RNA–Protein interactions for RNA: ENST00000580048.1

LINC00909-202, long intergenic non-protein coding RNA 909, humanhuman

TSL 1 (best) BASIC

Gene LINC00909, Length 3,463 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00909-202ENST00000580048 GATA6Q92908 595 aa10.96□□□□□ -0.66
LINC00909-202ENST00000580048 DNAJC1Q96KC8 554 aaKnown RBP10.96□□□□□ -0.66
LINC00909-202ENST00000580048 SMC6Q96SB8 1091 aa10.96□□□□□ -0.66
LINC00909-202ENST00000580048 NIP7Q9Y221 180 aaKnown RBP eCLIP10.96□□□□□ -0.66
LINC00909-202ENST00000580048 SYNGAP1Q96PV0 1343 aa10.96□□□□□ -0.66
LINC00909-202ENST00000580048 SLC37A4O43826 429 aa10.95□□□□□ -0.66
LINC00909-202ENST00000580048 EXOC3O60645 756 aa10.95□□□□□ -0.66
LINC00909-202ENST00000580048 COILP38432 576 aaPredicted RBP10.95□□□□□ -0.66
LINC00909-202ENST00000580048 PABPC1LQ4VXU2 614 aaKnown RBP10.95□□□□□ -0.66
LINC00909-202ENST00000580048 LIN52Q52LA3 116 aa10.95□□□□□ -0.66
LINC00909-202ENST00000580048 EAPPQ56P03 285 aaPredicted RBP10.95□□□□□ -0.66
LINC00909-202ENST00000580048 GPBP1Q86WP2 473 aa10.95□□□□□ -0.66
LINC00909-202ENST00000580048 ZDHHC14Q8IZN3 488 aa10.95□□□□□ -0.66
LINC00909-202ENST00000580048 WDR60Q8WVS4 1066 aa10.95□□□□□ -0.66
LINC00909-202ENST00000580048 ART4Q93070 314 aa10.95□□□□□ -0.66
LINC00909-202ENST00000580048 LRRC27Q9C0I9 530 aa10.95□□□□□ -0.66
LINC00909-202ENST00000580048 DIS3Q9Y2L1 958 aaKnown RBP10.95□□□□□ -0.66
LINC00909-202ENST00000580048 MEGF6O75095 1541 aa10.95□□□□□ -0.66
LINC00909-202ENST00000580048 SPOPO43791 374 aa10.95□□□□□ -0.66
LINC00909-202ENST00000580048 LRRN2O75325 713 aa10.95□□□□□ -0.66
LINC00909-202ENST00000580048 CA4P22748 312 aa10.95□□□□□ -0.66
LINC00909-202ENST00000580048 CETN2P41208 172 aa10.95□□□□□ -0.66
LINC00909-202ENST00000580048 CPA2P48052 419 aa10.95□□□□□ -0.66
LINC00909-202ENST00000580048 TNNI2P48788 182 aa10.95□□□□□ -0.66
LINC00909-202ENST00000580048 KRT17Q04695 432 aa10.95□□□□□ -0.66
LINC00909-202ENST00000580048 PHLDB3Q6NSJ2 640 aa10.95□□□□□ -0.66
LINC00909-202ENST00000580048 SESTD1Q86VW0 696 aa10.95□□□□□ -0.66
LINC00909-202ENST00000580048 SCFD1Q8WVM8 642 aa10.95□□□□□ -0.66
LINC00909-202ENST00000580048 CCDC77Q9BR77 488 aa10.95□□□□□ -0.66
LINC00909-202ENST00000580048 RIOK1Q9BRS2 568 aaKnown RBP10.95□□□□□ -0.66
LINC00909-202ENST00000580048 ATP8A2Q9NTI2 1148 aa10.95□□□□□ -0.66
LINC00909-202ENST00000580048 MCM9Q9NXL9 1143 aa10.95□□□□□ -0.66
LINC00909-202ENST00000580048 TMCO1Q9UM00 188 aa10.95□□□□□ -0.66
LINC00909-202ENST00000580048 JAG2Q9Y219 1238 aa10.95□□□□□ -0.66
LINC00909-202ENST00000580048 CLIC2O15247 247 aa10.94□□□□□ -0.66
LINC00909-202ENST00000580048 PDE8AO60658 829 aa10.94□□□□□ -0.66
LINC00909-202ENST00000580048 EYA4O95677 639 aa10.94□□□□□ -0.66
LINC00909-202ENST00000580048 TTC4O95801 387 aa10.94□□□□□ -0.66
LINC00909-202ENST00000580048 NPEPPSP55786 919 aa10.94□□□□□ -0.66
LINC00909-202ENST00000580048 SEPT7Q16181 437 aaKnown RBP10.94□□□□□ -0.66
LINC00909-202ENST00000580048 DDB1Q16531 1140 aa10.94□□□□□ -0.66
LINC00909-202ENST00000580048 ISLR2Q6UXK2 745 aa10.94□□□□□ -0.66
LINC00909-202ENST00000580048 CADPS2Q86UW7 1296 aa10.94□□□□□ -0.66
LINC00909-202ENST00000580048 DNAJC10Q8IXB1 793 aa10.94□□□□□ -0.66
LINC00909-202ENST00000580048 REXO1Q8N1G1 1221 aaKnown RBP10.94□□□□□ -0.66
LINC00909-202ENST00000580048 MKNK2Q9HBH9 465 aa10.94□□□□□ -0.66
LINC00909-202ENST00000580048 CLIC5Q9NZA1 410 aa10.94□□□□□ -0.66
LINC00909-202ENST00000580048 COG5Q9UP83 839 aa10.94□□□□□ -0.66
LINC00909-202ENST00000580048 STARD13Q9Y3M8 1113 aa10.94□□□□□ -0.66
LINC00909-202ENST00000580048 MARF1Q9Y4F3 1742 aaKnown RBP10.94□□□□□ -0.66
LINC00909-202ENST00000580048 KLRF2D3W0D1 207 aa10.94□□□□□ -0.66
LINC00909-202ENST00000580048 CCDC22O60826 627 aa10.94□□□□□ -0.66
LINC00909-202ENST00000580048 PYGMP11217 842 aa10.94□□□□□ -0.66
LINC00909-202ENST00000580048 LMNB1P20700 586 aa10.94□□□□□ -0.66
LINC00909-202ENST00000580048 GNA11P29992 359 aa10.94□□□□□ -0.66
LINC00909-202ENST00000580048 AP1B1Q10567 949 aa10.94□□□□□ -0.66
LINC00909-202ENST00000580048 SPARCL1Q14515 664 aa10.94□□□□□ -0.66
LINC00909-202ENST00000580048 ECM1Q16610 540 aa10.94□□□□□ -0.66
LINC00909-202ENST00000580048 SLC35G1Q2M3R5 365 aa10.94□□□□□ -0.66
LINC00909-202ENST00000580048 WDR72Q3MJ13 1102 aa10.94□□□□□ -0.66
LINC00909-202ENST00000580048 FYB2Q5VWT5 728 aa10.94□□□□□ -0.66
LINC00909-202ENST00000580048 SPATA24Q86W54 205 aa10.94□□□□□ -0.66
LINC00909-202ENST00000580048 PALB2Q86YC2 1186 aa10.94□□□□□ -0.66
LINC00909-202ENST00000580048 ST13P4Q8IZP2 240 aaPredicted RBP10.94□□□□□ -0.66
LINC00909-202ENST00000580048 DYNLL2Q96FJ2 89 aa10.94□□□□□ -0.66
LINC00909-202ENST00000580048 MPP4Q96JB8 637 aa10.94□□□□□ -0.66
LINC00909-202ENST00000580048 ASCC2Q9H1I8 757 aaPredicted RBP10.94□□□□□ -0.66
LINC00909-202ENST00000580048 SYNCQ9H7C4 482 aa10.94□□□□□ -0.66
LINC00909-202ENST00000580048 KIAA1024Q9UPX6 916 aa10.94□□□□□ -0.66
LINC00909-202ENST00000580048 CDH16O75309 829 aa10.94□□□□□ -0.66
LINC00909-202ENST00000580048 TMEM253P0C7T8 217 aa10.94□□□□□ -0.66
LINC00909-202ENST00000580048 ADCY8P40145 1251 aa10.94□□□□□ -0.66
LINC00909-202ENST00000580048 Q4G0T1 1027 aa10.94□□□□□ -0.66
LINC00909-202ENST00000580048 ZNF746Q6NUN9 644 aaPredicted RBP10.94□□□□□ -0.66
LINC00909-202ENST00000580048 CFAP61Q8NHU2 1237 aa10.94□□□□□ -0.66
LINC00909-202ENST00000580048 FAM161BQ96MY7 647 aa10.94□□□□□ -0.66
LINC00909-202ENST00000580048 ALG13Q9NP73 1137 aaKnown RBP10.94□□□□□ -0.66
LINC00909-202ENST00000580048 BCS1LQ9Y276 419 aa10.94□□□□□ -0.66
LINC00909-202ENST00000580048 HAUS5O94927 633 aa10.93□□□□□ -0.66
LINC00909-202ENST00000580048 PRKCIP41743 596 aa10.93□□□□□ -0.66
LINC00909-202ENST00000580048 TRIM28Q13263 835 aaKnown RBP10.93□□□□□ -0.66
LINC00909-202ENST00000580048 RNF207Q6ZRF8 634 aa10.93□□□□□ -0.66
LINC00909-202ENST00000580048 CPNE8Q86YQ8 564 aa10.93□□□□□ -0.66
LINC00909-202ENST00000580048 SH3TC2Q8TF17 1288 aa10.93□□□□□ -0.66
LINC00909-202ENST00000580048 ATG4AQ8WYN0 398 aa10.93□□□□□ -0.66
LINC00909-202ENST00000580048 DNAJC19Q96DA6 116 aa10.93□□□□□ -0.66
LINC00909-202ENST00000580048 BRIP1Q9BX63 1249 aa10.93□□□□□ -0.66
LINC00909-202ENST00000580048 UTP3Q9NQZ2 479 aaKnown RBP eCLIP10.93□□□□□ -0.66
LINC00909-202ENST00000580048 KRT82Q9NSB4 513 aa10.93□□□□□ -0.66
LINC00909-202ENST00000580048 ARL8BQ9NVJ2 186 aa10.93□□□□□ -0.66
LINC00909-202ENST00000580048 PCYOX1Q9UHG3 505 aa10.93□□□□□ -0.66
LINC00909-202ENST00000580048 WTIPA6NIX2 430 aaPredicted RBP10.93□□□□□ -0.66
LINC00909-202ENST00000580048 TXNDC9O14530 226 aa10.93□□□□□ -0.66
LINC00909-202ENST00000580048 ATMINO43313 823 aaPredicted RBP10.93□□□□□ -0.66
LINC00909-202ENST00000580048 COMTP21964 271 aa10.93□□□□□ -0.66
LINC00909-202ENST00000580048 CASP4P49662 377 aa10.93□□□□□ -0.66
LINC00909-202ENST00000580048 ITGA8P53708 1063 aa10.93□□□□□ -0.66
LINC00909-202ENST00000580048 PPATQ06203 517 aa10.93□□□□□ -0.66
LINC00909-202ENST00000580048 DRAP1Q14919 205 aaPredicted RBP10.93□□□□□ -0.66
LINC00909-202ENST00000580048 KRT28Q7Z3Y7 464 aa10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms