RNA–Protein interactions for RNA: ENST00000580991.1

IFT20-211, Transcript of intraflagellar transport 20, humanhuman

TSL 4

Gene IFT20, Length 554 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT20-211ENST00000580991 COL4A3BPQ9Y5P4 624 aa16.44■□□□□ 0.22
IFT20-211ENST00000580991 TDRD15B5MCY1 1934 aaKnown RBP16.43■□□□□ 0.22
IFT20-211ENST00000580991 ARL5CA6NH57 179 aa16.43■□□□□ 0.22
IFT20-211ENST00000580991 GOLGA8AA7E2F4 631 aa16.43■□□□□ 0.22
IFT20-211ENST00000580991 GOLGA8BA8MQT2 603 aa16.43■□□□□ 0.22
IFT20-211ENST00000580991 RPS9P46781 194 aaKnown RBP16.43■□□□□ 0.22
IFT20-211ENST00000580991 NECTIN1Q15223 517 aa16.43■□□□□ 0.22
IFT20-211ENST00000580991 PPM1JQ5JR12 505 aa16.43■□□□□ 0.22
IFT20-211ENST00000580991 BICD2Q8TD16 824 aa16.43■□□□□ 0.22
IFT20-211ENST00000580991 NETO1Q8TDF5 533 aa16.43■□□□□ 0.22
IFT20-211ENST00000580991 FGF13Q92913 245 aa16.43■□□□□ 0.22
IFT20-211ENST00000580991 B3GALT6Q96L58 329 aa16.43■□□□□ 0.22
IFT20-211ENST00000580991 MBOAT7Q96N66 472 aa16.43■□□□□ 0.22
IFT20-211ENST00000580991 PRMT8Q9NR22 394 aaPredicted RBP16.43■□□□□ 0.22
IFT20-211ENST00000580991 FAM217BQ9NTX9 383 aaPredicted RBP16.43■□□□□ 0.22
IFT20-211ENST00000580991 RAB23Q9ULC3 237 aa16.43■□□□□ 0.22
IFT20-211ENST00000580991 ANKRD11Q6UB99 2663 aaPredicted RBP16.42■□□□□ 0.22
IFT20-211ENST00000580991 DDX11L8A8MPP1 907 aa16.42■□□□□ 0.22
IFT20-211ENST00000580991 F8W810 466 aa16.42■□□□□ 0.22
IFT20-211ENST00000580991 SLC30A4O14863 429 aa16.42■□□□□ 0.22
IFT20-211ENST00000580991 PSMD10O75832 226 aa16.42■□□□□ 0.22
IFT20-211ENST00000580991 HNRNPA1P09651 372 aaKnown RBP eCLIP16.42■□□□□ 0.22
IFT20-211ENST00000580991 CDC27P30260 824 aa16.42■□□□□ 0.22
IFT20-211ENST00000580991 MLH1P40692 756 aa16.42■□□□□ 0.22
IFT20-211ENST00000580991 USP11P51784 963 aa16.42■□□□□ 0.22
IFT20-211ENST00000580991 RCAN1P53805 252 aa16.42■□□□□ 0.22
IFT20-211ENST00000580991 FUT10Q6P4F1 479 aa16.42■□□□□ 0.22
IFT20-211ENST00000580991 TSSK4Q6SA08 328 aa16.42■□□□□ 0.22
IFT20-211ENST00000580991 SMG8Q8ND04 991 aaKnown RBP16.42■□□□□ 0.22
IFT20-211ENST00000580991 GAD1Q99259 594 aa16.42■□□□□ 0.22
IFT20-211ENST00000580991 PHF20Q9BVI0 1012 aa16.42■□□□□ 0.22
IFT20-211ENST00000580991 GPR62Q9BZJ7 368 aa16.42■□□□□ 0.22
IFT20-211ENST00000580991 MINDY3Q9H8M7 445 aa16.42■□□□□ 0.22
IFT20-211ENST00000580991 IPPQ9Y573 584 aa16.42■□□□□ 0.22
IFT20-211ENST00000580991 LRP3O75074 770 aa16.41■□□□□ 0.22
IFT20-211ENST00000580991 SRGAP2CP0DJJ0 459 aa16.41■□□□□ 0.22
IFT20-211ENST00000580991 RPL17P18621 184 aaKnown RBP16.41■□□□□ 0.22
IFT20-211ENST00000580991 TARSP26639 723 aaKnown RBP16.41■□□□□ 0.22
IFT20-211ENST00000580991 SCNN1GP51170 649 aa16.41■□□□□ 0.22
IFT20-211ENST00000580991 SPEM2Q0P670 501 aa16.41■□□□□ 0.22
IFT20-211ENST00000580991 LIN9Q5TKA1 542 aa16.41■□□□□ 0.22
IFT20-211ENST00000580991 LAIR1Q6GTX8 287 aa16.41■□□□□ 0.22
IFT20-211ENST00000580991 ZNF852Q6ZMS4 543 aa16.41■□□□□ 0.22
IFT20-211ENST00000580991 TPRG1Q6ZUI0 275 aa16.41■□□□□ 0.22
IFT20-211ENST00000580991 ANO5Q75V66 913 aa16.41■□□□□ 0.22
IFT20-211ENST00000580991 EXOC8Q8IYI6 725 aa16.41■□□□□ 0.22
IFT20-211ENST00000580991 SLC7A3Q8WY07 619 aa16.41■□□□□ 0.22
IFT20-211ENST00000580991 GJA10Q969M2 543 aa16.41■□□□□ 0.22
IFT20-211ENST00000580991 FBXW11Q9UKB1 542 aa16.41■□□□□ 0.22
IFT20-211ENST00000580991 ADAM28Q9UKQ2 775 aa16.41■□□□□ 0.22
IFT20-211ENST00000580991 MRPS17Q9Y2R5 130 aaKnown RBP16.41■□□□□ 0.22
IFT20-211ENST00000580991 KLF18A0A0U1RQI7 1052 aa16.4■□□□□ 0.22
IFT20-211ENST00000580991 CCDC196A0A1B0GTZ2 297 aa16.4■□□□□ 0.22
IFT20-211ENST00000580991 EDIL3O43854 480 aa16.4■□□□□ 0.22
IFT20-211ENST00000580991 ADD1P35611 737 aaKnown RBP16.4■□□□□ 0.22
IFT20-211ENST00000580991 NRLP54845 237 aa16.4■□□□□ 0.22
IFT20-211ENST00000580991 NTHL1P78549 312 aa16.4■□□□□ 0.22
IFT20-211ENST00000580991 PPM1LQ5SGD2 360 aa16.4■□□□□ 0.22
IFT20-211ENST00000580991 PRPF31Q8WWY3 499 aaKnown RBP16.4■□□□□ 0.22
IFT20-211ENST00000580991 PSPC1Q8WXF1 523 aaKnown RBP16.4■□□□□ 0.22
IFT20-211ENST00000580991 ZFP42Q96MM3 310 aa16.4■□□□□ 0.22
IFT20-211ENST00000580991 KXD1Q9BQD3 176 aa16.4■□□□□ 0.22
IFT20-211ENST00000580991 RNF39Q9H2S5 420 aa16.4■□□□□ 0.22
IFT20-211ENST00000580991 MIOSQ9NXC5 875 aa16.4■□□□□ 0.22
IFT20-211ENST00000580991 DYNC1LI1Q9Y6G9 523 aaKnown RBP16.4■□□□□ 0.22
IFT20-211ENST00000580991 XYLBO75191 536 aa16.39■□□□□ 0.21
IFT20-211ENST00000580991 ERLIN2O94905 339 aa16.39■□□□□ 0.21
IFT20-211ENST00000580991 C8AP07357 584 aa16.39■□□□□ 0.21
IFT20-211ENST00000580991 HOXA9P31269 272 aa16.39■□□□□ 0.21
IFT20-211ENST00000580991 PSMC5P62195 406 aa16.39■□□□□ 0.21
IFT20-211ENST00000580991 EXOSC10Q01780 885 aaKnown RBP16.39■□□□□ 0.21
IFT20-211ENST00000580991 ADCY1Q08828 1119 aa16.39■□□□□ 0.21
IFT20-211ENST00000580991 LAMTOR4Q0VGL1 99 aa16.39■□□□□ 0.21
IFT20-211ENST00000580991 MTAPQ13126 283 aa16.39■□□□□ 0.21
IFT20-211ENST00000580991 PPP2R5DQ14738 602 aa16.39■□□□□ 0.21
IFT20-211ENST00000580991 PCBP1Q15365 356 aaKnown RBP eCLIP16.39■□□□□ 0.21
IFT20-211ENST00000580991 PLA2G4FQ68DD2 849 aa16.39■□□□□ 0.21
IFT20-211ENST00000580991 B3GNT9Q6UX72 402 aa16.39■□□□□ 0.21
IFT20-211ENST00000580991 DHX32Q7L7V1 743 aaKnown RBP16.39■□□□□ 0.21
IFT20-211ENST00000580991 CELF5Q8N6W0 485 aaKnown RBP16.39■□□□□ 0.21
IFT20-211ENST00000580991 CCDC51Q96ER9 411 aa16.39■□□□□ 0.21
IFT20-211ENST00000580991 TCEANC2Q96MN5 208 aa16.39■□□□□ 0.21
IFT20-211ENST00000580991 EIF2AQ9BY44 585 aaKnown RBP16.39■□□□□ 0.21
IFT20-211ENST00000580991 POLIQ9UNA4 740 aa16.39■□□□□ 0.21
IFT20-211ENST00000580991 GIT1Q9Y2X7 761 aa16.39■□□□□ 0.21
IFT20-211ENST00000580991 RALGAPA1Q6GYQ0 2036 aa16.38■□□□□ 0.21
IFT20-211ENST00000580991 FASNP49327 2511 aaKnown RBP16.38■□□□□ 0.21
IFT20-211ENST00000580991 ZFYVE26Q68DK2 2539 aa16.38■□□□□ 0.21
IFT20-211ENST00000580991 LOC105378220A0A1B0GUY1 285 aaPredicted RBP16.38■□□□□ 0.21
IFT20-211ENST00000580991 RETP07949 1114 aa16.38■□□□□ 0.21
IFT20-211ENST00000580991 AXLP30530 894 aa16.38■□□□□ 0.21
IFT20-211ENST00000580991 NCBP1Q09161 790 aaKnown RBP16.38■□□□□ 0.21
IFT20-211ENST00000580991 FZD5Q13467 585 aa16.38■□□□□ 0.21
IFT20-211ENST00000580991 LPAL2Q16609 132 aa16.38■□□□□ 0.21
IFT20-211ENST00000580991 Q4G0T1 1027 aa16.38■□□□□ 0.21
IFT20-211ENST00000580991 RNF20Q5VTR2 975 aa16.38■□□□□ 0.21
IFT20-211ENST00000580991 NOTUMQ6P988 496 aa16.38■□□□□ 0.21
IFT20-211ENST00000580991 PRSS55Q6UWB4 352 aaPredicted RBP16.38■□□□□ 0.21
IFT20-211ENST00000580991 HACE1Q8IYU2 909 aa16.38■□□□□ 0.21
IFT20-211ENST00000580991 RNF149Q8NC42 400 aa16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms