RNA–Protein interactions for RNA: ENST00000583988.1

PPP4R1-227, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 3

Gene PPP4R1, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-227ENST00000583988 EFCAB2Q5VUJ9 269 aa5.26□□□□□ -1.57
PPP4R1-227ENST00000583988 MBNL2Q5VZF2 373 aaKnown RBP5.26□□□□□ -1.57
PPP4R1-227ENST00000583988 SPTY2D1Q68D10 685 aaPredicted RBP5.26□□□□□ -1.57
PPP4R1-227ENST00000583988 KRT40Q6A162 431 aa5.26□□□□□ -1.57
PPP4R1-227ENST00000583988 BTNL9Q6UXG8 535 aa5.26□□□□□ -1.57
PPP4R1-227ENST00000583988 PNMA8AQ86V59 439 aaPredicted RBP5.26□□□□□ -1.57
PPP4R1-227ENST00000583988 THEMISQ8N1K5 641 aaPredicted RBP5.26□□□□□ -1.57
PPP4R1-227ENST00000583988 NUP88Q99567 741 aaPredicted RBP5.26□□□□□ -1.57
PPP4R1-227ENST00000583988 ING3Q9NXR8 418 aa5.26□□□□□ -1.57
PPP4R1-227ENST00000583988 GIT1Q9Y2X7 761 aa5.26□□□□□ -1.57
PPP4R1-227ENST00000583988 UBE2QL1A1L167 161 aa5.25□□□□□ -1.57
PPP4R1-227ENST00000583988 CYP27B1O15528 508 aa5.25□□□□□ -1.57
PPP4R1-227ENST00000583988 PCDHGA12O60330 932 aa5.25□□□□□ -1.57
PPP4R1-227ENST00000583988 ALDH1A2O94788 518 aa5.25□□□□□ -1.57
PPP4R1-227ENST00000583988 LTA4HP09960 611 aaKnown RBP5.25□□□□□ -1.57
PPP4R1-227ENST00000583988 CTSSP25774 331 aa5.25□□□□□ -1.57
PPP4R1-227ENST00000583988 WASP42768 502 aa5.25□□□□□ -1.57
PPP4R1-227ENST00000583988 WNT3AP56704 352 aa5.25□□□□□ -1.57
PPP4R1-227ENST00000583988 ABHD18Q0P651 414 aa5.25□□□□□ -1.57
PPP4R1-227ENST00000583988 FHL2Q14192 279 aa5.25□□□□□ -1.57
PPP4R1-227ENST00000583988 PCBP2Q15366 365 aaKnown RBP eCLIP5.25□□□□□ -1.57
PPP4R1-227ENST00000583988 ADRM1Q16186 407 aa5.25□□□□□ -1.57
PPP4R1-227ENST00000583988 NFE2Q16621 373 aaPredicted RBP5.25□□□□□ -1.57
PPP4R1-227ENST00000583988 ABHD15Q6UXT9 468 aa5.25□□□□□ -1.57
PPP4R1-227ENST00000583988 CMTM4Q8IZR5 234 aa5.25□□□□□ -1.57
PPP4R1-227ENST00000583988 CPA6Q8N4T0 437 aa5.25□□□□□ -1.57
PPP4R1-227ENST00000583988 PCGF6Q9BYE7 350 aa5.25□□□□□ -1.57
PPP4R1-227ENST00000583988 ACE2Q9BYF1 805 aaPredicted RBP5.25□□□□□ -1.57
PPP4R1-227ENST00000583988 GREM2Q9H772 168 aa5.25□□□□□ -1.57
PPP4R1-227ENST00000583988 NCDNQ9UBB6 729 aa5.25□□□□□ -1.57
PPP4R1-227ENST00000583988 TCEAL9Q9UHQ7 104 aa5.25□□□□□ -1.57
PPP4R1-227ENST00000583988 SCOCQ9UIL1 159 aa5.25□□□□□ -1.57
PPP4R1-227ENST00000583988 RCAN3Q9UKA8 241 aa5.25□□□□□ -1.57
PPP4R1-227ENST00000583988 PNMA8BQ9ULN7 279 aaPredicted RBP5.25□□□□□ -1.57
PPP4R1-227ENST00000583988 ANKRD6Q9Y2G4 727 aa5.25□□□□□ -1.57
PPP4R1-227ENST00000583988 PCDHGA9Q9Y5G4 932 aaKnown RBP5.25□□□□□ -1.57
PPP4R1-227ENST00000583988 PCDHGA8Q9Y5G5 932 aa5.25□□□□□ -1.57
PPP4R1-227ENST00000583988 PCDHGA7Q9Y5G6 932 aa5.25□□□□□ -1.57
PPP4R1-227ENST00000583988 PCDHGA6Q9Y5G7 932 aa5.25□□□□□ -1.57
PPP4R1-227ENST00000583988 PCDHGA3Q9Y5H0 932 aa5.25□□□□□ -1.57
PPP4R1-227ENST00000583988 PCDHGA2Q9Y5H1 932 aa5.25□□□□□ -1.57
PPP4R1-227ENST00000583988 RPTORQ8N122 1335 aa5.24□□□□□ -1.57
PPP4R1-227ENST00000583988 SUV39H1O43463 412 aa5.24□□□□□ -1.57
PPP4R1-227ENST00000583988 NARSO43776 548 aaKnown RBP5.24□□□□□ -1.57
PPP4R1-227ENST00000583988 TMEM127O75204 238 aa5.24□□□□□ -1.57
PPP4R1-227ENST00000583988 ABLIM3O94929 683 aa5.24□□□□□ -1.57
PPP4R1-227ENST00000583988 MT-CO1P00395 513 aa5.24□□□□□ -1.57
PPP4R1-227ENST00000583988 AKAP5P24588 427 aa5.24□□□□□ -1.57
PPP4R1-227ENST00000583988 ADKP55263 362 aaKnown RBP5.24□□□□□ -1.57
PPP4R1-227ENST00000583988 MALLQ13021 153 aa5.24□□□□□ -1.57
PPP4R1-227ENST00000583988 PIN1Q13526 163 aaPredicted RBP5.24□□□□□ -1.57
PPP4R1-227ENST00000583988 CLUL1Q15846 466 aa5.24□□□□□ -1.57
PPP4R1-227ENST00000583988 MUM1L1Q5H9M0 696 aa5.24□□□□□ -1.57
PPP4R1-227ENST00000583988 MSL3Q8N5Y2 521 aaKnown RBP5.24□□□□□ -1.57
PPP4R1-227ENST00000583988 GLB1L3Q8NCI6 653 aaPredicted RBP5.24□□□□□ -1.57
PPP4R1-227ENST00000583988 GPR156Q8NFN8 814 aa5.24□□□□□ -1.57
PPP4R1-227ENST00000583988 SNX33Q8WV41 574 aa5.24□□□□□ -1.57
PPP4R1-227ENST00000583988 JADE3Q92613 823 aa5.24□□□□□ -1.57
PPP4R1-227ENST00000583988 MPHOSPH9Q99550 1183 aa5.24□□□□□ -1.57
PPP4R1-227ENST00000583988 SMAD5Q99717 465 aaKnown RBP5.24□□□□□ -1.57
PPP4R1-227ENST00000583988 ENKD1Q9H0I2 346 aa5.24□□□□□ -1.57
PPP4R1-227ENST00000583988 IL23AQ9NPF7 189 aa5.24□□□□□ -1.57
PPP4R1-227ENST00000583988 AASDHPPTQ9NRN7 309 aa5.24□□□□□ -1.57
PPP4R1-227ENST00000583988 ZBTB21Q9ULJ3 1066 aa5.24□□□□□ -1.57
PPP4R1-227ENST00000583988 THRAP3Q9Y2W1 955 aaKnown RBP5.24□□□□□ -1.57
PPP4R1-227ENST00000583988 AKAP10O43572 662 aa5.23□□□□□ -1.57
PPP4R1-227ENST00000583988 GASTP01350 101 aa5.23□□□□□ -1.57
PPP4R1-227ENST00000583988 MCM7P33993 719 aa5.23□□□□□ -1.57
PPP4R1-227ENST00000583988 SLC16A1P53985 500 aa5.23□□□□□ -1.57
PPP4R1-227ENST00000583988 TUBA3CQ13748 450 aa5.23□□□□□ -1.57
PPP4R1-227ENST00000583988 RRP1BQ14684 758 aaKnown RBP5.23□□□□□ -1.57
PPP4R1-227ENST00000583988 ELAVL1Q15717 326 aaKnown RBP5.23□□□□□ -1.57
PPP4R1-227ENST00000583988 TUBA3EQ6PEY2 450 aa5.23□□□□□ -1.57
PPP4R1-227ENST00000583988 FAM111BQ6SJ93 734 aa5.23□□□□□ -1.57
PPP4R1-227ENST00000583988 GSPT2Q8IYD1 628 aaKnown RBP5.23□□□□□ -1.57
PPP4R1-227ENST00000583988 CMTR2Q8IYT2 770 aaKnown RBP5.23□□□□□ -1.57
PPP4R1-227ENST00000583988 ANKRD35Q8N283 1001 aa5.23□□□□□ -1.57
PPP4R1-227ENST00000583988 CACTINQ8WUQ7 758 aaKnown RBP5.23□□□□□ -1.57
PPP4R1-227ENST00000583988 JDP2Q8WYK2 163 aa5.23□□□□□ -1.57
PPP4R1-227ENST00000583988 RIN2Q8WYP3 895 aaPredicted RBP5.23□□□□□ -1.57
PPP4R1-227ENST00000583988 HOOK2Q96ED9 719 aa5.23□□□□□ -1.57
PPP4R1-227ENST00000583988 SLC2A13Q96QE2 648 aa5.23□□□□□ -1.57
PPP4R1-227ENST00000583988 TCF25Q9BQ70 676 aa5.23□□□□□ -1.57
PPP4R1-227ENST00000583988 CDH19Q9H159 772 aa5.23□□□□□ -1.57
PPP4R1-227ENST00000583988 AURKAIP1Q9NWT8 199 aaPredicted RBP5.23□□□□□ -1.57
PPP4R1-227ENST00000583988 EID1Q9Y6B2 187 aa5.23□□□□□ -1.57
PPP4R1-227ENST00000583988 NRP1O14786 923 aa5.22□□□□□ -1.57
PPP4R1-227ENST00000583988 XPOTO43592 962 aaKnown RBP5.22□□□□□ -1.57
PPP4R1-227ENST00000583988 OSMP13725 252 aa5.22□□□□□ -1.57
PPP4R1-227ENST00000583988 RAB27AP51159 221 aa5.22□□□□□ -1.57
PPP4R1-227ENST00000583988 CCT2P78371 535 aaKnown RBP5.22□□□□□ -1.57
PPP4R1-227ENST00000583988 Q6ZRM9 215 aa5.22□□□□□ -1.57
PPP4R1-227ENST00000583988 NEU4Q8WWR8 484 aaPredicted RBP5.22□□□□□ -1.57
PPP4R1-227ENST00000583988 ARL8AQ96BM9 186 aa5.22□□□□□ -1.57
PPP4R1-227ENST00000583988 MIEF2Q96C03 454 aa5.22□□□□□ -1.57
PPP4R1-227ENST00000583988 TEKT5Q96M29 485 aa5.22□□□□□ -1.57
PPP4R1-227ENST00000583988 RBM12Q9NTZ6 932 aaKnown RBP5.22□□□□□ -1.57
PPP4R1-227ENST00000583988 CEP72Q9P209 647 aa5.22□□□□□ -1.57
PPP4R1-227ENST00000583988 SAP30BPQ9UHR5 308 aaKnown RBP5.22□□□□□ -1.57
PPP4R1-227ENST00000583988 LUC7L2Q9Y383 392 aaKnown RBP5.22□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms