2■□□□□ 0.82
TOP3A-220ENST00000585031 ZBTB41Q5SVQ8 909 aa20.2■□□□□ 0.82
TOP3A-220ENST00000585031 GPR65Q8IYL9 337 aa20.2■□□□□ 0.82
TOP3A-220ENST00000585031 CCDC12Q8WUD4 166 aaPredicted RBP20.2■□□□□ 0.82
TOP3A-220ENST00000585031 NELL2Q99435 816 aa20.2■□□□□ 0.82
TOP3A-220ENST00000585031 COLEC11Q9BWP8 271 aa20.2■□□□□ 0.82
TOP3A-220ENST00000585031 APOL6Q9BWW8 343 aa20.2■□□□□ 0.82
TOP3A-220ENST00000585031 UBN1Q9NPG3 1134 aa20.2■□□□□ 0.82
TOP3A-220ENST00000585031 PRMT8Q9NR22 394 aaPredicted RBP20.2■□□□□ 0.82
TOP3A-220ENST00000585031 HCFC1R1Q9NWW0 138 aa20.2■□□□□ 0.82
TOP3A-220ENST00000585031 GMEB2Q9UKD1 530 aa20.2■□□□□ 0.82
TOP3A-220ENST00000585031 ADAM28Q9UKQ2 775 aa20.2■□□□□ 0.82
TOP3A-220ENST00000585031 CYP3A7-CYP3A51PA0A087WV96 503 aa20.19■□□□□ 0.82
TOP3A-220ENST00000585031 CCL16O15467 120 aa20.19■□□□□ 0.82
TOP3A-220ENST00000585031 CYP3A7P24462 503 aa20.19■□□□□ 0.82
TOP3A-220ENST00000585031 PSMC5P62195 406 aa20.19■□□□□ 0.82
TOP3A-220ENST00000585031 LPAL2Q16609 132 aa20.19■□□□□ 0.82
TOP3A-220ENST00000585031 RNF149Q8NC42 400 aa20.19■□□□□ 0.82
TOP3A-220ENST00000585031 NXF3Q9H4D5 531 aaKnown RBP20.19■□□□□ 0.82
TOP3A-220ENST00000585031 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP20.19■□□□□ 0.82
TOP3A-220ENST00000585031 DYNC1LI1Q9Y6G9 523 aaKnown RBP20.19■□□□□ 0.82
TOP3A-220ENST00000585031 AKAP5P24588 427 aa20.18■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms