RNA–Protein interactions for RNA: ENST00000569454.1

CDH13-213, Transcript of cadherin 13, humanhuman

TSL 3

Gene CDH13, Length 877 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-213ENST00000569454 WHAMMQ8TF30 809 aa6.19□□□□□ -1.42
CDH13-213ENST00000569454 AENQ8WTP8 325 aaKnown RBP6.19□□□□□ -1.42
CDH13-213ENST00000569454 U2AF1L4Q8WU68 220 aaKnown RBP6.19□□□□□ -1.42
CDH13-213ENST00000569454 GTF3C2Q8WUA4 911 aaPredicted RBP6.19□□□□□ -1.42
CDH13-213ENST00000569454 SLC7A3Q8WY07 619 aa6.19□□□□□ -1.42
CDH13-213ENST00000569454 TRIM11Q96F44 468 aa6.19□□□□□ -1.42
CDH13-213ENST00000569454 NT5C1BQ96P26 610 aa6.19□□□□□ -1.42
CDH13-213ENST00000569454 RUFY1Q96T51 708 aa6.19□□□□□ -1.42
CDH13-213ENST00000569454 JPH2Q9BR39 696 aaPredicted RBP6.19□□□□□ -1.42
CDH13-213ENST00000569454 BUD13Q9BRD0 619 aaKnown RBP eCLIP6.19□□□□□ -1.42
CDH13-213ENST00000569454 PLVAPQ9BX97 442 aa6.19□□□□□ -1.42
CDH13-213ENST00000569454 CARD9Q9H257 536 aa6.19□□□□□ -1.42
CDH13-213ENST00000569454 EPC1Q9H2F5 836 aa6.19□□□□□ -1.42
CDH13-213ENST00000569454 SLITRK6Q9H5Y7 841 aa6.19□□□□□ -1.42
CDH13-213ENST00000569454 A1CFQ9NQ94 594 aaKnown RBP6.19□□□□□ -1.42
CDH13-213ENST00000569454 CYP26B1Q9NR63 512 aa6.19□□□□□ -1.42
CDH13-213ENST00000569454 ADARB2Q9NS39 739 aaKnown RBP6.19□□□□□ -1.42
CDH13-213ENST00000569454 ARHGAP28Q9P2N2 729 aa6.19□□□□□ -1.42
CDH13-213ENST00000569454 GABBR1Q9UBS5 961 aa6.19□□□□□ -1.42
CDH13-213ENST00000569454 AMFRQ9UKV5 643 aa6.19□□□□□ -1.42
CDH13-213ENST00000569454 TTC7AQ9ULT0 858 aaPredicted RBP6.19□□□□□ -1.42
CDH13-213ENST00000569454 TFR2Q9UP52 801 aa6.19□□□□□ -1.42
CDH13-213ENST00000569454 RLFQ13129 1914 aa6.19□□□□□ -1.42
CDH13-213ENST00000569454 DICER1Q9UPY3 1922 aaKnown RBP6.19□□□□□ -1.42
CDH13-213ENST00000569454 MUC3AQ02505 3323 aa6.18□□□□□ -1.42
CDH13-213ENST00000569454 GOLGA6BA6NDN3 693 aa6.18□□□□□ -1.42
CDH13-213ENST00000569454 CCDC169A6NNP5 214 aa6.18□□□□□ -1.42
CDH13-213ENST00000569454 CXCL11O14625 94 aa6.18□□□□□ -1.42
CDH13-213ENST00000569454 KCNK3O14649 394 aa6.18□□□□□ -1.42
CDH13-213ENST00000569454 ZBTB39O15060 712 aa6.18□□□□□ -1.42
CDH13-213ENST00000569454 ZNF185O15231 689 aa6.18□□□□□ -1.42
CDH13-213ENST00000569454 SLC16A4O15374 487 aa6.18□□□□□ -1.42
CDH13-213ENST00000569454 OPA1O60313 960 aa6.18□□□□□ -1.42
CDH13-213ENST00000569454 ATP9AO75110 1047 aa6.18□□□□□ -1.42
CDH13-213ENST00000569454 RTN2O75298 545 aa6.18□□□□□ -1.42
CDH13-213ENST00000569454 ATG7O95352 703 aa6.18□□□□□ -1.42
CDH13-213ENST00000569454 GGPS1O95749 300 aa6.18□□□□□ -1.42
CDH13-213ENST00000569454 FTCDO95954 541 aa6.18□□□□□ -1.42
CDH13-213ENST00000569454 OATP04181 439 aa6.18□□□□□ -1.42
CDH13-213ENST00000569454 EDNRBP24530 442 aa6.18□□□□□ -1.42
CDH13-213ENST00000569454 CNGA1P29973 690 aa6.18□□□□□ -1.42
CDH13-213ENST00000569454 IREB2P48200 963 aaKnown RBP6.18□□□□□ -1.42
CDH13-213ENST00000569454 SLC26A2P50443 739 aa6.18□□□□□ -1.42
CDH13-213ENST00000569454 PDE6CP51160 858 aa6.18□□□□□ -1.42
CDH13-213ENST00000569454 AP3M2P53677 418 aa6.18□□□□□ -1.42
CDH13-213ENST00000569454 POLGP54098 1239 aaPredicted RBP6.18□□□□□ -1.42
CDH13-213ENST00000569454 GALCP54803 685 aa6.18□□□□□ -1.42
CDH13-213ENST00000569454 BPIFB4P59827 614 aa6.18□□□□□ -1.42
CDH13-213ENST00000569454 GCNT1Q02742 428 aa6.18□□□□□ -1.42
CDH13-213ENST00000569454 CYP24A1Q07973 514 aa6.18□□□□□ -1.42
CDH13-213ENST00000569454 EMC2Q15006 297 aa6.18□□□□□ -1.42
CDH13-213ENST00000569454 ENOX2Q16206 610 aaKnown RBP6.18□□□□□ -1.42
CDH13-213ENST00000569454 UGCGQ16739 394 aa6.18□□□□□ -1.42
CDH13-213ENST00000569454 ALS2CLQ60I27 953 aa6.18□□□□□ -1.42
CDH13-213ENST00000569454 ABHD15Q6UXT9 468 aa6.18□□□□□ -1.42
CDH13-213ENST00000569454 ZNF771Q7L3S4 317 aaPredicted RBP6.18□□□□□ -1.42
CDH13-213ENST00000569454 MAATS1Q7Z4T9 603 aa6.18□□□□□ -1.42
CDH13-213ENST00000569454 DAAM2Q86T65 1068 aa6.18□□□□□ -1.42
CDH13-213ENST00000569454 ZNF677Q86XU0 584 aa6.18□□□□□ -1.42
CDH13-213ENST00000569454 GLYCTKQ8IVS8 523 aa6.18□□□□□ -1.42
CDH13-213ENST00000569454 SULF1Q8IWU6 871 aa6.18□□□□□ -1.42
CDH13-213ENST00000569454 FAM71AQ8IYT1 594 aa6.18□□□□□ -1.42
CDH13-213ENST00000569454 ANKRD35Q8N283 1001 aa6.18□□□□□ -1.42
CDH13-213ENST00000569454 RASGEF1CQ8N431 466 aa6.18□□□□□ -1.42
CDH13-213ENST00000569454 MREGQ8N565 214 aa6.18□□□□□ -1.42
CDH13-213ENST00000569454 UBL4BQ8N7F7 174 aa6.18□□□□□ -1.42
CDH13-213ENST00000569454 CCDC26Q8TAB7 109 aa6.18□□□□□ -1.42
CDH13-213ENST00000569454 LMO3Q8TAP4 145 aa6.18□□□□□ -1.42
CDH13-213ENST00000569454 TRPM4Q8TD43 1214 aa6.18□□□□□ -1.42
CDH13-213ENST00000569454 PARD3BQ8TEW8 1205 aa6.18□□□□□ -1.42
CDH13-213ENST00000569454 POMGNT1Q8WZA1 660 aa6.18□□□□□ -1.42
CDH13-213ENST00000569454 SHC3Q92529 594 aa6.18□□□□□ -1.42
CDH13-213ENST00000569454 ZKSCAN4Q969J2 545 aaPredicted RBP6.18□□□□□ -1.42
CDH13-213ENST00000569454 CCDC102AQ96A19 550 aa6.18□□□□□ -1.42
CDH13-213ENST00000569454 DCPSQ96C86 337 aaKnown RBP6.18□□□□□ -1.42
CDH13-213ENST00000569454 HES6Q96HZ4 224 aa6.18□□□□□ -1.42
CDH13-213ENST00000569454 MFSD14AQ96MC6 490 aa6.18□□□□□ -1.42
CDH13-213ENST00000569454 RUNDC3BQ96NL0 473 aa6.18□□□□□ -1.42
CDH13-213ENST00000569454 AGPAT1Q99943 283 aa6.18□□□□□ -1.42
CDH13-213ENST00000569454 CBWD1Q9BRT8 395 aa6.18□□□□□ -1.42
CDH13-213ENST00000569454 PACSIN1Q9BY11 444 aa6.18□□□□□ -1.42
CDH13-213ENST00000569454 FAM129AQ9BZQ8 928 aa6.18□□□□□ -1.42
CDH13-213ENST00000569454 ISCUQ9H1K1 167 aa6.18□□□□□ -1.42
CDH13-213ENST00000569454 PDE11AQ9HCR9 933 aa6.18□□□□□ -1.42
CDH13-213ENST00000569454 C1orf112Q9NSG2 853 aa6.18□□□□□ -1.42
CDH13-213ENST00000569454 RBM12Q9NTZ6 932 aaKnown RBP6.18□□□□□ -1.42
CDH13-213ENST00000569454 SLTMQ9NWH9 1034 aaKnown RBP eCLIP6.18□□□□□ -1.42
CDH13-213ENST00000569454 UVRAGQ9P2Y5 699 aa6.18□□□□□ -1.42
CDH13-213ENST00000569454 SEPT9Q9UHD8 586 aaPredicted RBP6.18□□□□□ -1.42
CDH13-213ENST00000569454 LCMT1Q9UIC8 334 aa6.18□□□□□ -1.42
CDH13-213ENST00000569454 SALL4Q9UJQ4 1053 aa6.18□□□□□ -1.42
CDH13-213ENST00000569454 TMEM59LQ9UK28 342 aa6.18□□□□□ -1.42
CDH13-213ENST00000569454 STYXL1Q9Y6J8 313 aa6.18□□□□□ -1.42
CDH13-213ENST00000569454 PAPPA2Q9BXP8 1791 aa6.18□□□□□ -1.42
CDH13-213ENST00000569454 SMCHD1A6NHR9 2005 aa6.18□□□□□ -1.42
CDH13-213ENST00000569454 ARID2Q68CP9 1835 aa6.18□□□□□ -1.42
CDH13-213ENST00000569454 SETXQ7Z333 2677 aaKnown RBP6.17□□□□□ -1.42
CDH13-213ENST00000569454 IGKV6D-21A0A0A0MT36 114 aa6.17□□□□□ -1.42
CDH13-213ENST00000569454 UNCXA6NJT0 531 aa6.17□□□□□ -1.42
CDH13-213ENST00000569454 ZNF233A6NK53 670 aa6.17□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms