RNA–Protein interactions for RNA: ENST00000569080.1

CDH3-209, Transcript of cadherin 3, humanhuman

TSL 5

Gene CDH3, Length 291 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-209ENST00000569080 C1orf186Q6ZWK4 172 aa8.64□□□□□ -1.03
CDH3-209ENST00000569080 DEPTORQ8TB45 409 aa8.64□□□□□ -1.03
CDH3-209ENST00000569080 SLC22A17Q8WUG5 538 aa8.64□□□□□ -1.03
CDH3-209ENST00000569080 KIFAP3Q92845 792 aa8.64□□□□□ -1.03
CDH3-209ENST00000569080 POP1Q99575 1024 aaKnown RBP8.64□□□□□ -1.03
CDH3-209ENST00000569080 HERC2P3Q9BVR0 1158 aa8.64□□□□□ -1.03
CDH3-209ENST00000569080 APOL6Q9BWW8 343 aa8.64□□□□□ -1.03
CDH3-209ENST00000569080 C1QTNF1Q9BXJ1 281 aa8.64□□□□□ -1.03
CDH3-209ENST00000569080 TRIM6Q9C030 488 aaPredicted RBP8.64□□□□□ -1.03
CDH3-209ENST00000569080 CACNG4Q9UBN1 327 aa8.64□□□□□ -1.03
CDH3-209ENST00000569080 PRG3Q9Y2Y8 225 aaPredicted RBP8.64□□□□□ -1.03
CDH3-209ENST00000569080 ZSCAN21Q9Y5A6 473 aaPredicted RBP8.64□□□□□ -1.03
CDH3-209ENST00000569080 STK24Q9Y6E0 443 aa8.64□□□□□ -1.03
CDH3-209ENST00000569080 MYH11P35749 1972 aa8.64□□□□□ -1.03
CDH3-209ENST00000569080 PDCD11Q14690 1871 aaKnown RBP8.64□□□□□ -1.03
CDH3-209ENST00000569080 TECTAO75443 2155 aa8.63□□□□□ -1.03
CDH3-209ENST00000569080 TRIP11Q15643 1979 aa8.63□□□□□ -1.03
CDH3-209ENST00000569080 ZNF318Q5VUA4 2279 aa8.63□□□□□ -1.03
CDH3-209ENST00000569080 VWA3AA6NCI4 1184 aa8.63□□□□□ -1.03
CDH3-209ENST00000569080 FAM86C2PA6NEL3 165 aa8.63□□□□□ -1.03
CDH3-209ENST00000569080 H3BQV1 296 aa8.63□□□□□ -1.03
CDH3-209ENST00000569080 N4BP3O15049 544 aa8.63□□□□□ -1.03
CDH3-209ENST00000569080 DCXO43602 365 aa8.63□□□□□ -1.03
CDH3-209ENST00000569080 GPR37L1O60883 481 aa8.63□□□□□ -1.03
CDH3-209ENST00000569080 HIP1RO75146 1068 aa8.63□□□□□ -1.03
CDH3-209ENST00000569080 RECQL4O94761 1208 aa8.63□□□□□ -1.03
CDH3-209ENST00000569080 SOD2P04179 222 aa8.63□□□□□ -1.03
CDH3-209ENST00000569080 EPCAMP16422 314 aa8.63□□□□□ -1.03
CDH3-209ENST00000569080 HOXB8P17481 243 aaPredicted RBP8.63□□□□□ -1.03
CDH3-209ENST00000569080 GUCY2CP25092 1073 aa8.63□□□□□ -1.03
CDH3-209ENST00000569080 NPTX2P47972 431 aa8.63□□□□□ -1.03
CDH3-209ENST00000569080 EFNA5P52803 228 aa8.63□□□□□ -1.03
CDH3-209ENST00000569080 SLC12A3P55017 1021 aa8.63□□□□□ -1.03
CDH3-209ENST00000569080 GRIN1Q05586 938 aa8.63□□□□□ -1.03
CDH3-209ENST00000569080 NCBP1Q09161 790 aaKnown RBP8.63□□□□□ -1.03
CDH3-209ENST00000569080 RESTQ13127 1097 aa8.63□□□□□ -1.03
CDH3-209ENST00000569080 PRPF4BQ13523 1007 aaKnown RBP8.63□□□□□ -1.03
CDH3-209ENST00000569080 GIT2Q14161 759 aa8.63□□□□□ -1.03
CDH3-209ENST00000569080 PPP2R5AQ15172 486 aa8.63□□□□□ -1.03
CDH3-209ENST00000569080 LARP1BQ659C4 914 aaKnown RBP8.63□□□□□ -1.03
CDH3-209ENST00000569080 TAS1R1Q7RTX1 841 aa8.63□□□□□ -1.03
CDH3-209ENST00000569080 BRAPQ7Z569 592 aa8.63□□□□□ -1.03
CDH3-209ENST00000569080 HACE1Q8IYU2 909 aa8.63□□□□□ -1.03
CDH3-209ENST00000569080 CASP10Q92851 521 aa8.63□□□□□ -1.03
CDH3-209ENST00000569080 PAAF1Q9BRP4 392 aa8.63□□□□□ -1.03
CDH3-209ENST00000569080 LRFN3Q9BTN0 628 aa8.63□□□□□ -1.03
CDH3-209ENST00000569080 PHF7Q9BWX1 381 aaPredicted RBP8.63□□□□□ -1.03
CDH3-209ENST00000569080 PTPRHQ9HD43 1115 aa8.63□□□□□ -1.03
CDH3-209ENST00000569080 KLK14Q9P0G3 267 aa8.63□□□□□ -1.03
CDH3-209ENST00000569080 STK39Q9UEW8 545 aa8.63□□□□□ -1.03
CDH3-209ENST00000569080 RAPGEFL1Q9UHV5 662 aa8.63□□□□□ -1.03
CDH3-209ENST00000569080 DNM3Q9UQ16 869 aa8.63□□□□□ -1.03
CDH3-209ENST00000569080 MEFVO15553 781 aaPredicted RBP8.62□□□□□ -1.03
CDH3-209ENST00000569080 CXCL14O95715 111 aa8.62□□□□□ -1.03
CDH3-209ENST00000569080 CNPP09543 421 aaKnown RBP8.62□□□□□ -1.03
CDH3-209ENST00000569080 SRGAP2BP0DMP2 458 aa8.62□□□□□ -1.03
CDH3-209ENST00000569080 COL9A1P20849 921 aa8.62□□□□□ -1.03
CDH3-209ENST00000569080 PROZP22891 400 aa8.62□□□□□ -1.03
CDH3-209ENST00000569080 OR1G1P47890 313 aa8.62□□□□□ -1.03
CDH3-209ENST00000569080 CLCN4P51793 760 aa8.62□□□□□ -1.03
CDH3-209ENST00000569080 PEX3P56589 373 aa8.62□□□□□ -1.03
CDH3-209ENST00000569080 DSG1Q02413 1049 aa8.62□□□□□ -1.03
CDH3-209ENST00000569080 PTPAQ15257 358 aa8.62□□□□□ -1.03
CDH3-209ENST00000569080 DCAF4L1Q3SXM0 396 aa8.62□□□□□ -1.03
CDH3-209ENST00000569080 HERC4Q5GLZ8 1057 aaPredicted RBP8.62□□□□□ -1.03
CDH3-209ENST00000569080 FUT10Q6P4F1 479 aa8.62□□□□□ -1.03
CDH3-209ENST00000569080 RNF135Q8IUD6 432 aa8.62□□□□□ -1.03
CDH3-209ENST00000569080 KCTD17Q8N5Z5 321 aa8.62□□□□□ -1.03
CDH3-209ENST00000569080 CEP120Q8N960 986 aa8.62□□□□□ -1.03
CDH3-209ENST00000569080 SYT2Q8N9I0 419 aaPredicted RBP8.62□□□□□ -1.03
CDH3-209ENST00000569080 KCNN1Q92952 543 aa8.62□□□□□ -1.03
CDH3-209ENST00000569080 IFT74Q96LB3 600 aa8.62□□□□□ -1.03
CDH3-209ENST00000569080 AK8Q96MA6 479 aa8.62□□□□□ -1.03
CDH3-209ENST00000569080 DRC1Q96MC2 740 aa8.62□□□□□ -1.03
CDH3-209ENST00000569080 KLHL5Q96PQ7 755 aa8.62□□□□□ -1.03
CDH3-209ENST00000569080 RPS6KC1Q96S38 1066 aa8.62□□□□□ -1.03
CDH3-209ENST00000569080 APOL5Q9BWW9 433 aa8.62□□□□□ -1.03
CDH3-209ENST00000569080 GPR62Q9BZJ7 368 aa8.62□□□□□ -1.03
CDH3-209ENST00000569080 CDT1Q9H211 546 aa8.62□□□□□ -1.03
CDH3-209ENST00000569080 ADAM7Q9H2U9 754 aa8.62□□□□□ -1.03
CDH3-209ENST00000569080 POMKQ9H5K3 350 aa8.62□□□□□ -1.03
CDH3-209ENST00000569080 CHST7Q9NS84 486 aa8.62□□□□□ -1.03
CDH3-209ENST00000569080 BLOC1S4Q9NUP1 217 aa8.62□□□□□ -1.03
CDH3-209ENST00000569080 DZANK1Q9NVP4 752 aa8.62□□□□□ -1.03
CDH3-209ENST00000569080 SNTG2Q9NY99 539 aa8.62□□□□□ -1.03
CDH3-209ENST00000569080 MUTYHQ9UIF7 546 aa8.62□□□□□ -1.03
CDH3-209ENST00000569080 TNFSF13BQ9Y275 285 aa8.62□□□□□ -1.03
CDH3-209ENST00000569080 FAN1Q9Y2M0 1017 aa8.62□□□□□ -1.03
CDH3-209ENST00000569080 MUC6Q6W4X9 2439 aa8.62□□□□□ -1.03
CDH3-209ENST00000569080 CITO14578 2027 aa8.61□□□□□ -1.03
CDH3-209ENST00000569080 VPS37CA5D8V6 355 aaPredicted RBP8.61□□□□□ -1.03
CDH3-209ENST00000569080 TEX28O15482 410 aa8.61□□□□□ -1.03
CDH3-209ENST00000569080 SLC26A4O43511 780 aa8.61□□□□□ -1.03
CDH3-209ENST00000569080 KIF4AO95239 1232 aa8.61□□□□□ -1.03
CDH3-209ENST00000569080 PAPLNO95428 1278 aa8.61□□□□□ -1.03
CDH3-209ENST00000569080 BRD1O95696 1058 aa8.61□□□□□ -1.03
CDH3-209ENST00000569080 ALDH2P05091 517 aa8.61□□□□□ -1.03
CDH3-209ENST00000569080 SSBP05455 408 aaKnown RBP eCLIP8.61□□□□□ -1.03
CDH3-209ENST00000569080 URODP06132 367 aa8.61□□□□□ -1.03
CDH3-209ENST00000569080 ALADP13716 330 aa8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms