RNA–Protein interactions for RNA: ENST00000573989.1

TRAPPC1-206, Transcript of trafficking protein particle complex 1, humanhuman

TSL 2

Gene TRAPPC1, Length 436 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1-206ENST00000573989 PCDHB12Q9Y5F1 795 aa13.99□□□□□ -0.17
TRAPPC1-206ENST00000573989 TTLL13PA6NNM8 815 aa13.98□□□□□ -0.17
TRAPPC1-206ENST00000573989 KINO60870 393 aaKnown RBP13.98□□□□□ -0.17
TRAPPC1-206ENST00000573989 PIGRP01833 764 aa13.98□□□□□ -0.17
TRAPPC1-206ENST00000573989 EDN1P05305 212 aa13.98□□□□□ -0.17
TRAPPC1-206ENST00000573989 MCF2P10911 925 aa13.98□□□□□ -0.17
TRAPPC1-206ENST00000573989 LAG3P18627 525 aa13.98□□□□□ -0.17
TRAPPC1-206ENST00000573989 GATMP50440 423 aa13.98□□□□□ -0.17
TRAPPC1-206ENST00000573989 YARSP54577 528 aaKnown RBP13.98□□□□□ -0.17
TRAPPC1-206ENST00000573989 UBE2HP62256 183 aa13.98□□□□□ -0.17
TRAPPC1-206ENST00000573989 CUL4BQ13620 913 aa13.98□□□□□ -0.17
TRAPPC1-206ENST00000573989 NOLC1Q14978 699 aaKnown RBP eCLIP13.98□□□□□ -0.17
TRAPPC1-206ENST00000573989 NOMO2Q5JPE7 1267 aa13.98□□□□□ -0.17
TRAPPC1-206ENST00000573989 CLLU1OSQ5K130 101 aa13.98□□□□□ -0.17
TRAPPC1-206ENST00000573989 FAM26FQ5R3K3 315 aa13.98□□□□□ -0.17
TRAPPC1-206ENST00000573989 SLFN12LQ6IEE8 588 aa13.98□□□□□ -0.17
TRAPPC1-206ENST00000573989 AGMOQ6ZNB7 445 aa13.98□□□□□ -0.17
TRAPPC1-206ENST00000573989 SYCP3Q8IZU3 236 aa13.98□□□□□ -0.17
TRAPPC1-206ENST00000573989 FBXO22Q8NEZ5 403 aa13.98□□□□□ -0.17
TRAPPC1-206ENST00000573989 ARNTL2Q8WYA1 636 aa13.98□□□□□ -0.17
TRAPPC1-206ENST00000573989 TIGD1Q96MW7 591 aa13.98□□□□□ -0.17
TRAPPC1-206ENST00000573989 FAM161BQ96MY7 647 aa13.98□□□□□ -0.17
TRAPPC1-206ENST00000573989 FAM193BQ96PV7 902 aaPredicted RBP13.98□□□□□ -0.17
TRAPPC1-206ENST00000573989 RPS6KC1Q96S38 1066 aa13.98□□□□□ -0.17
TRAPPC1-206ENST00000573989 FIZ1Q96SL8 496 aa13.98□□□□□ -0.17
TRAPPC1-206ENST00000573989 CCDC94Q9BW85 323 aaPredicted RBP13.98□□□□□ -0.17
TRAPPC1-206ENST00000573989 NXF3Q9H4D5 531 aaKnown RBP13.98□□□□□ -0.17
TRAPPC1-206ENST00000573989 TMEM206Q9H813 350 aa13.98□□□□□ -0.17
TRAPPC1-206ENST00000573989 TOPORSQ9NS56 1045 aaPredicted RBP13.98□□□□□ -0.17
TRAPPC1-206ENST00000573989 ANKFY1Q9P2R3 1169 aa13.98□□□□□ -0.17
TRAPPC1-206ENST00000573989 MTUS1Q9ULD2 1270 aa13.98□□□□□ -0.17
TRAPPC1-206ENST00000573989 INPP5FQ9Y2H2 1132 aa13.98□□□□□ -0.17
TRAPPC1-206ENST00000573989 MRPL42Q9Y6G3 142 aaKnown RBP13.98□□□□□ -0.17
TRAPPC1-206ENST00000573989 KIAA1671Q9BY89 1806 aa13.98□□□□□ -0.17
TRAPPC1-206ENST00000573989 TRIP11Q15643 1979 aa13.97□□□□□ -0.17
TRAPPC1-206ENST00000573989 GOLGA6L22H0YM25 854 aa13.97□□□□□ -0.17
TRAPPC1-206ENST00000573989 EIF3DO15371 548 aaKnown RBP eCLIP13.97□□□□□ -0.17
TRAPPC1-206ENST00000573989 OFD1O75665 1012 aa13.97□□□□□ -0.17
TRAPPC1-206ENST00000573989 PROZP22891 400 aa13.97□□□□□ -0.17
TRAPPC1-206ENST00000573989 CTNNB1P35222 781 aa13.97□□□□□ -0.17
TRAPPC1-206ENST00000573989 BMPR1AP36894 532 aa13.97□□□□□ -0.17
TRAPPC1-206ENST00000573989 PSMD2Q13200 908 aa13.97□□□□□ -0.17
TRAPPC1-206ENST00000573989 POSTNQ15063 836 aa13.97□□□□□ -0.17
TRAPPC1-206ENST00000573989 EPC2Q52LR7 807 aa13.97□□□□□ -0.17
TRAPPC1-206ENST00000573989 ZC2HC1CQ53FD0 456 aaPredicted RBP13.97□□□□□ -0.17
TRAPPC1-206ENST00000573989 L1TD1Q5T7N2 865 aaKnown RBP13.97□□□□□ -0.17
TRAPPC1-206ENST00000573989 EEF1DP3Q658K8 133 aa13.97□□□□□ -0.17
TRAPPC1-206ENST00000573989 CLEC17AQ6ZS10 378 aa13.97□□□□□ -0.17
TRAPPC1-206ENST00000573989 Q7L0L9 218 aa13.97□□□□□ -0.17
TRAPPC1-206ENST00000573989 ZBTB33Q86T24 672 aa13.97□□□□□ -0.17
TRAPPC1-206ENST00000573989 GRAMD1CQ8IYS0 662 aa13.97□□□□□ -0.17
TRAPPC1-206ENST00000573989 FMR1NBQ8N0W7 255 aaPredicted RBP13.97□□□□□ -0.17
TRAPPC1-206ENST00000573989 C11orf84Q9BUA3 381 aaPredicted RBP13.97□□□□□ -0.17
TRAPPC1-206ENST00000573989 CERS4Q9HA82 394 aa13.97□□□□□ -0.17
TRAPPC1-206ENST00000573989 PTPRHQ9HD43 1115 aa13.97□□□□□ -0.17
TRAPPC1-206ENST00000573989 RNF19AQ9NV58 838 aa13.97□□□□□ -0.17
TRAPPC1-206ENST00000573989 TYW1Q9NV66 732 aaKnown RBP13.97□□□□□ -0.17
TRAPPC1-206ENST00000573989 SNTG2Q9NY99 539 aa13.97□□□□□ -0.17
TRAPPC1-206ENST00000573989 USP20Q9Y2K6 914 aa13.97□□□□□ -0.17
TRAPPC1-206ENST00000573989 HES2Q9Y543 173 aa13.97□□□□□ -0.17
TRAPPC1-206ENST00000573989 UBE4BO95155 1302 aa13.96□□□□□ -0.17
TRAPPC1-206ENST00000573989 ARL5CA6NH57 179 aa13.96□□□□□ -0.17
TRAPPC1-206ENST00000573989 MEIS3P2A8K0S8 358 aa13.96□□□□□ -0.17
TRAPPC1-206ENST00000573989 C5orf67F2Z3F1 127 aa13.96□□□□□ -0.17
TRAPPC1-206ENST00000573989 NR1I2O75469 434 aa13.96□□□□□ -0.17
TRAPPC1-206ENST00000573989 PPP1R37O75864 691 aa13.96□□□□□ -0.17
TRAPPC1-206ENST00000573989 KIF20AO95235 890 aa13.96□□□□□ -0.17
TRAPPC1-206ENST00000573989 HARSP12081 509 aaKnown RBP13.96□□□□□ -0.17
TRAPPC1-206ENST00000573989 AKAP5P24588 427 aa13.96□□□□□ -0.17
TRAPPC1-206ENST00000573989 PPM1AP35813 382 aa13.96□□□□□ -0.17
TRAPPC1-206ENST00000573989 MLH1P40692 756 aa13.96□□□□□ -0.17
TRAPPC1-206ENST00000573989 GRM5P41594 1212 aa13.96□□□□□ -0.17
TRAPPC1-206ENST00000573989 ALDH7A1P49419 539 aaKnown RBP13.96□□□□□ -0.17
TRAPPC1-206ENST00000573989 MCL1Q07820 350 aa13.96□□□□□ -0.17
TRAPPC1-206ENST00000573989 SNW1Q13573 536 aaKnown RBP13.96□□□□□ -0.17
TRAPPC1-206ENST00000573989 GRIN2CQ14957 1233 aa13.96□□□□□ -0.17
TRAPPC1-206ENST00000573989 ENGASEQ8NFI3 743 aa13.96□□□□□ -0.17
TRAPPC1-206ENST00000573989 P2RX5Q93086 422 aa13.96□□□□□ -0.17
TRAPPC1-206ENST00000573989 ACAP3Q96P50 834 aa13.96□□□□□ -0.17
TRAPPC1-206ENST00000573989 GAD1Q99259 594 aa13.96□□□□□ -0.17
TRAPPC1-206ENST00000573989 C17orf80Q9BSJ5 609 aa13.96□□□□□ -0.17
TRAPPC1-206ENST00000573989 STRA6Q9BX79 667 aa13.96□□□□□ -0.17
TRAPPC1-206ENST00000573989 CDT1Q9H211 546 aa13.96□□□□□ -0.17
TRAPPC1-206ENST00000573989 MTMR10Q9NXD2 777 aa13.96□□□□□ -0.17
TRAPPC1-206ENST00000573989 GDAQ9Y2T3 454 aa13.96□□□□□ -0.17
TRAPPC1-206ENST00000573989 INPPL1O15357 1258 aa13.95□□□□□ -0.18
TRAPPC1-206ENST00000573989 PRPF40AO75400 957 aaKnown RBP13.95□□□□□ -0.18
TRAPPC1-206ENST00000573989 RECQL4O94761 1208 aa13.95□□□□□ -0.18
TRAPPC1-206ENST00000573989 ARHGEF15O94989 841 aa13.95□□□□□ -0.18
TRAPPC1-206ENST00000573989 SMC2O95347 1197 aa13.95□□□□□ -0.18
TRAPPC1-206ENST00000573989 RPN1P04843 607 aaKnown RBP13.95□□□□□ -0.18
TRAPPC1-206ENST00000573989 MYBP10242 640 aa13.95□□□□□ -0.18
TRAPPC1-206ENST00000573989 CASP1P29466 404 aa13.95□□□□□ -0.18
TRAPPC1-206ENST00000573989 GPM6BQ13491 265 aa13.95□□□□□ -0.18
TRAPPC1-206ENST00000573989 PTPROQ16827 1216 aa13.95□□□□□ -0.18
TRAPPC1-206ENST00000573989 THNSL1Q8IYQ7 743 aa13.95□□□□□ -0.18
TRAPPC1-206ENST00000573989 ZBTB45Q96K62 511 aaPredicted RBP13.95□□□□□ -0.18
TRAPPC1-206ENST00000573989 ZNF558Q96NG5 402 aa13.95□□□□□ -0.18
TRAPPC1-206ENST00000573989 MSTO1Q9BUK6 570 aa13.95□□□□□ -0.18
TRAPPC1-206ENST00000573989 RNF39Q9H2S5 420 aa13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms