RNA–Protein interactions for RNA: ENST00000579358.1

MKS1-208, Transcript of Meckel syndrome, type 1, humanhuman

TSL 4

Gene MKS1, Length 567 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-208ENST00000579358 CDT1Q9H211 546 aa11.01□□□□□ -0.65
MKS1-208ENST00000579358 PANK4Q9NVE7 773 aa11.01□□□□□ -0.65
MKS1-208ENST00000579358 TBC1D13Q9NVG8 400 aa11.01□□□□□ -0.65
MKS1-208ENST00000579358 LMCD1Q9NZU5 365 aa11.01□□□□□ -0.65
MKS1-208ENST00000579358 SERTAD1Q9UHV2 236 aa11.01□□□□□ -0.65
MKS1-208ENST00000579358 USP20Q9Y2K6 914 aa11.01□□□□□ -0.65
MKS1-208ENST00000579358 HES2Q9Y543 173 aa11.01□□□□□ -0.65
MKS1-208ENST00000579358 PCDHB12Q9Y5F1 795 aa11.01□□□□□ -0.65
MKS1-208ENST00000579358 GOLGA6L4A6NEF3 574 aa11□□□□□ -0.65
MKS1-208ENST00000579358 GTPBP6O43824 516 aaPredicted RBP11□□□□□ -0.65
MKS1-208ENST00000579358 LPXNO60711 386 aa11□□□□□ -0.65
MKS1-208ENST00000579358 PPP1R37O75864 691 aa11□□□□□ -0.65
MKS1-208ENST00000579358 NMT1P30419 496 aaKnown RBP11□□□□□ -0.65
MKS1-208ENST00000579358 PPM1AP35813 382 aa11□□□□□ -0.65
MKS1-208ENST00000579358 MLH1P40692 756 aa11□□□□□ -0.65
MKS1-208ENST00000579358 GRM5P41594 1212 aa11□□□□□ -0.65
MKS1-208ENST00000579358 LIG4P49917 911 aa11□□□□□ -0.65
MKS1-208ENST00000579358 NDUFA8P51970 172 aa11□□□□□ -0.65
MKS1-208ENST00000579358 ASIC1P78348 528 aa11□□□□□ -0.65
MKS1-208ENST00000579358 MCL1Q07820 350 aa11□□□□□ -0.65
MKS1-208ENST00000579358 COASYQ13057 564 aa11□□□□□ -0.65
MKS1-208ENST00000579358 GPM6BQ13491 265 aa11□□□□□ -0.65
MKS1-208ENST00000579358 NOLC1Q14978 699 aaKnown RBP eCLIP11□□□□□ -0.65
MKS1-208ENST00000579358 LONRF3Q496Y0 759 aa11□□□□□ -0.65
MKS1-208ENST00000579358 HERC4Q5GLZ8 1057 aaPredicted RBP11□□□□□ -0.65
MKS1-208ENST00000579358 SPOUT1Q5T280 376 aaKnown RBP11□□□□□ -0.65
MKS1-208ENST00000579358 UNC13DQ70J99 1090 aa11□□□□□ -0.65
MKS1-208ENST00000579358 FSIP1Q8NA03 581 aa11□□□□□ -0.65
MKS1-208ENST00000579358 COLGALT1Q8NBJ5 622 aa11□□□□□ -0.65
MKS1-208ENST00000579358 BICD1Q96G01 975 aa11□□□□□ -0.65
MKS1-208ENST00000579358 ZNF558Q96NG5 402 aa11□□□□□ -0.65
MKS1-208ENST00000579358 APOL6Q9BWW8 343 aa11□□□□□ -0.65
MKS1-208ENST00000579358 LMAN2LQ9H0V9 348 aa11□□□□□ -0.65
MKS1-208ENST00000579358 RNF39Q9H2S5 420 aa11□□□□□ -0.65
MKS1-208ENST00000579358 GOLPH3LQ9H4A5 285 aa11□□□□□ -0.65
MKS1-208ENST00000579358 MRPL44Q9H9J2 332 aaKnown RBP11□□□□□ -0.65
MKS1-208ENST00000579358 HCSTQ9UBK5 93 aa11□□□□□ -0.65
MKS1-208ENST00000579358 INPP5FQ9Y2H2 1132 aa11□□□□□ -0.65
MKS1-208ENST00000579358 GBF1Q92538 1859 aa11□□□□□ -0.65
MKS1-208ENST00000579358 PVALEFA0A1B0GWK0 134 aa10.99□□□□□ -0.65
MKS1-208ENST00000579358 ARL5CA6NH57 179 aa10.99□□□□□ -0.65
MKS1-208ENST00000579358 RFXAPO00287 272 aa10.99□□□□□ -0.65
MKS1-208ENST00000579358 HNRNPDLO14979 420 aaKnown RBP10.99□□□□□ -0.65
MKS1-208ENST00000579358 CLDN3O15551 220 aa10.99□□□□□ -0.65
MKS1-208ENST00000579358 RECQL4O94761 1208 aa10.99□□□□□ -0.65
MKS1-208ENST00000579358 GCNT3O95395 438 aa10.99□□□□□ -0.65
MKS1-208ENST00000579358 AKAP5P24588 427 aa10.99□□□□□ -0.65
MKS1-208ENST00000579358 UBE3AQ05086 875 aa10.99□□□□□ -0.65
MKS1-208ENST00000579358 RNASELQ05823 741 aaKnown RBP10.99□□□□□ -0.65
MKS1-208ENST00000579358 EHHADHQ08426 723 aa10.99□□□□□ -0.65
MKS1-208ENST00000579358 GRIK3Q13003 919 aa10.99□□□□□ -0.65
MKS1-208ENST00000579358 PTPROQ16827 1216 aa10.99□□□□□ -0.65
MKS1-208ENST00000579358 L1TD1Q5T7N2 865 aaKnown RBP10.99□□□□□ -0.65
MKS1-208ENST00000579358 KCNT2Q6UVM3 1135 aa10.99□□□□□ -0.65
MKS1-208ENST00000579358 STXBP4Q6ZWJ1 553 aa10.99□□□□□ -0.65
MKS1-208ENST00000579358 KLHL23Q8NBE8 558 aa10.99□□□□□ -0.65
MKS1-208ENST00000579358 TMEM87AQ8NBN3 555 aa10.99□□□□□ -0.65
MKS1-208ENST00000579358 PAGE5Q96GU1 130 aa10.99□□□□□ -0.65
MKS1-208ENST00000579358 CCDC34Q96HJ3 373 aa10.99□□□□□ -0.65
MKS1-208ENST00000579358 IPO9Q96P70 1041 aaKnown RBP10.99□□□□□ -0.65
MKS1-208ENST00000579358 RPS6KC1Q96S38 1066 aa10.99□□□□□ -0.65
MKS1-208ENST00000579358 GAD1Q99259 594 aa10.99□□□□□ -0.65
MKS1-208ENST00000579358 TCHPQ9BT92 498 aa10.99□□□□□ -0.65
MKS1-208ENST00000579358 CCDC94Q9BW85 323 aaPredicted RBP10.99□□□□□ -0.65
MKS1-208ENST00000579358 NRDE2Q9H7Z3 1164 aa10.99□□□□□ -0.65
MKS1-208ENST00000579358 TSHZ2Q9NRE2 1034 aa10.99□□□□□ -0.65
MKS1-208ENST00000579358 TOPORSQ9NS56 1045 aaPredicted RBP10.99□□□□□ -0.65
MKS1-208ENST00000579358 SNTG2Q9NY99 539 aa10.99□□□□□ -0.65
MKS1-208ENST00000579358 ANKFY1Q9P2R3 1169 aa10.99□□□□□ -0.65
MKS1-208ENST00000579358 PARP2Q9UGN5 583 aa10.99□□□□□ -0.65
MKS1-208ENST00000579358 EXOC7Q9UPT5 735 aa10.99□□□□□ -0.65
MKS1-208ENST00000579358 PCDHB13Q9Y5F0 798 aa10.99□□□□□ -0.65
MKS1-208ENST00000579358 MTCH2Q9Y6C9 303 aa10.99□□□□□ -0.65
MKS1-208ENST00000579358 LAMA2P24043 3122 aaKnown RBP10.98□□□□□ -0.65
MKS1-208ENST00000579358 EIF3DO15371 548 aaKnown RBP eCLIP10.98□□□□□ -0.65
MKS1-208ENST00000579358 ZC3H11AO75152 810 aaKnown RBP eCLIP10.98□□□□□ -0.65
MKS1-208ENST00000579358 ZNF202O95125 648 aa10.98□□□□□ -0.65
MKS1-208ENST00000579358 POMCP01189 267 aa10.98□□□□□ -0.65
MKS1-208ENST00000579358 ITGB1P05556 798 aa10.98□□□□□ -0.65
MKS1-208ENST00000579358 IGFBP4P22692 258 aa10.98□□□□□ -0.65
MKS1-208ENST00000579358 AFMP43652 599 aa10.98□□□□□ -0.65
MKS1-208ENST00000579358 ALDH7A1P49419 539 aaKnown RBP10.98□□□□□ -0.65
MKS1-208ENST00000579358 SCNN1GP51170 649 aa10.98□□□□□ -0.65
MKS1-208ENST00000579358 AFF1P51825 1210 aaKnown RBP10.98□□□□□ -0.65
MKS1-208ENST00000579358 YARSP54577 528 aaKnown RBP10.98□□□□□ -0.65
MKS1-208ENST00000579358 BCAR1P56945 870 aa10.98□□□□□ -0.65
MKS1-208ENST00000579358 PLCB3Q01970 1234 aa10.98□□□□□ -0.65
MKS1-208ENST00000579358 DSC1Q08554 894 aa10.98□□□□□ -0.65
MKS1-208ENST00000579358 CUL4BQ13620 913 aa10.98□□□□□ -0.65
MKS1-208ENST00000579358 KYAT1Q16773 422 aa10.98□□□□□ -0.65
MKS1-208ENST00000579358 ZC2HC1CQ53FD0 456 aaPredicted RBP10.98□□□□□ -0.65
MKS1-208ENST00000579358 FAM26FQ5R3K3 315 aa10.98□□□□□ -0.65
MKS1-208ENST00000579358 SLFN12LQ6IEE8 588 aa10.98□□□□□ -0.65
MKS1-208ENST00000579358 KRBA2Q6ZNG9 492 aa10.98□□□□□ -0.65
MKS1-208ENST00000579358 THNSL1Q8IYQ7 743 aa10.98□□□□□ -0.65
MKS1-208ENST00000579358 SLC39A11Q8N1S5 342 aa10.98□□□□□ -0.65
MKS1-208ENST00000579358 CEP120Q8N960 986 aa10.98□□□□□ -0.65
MKS1-208ENST00000579358 GSTCDQ8NEC7 633 aa10.98□□□□□ -0.65
MKS1-208ENST00000579358 MRPL38Q96DV4 380 aaKnown RBP10.98□□□□□ -0.65
MKS1-208ENST00000579358 ZFP42Q96MM3 310 aa10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms